Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:07 (2890896): wrapper (7.7.26015): starting
00:10:07 (2890896): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:10:07] Arguments: --nthreads 8
[2025-11-25 00:10:07] Threads: 8
[2025-11-25 00:10:07] Checking for CVMFS
[2025-11-25 00:10:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:10:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:10:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:10:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:10:08] 2.13.2.0 6529 31889 482604 153270 1 738 32710400 40960001 18051 16776704 0 66738015 99.572 77765935 40115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:10:08] CVMFS is ok
[2025-11-25 00:10:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:10:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:10:08] Further information can be found at the LHC@home message board.
[2025-11-25 00:10:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:10:08] Checking for apptainer binary...
[2025-11-25 00:10:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:10:08] Running /usr/bin/apptainer --version
[2025-11-25 00:10:08] apptainer version 1.4.4-1.el9
[2025-11-25 00:10:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:10:09] c-206-36.aglt2.org
[2025-11-25 00:10:09] apptainer works
[2025-11-25 00:10:09] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:10:09] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:10:09] Starting ATLAS job with PandaID=6895386719
[2025-11-25 00:10:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:33:15]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:33:16] 2025-11-27 04:32:26,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:33:16] 2025-11-27 04:32:28,573 | INFO     | time since job start (170482s) is within the limit (172800.0s)
[2025-11-26 23:33:16] 2025-11-27 04:32:29,176 | INFO     | monitor loop #10820: job 0:6895386719 is in state 'finished'
[2025-11-26 23:33:16] 2025-11-27 04:32:29,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:33:16] 2025-11-27 04:32:30,580 | INFO     | time since job start (170484s) is within the limit (172800.0s)
[2025-11-26 23:33:16] 2025-11-27 04:32:31,697 | INFO     | monitor loop #10821: job 0:6895386719 is in state 'finished'
[2025-11-26 23:33:16] 2025-11-27 04:32:31,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:33:16] 2025-11-27 04:32:31,970 | INFO     | PID=2899763 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 23:33:16] 2025-11-27 04:32:31,970 | INFO     | .. there are 19 such processes running
[2025-11-26 23:33:16] 2025-11-27 04:32:32,091 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:33:16] 2025-11-27 04:32:32,095 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3201.073609374999
[2025-11-26 23:33:16] 2025-11-27 04:32:32,106 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895386719/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:33:16] 2025-11-27 04:32:32,107 | INFO     | extracted standard info from prmon json
[2025-11-26 23:33:16] 2025-11-27 04:32:32,107 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:33:16] 2025-11-27 04:32:32,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:33:16] 2025-11-27 04:32:32,143 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:33:16] 2025-11-27 04:32:32,145 | INFO     | sum of square deviations: 6756066478590.191
[2025-11-26 23:33:16] 2025-11-27 04:32:32,273 | INFO     | sum of deviations: 17234818256398.672
[2025-11-26 23:33:16] 2025-11-27 04:32:32,273 | INFO     | mean x: 1764132725.4951665
[2025-11-26 23:33:16] 2025-11-27 04:32:32,273 | INFO     | mean y: 2949494.5331185106
[2025-11-26 23:33:16] 2025-11-27 04:32:32,274 | INFO     | intersect: -4497377285.913104
[2025-11-26 23:33:16] 2025-11-27 04:32:32,276 | INFO     | chi2: 11.46991820478671
[2025-11-26 23:33:16] 2025-11-27 04:32:32,279 | INFO     | sum of square deviations: 6719848970843.987
[2025-11-26 23:33:16] 2025-11-27 04:32:32,429 | INFO     | sum of deviations: 18229277241439.746
[2025-11-26 23:33:16] 2025-11-27 04:32:32,430 | INFO     | mean x: 1764132572.997848
[2025-11-26 23:33:16] 2025-11-27 04:32:32,430 | INFO     | mean y: 2953681.788020086
[2025-11-26 23:33:16] 2025-11-27 04:32:32,430 | INFO     | intersect: -4782698779.057864
[2025-11-26 23:33:16] 2025-11-27 04:32:32,432 | INFO     | chi2: 8.099240561290806
[2025-11-26 23:33:16] 2025-11-27 04:32:32,432 | INFO     | current chi2=8.099240561290806 (change=29.38711142760572 %)
[2025-11-26 23:33:16] 2025-11-27 04:32:32,435 | INFO     | sum of square deviations: 6683761139947.751
[2025-11-26 23:33:16] 2025-11-27 04:32:32,603 | INFO     | sum of deviations: 18739189604114.707
[2025-11-26 23:33:16] 2025-11-27 04:32:32,603 | INFO     | mean x: 1764132420.500539
[2025-11-26 23:33:16] 2025-11-27 04:32:32,603 | INFO     | mean y: 2955836.5407833275
[2025-11-26 23:33:16] 2025-11-27 04:32:32,603 | INFO     | intersect: -4943123357.842853
[2025-11-26 23:33:16] 2025-11-27 04:32:32,605 | INFO     | chi2: 7.052823021582925
[2025-11-26 23:33:16] 2025-11-27 04:32:32,606 | INFO     | current chi2=7.052823021582925 (change=12.919946404717106 %)
[2025-11-26 23:33:16] 2025-11-27 04:32:32,606 | INFO     | right removable region: 2782
[2025-11-26 23:33:16] 2025-11-27 04:32:32,608 | INFO     | sum of square deviations: 6719846763867.971
[2025-11-26 23:33:16] 2025-11-27 04:32:32,759 | INFO     | sum of deviations: 16546294455306.205
[2025-11-26 23:33:16] 2025-11-27 04:32:32,759 | INFO     | mean x: 1764132877.9971306
[2025-11-26 23:33:16] 2025-11-27 04:32:32,759 | INFO     | mean y: 2952392.0286944048
[2025-11-26 23:33:16] 2025-11-27 04:32:32,759 | INFO     | intersect: -4340876133.136291
[2025-11-26 23:33:16] 2025-11-27 04:32:32,761 | INFO     | chi2: 9.691424565665036
[2025-11-26 23:33:16] 2025-11-27 04:32:32,762 | INFO     | current chi2=9.691424565665036 (change=15.505722075502334 %)
[2025-11-26 23:33:16] 2025-11-27 04:32:32,762 | INFO     | left removable region: 10
[2025-11-26 23:33:16] 2025-11-27 04:32:32,764 | INFO     | sum of square deviations: 6604819320346.964
[2025-11-26 23:33:16] 2025-11-27 04:32:32,929 | INFO     | sum of deviations: 17840356813575.05
[2025-11-26 23:33:16] 2025-11-27 04:32:32,931 | INFO     | mean x: 1764132695.0039682
[2025-11-26 23:33:16] 2025-11-27 04:32:32,931 | INFO     | mean y: 2960378.8095238097
[2025-11-26 23:33:16] 2025-11-27 04:32:32,931 | INFO     | intersect: -4762159637.177717
[2025-11-26 23:33:16] 2025-11-27 04:32:32,933 | INFO     | chi2: 4.970673119417626
[2025-11-26 23:33:16] 2025-11-27 04:32:32,933 | INFO     | current memory leak: 2.70 B/s (using 2772 data points, chi2=4.97)
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | could have reported an average CPU frequency of 3213 MHz (96 samples)
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | ..............................
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . Timing measurements:
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . get job = 0 s
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . initial setup = 5 s
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . payload setup = 16 s
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . stage-in = 0 s
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . payload execution = 170371 s
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . stage-out = 4 s
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | . log creation = 1 s
[2025-11-26 23:33:16] 2025-11-27 04:32:32,934 | INFO     | ..............................
[2025-11-26 23:33:16] 2025-11-27 04:32:32,977 | INFO     | time since job start (170486s) is within the limit (172800.0s)
[2025-11-26 23:33:16] 2025-11-27 04:32:33,013 | INFO     | 
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | job summary report
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | --------------------------------------------------
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | PanDA job id: 6895386719
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | task id: 47556149
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | errors: (none)
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | pilot state: finished 
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | transexitcode: 0
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | exeerrorcode: 0
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | exeerrordiag: 
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | exitcode: 0
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | exitmsg: OK
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | cpuconsumptiontime: 201400 s
[2025-11-26 23:33:16] 2025-11-27 04:32:33,014 | INFO     | nevents: 1000
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | neventsw: 0
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | pid: 2928090
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | pgrp: 2928090
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | corecount: 8
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | event service: False
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | sizes: {0: 2283482, 1: 2284338, 2: 2284366, 13: 2284366, 23: 2284422, 34: 2284450, 38: 2284868, 45: 2284896, 170391: 2389903, 170396: 2398902, 170397: 2398958, 170
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | --------------------------------------------------
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | 
[2025-11-26 23:33:16] 2025-11-27 04:32:33,015 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 23:33:16] 2025-11-27 04:32:33,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:33:16] 2025-11-27 04:32:33,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:33:16] 2025-11-27 04:32:33,188 | INFO     | job 6895386719 has completed (purged errors)
[2025-11-26 23:33:16] 2025-11-27 04:32:33,188 | INFO     | overall cleanup function is called
[2025-11-26 23:33:16] 2025-11-27 04:32:34,332 | INFO     | --- collectZombieJob: --- 10, [2928090]
[2025-11-26 23:33:16] 2025-11-27 04:32:34,332 | INFO     | zombie collector waiting for pid 2928090
[2025-11-26 23:33:16] 2025-11-27 04:32:34,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:33:16] 2025-11-27 04:32:34,332 | INFO     | collected zombie processes
[2025-11-26 23:33:16] 2025-11-27 04:32:34,332 | INFO     | will attempt to kill all subprocesses of pid=2928090
[2025-11-26 23:33:16] 2025-11-27 04:32:34,724 | INFO     | process IDs to be killed: [2928090] (in reverse order)
[2025-11-26 23:33:16] 2025-11-27 04:32:34,917 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:33:16] 2025-11-27 04:32:34,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:33:16] 2025-11-27 04:32:34,944 | INFO     | did not find any defunct processes belonging to 2928090
[2025-11-26 23:33:16] 2025-11-27 04:32:34,959 | INFO     | did not find any defunct processes belonging to 2928090
[2025-11-26 23:33:16] 2025-11-27 04:32:34,960 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:33:16] 2025-11-27 04:32:34,960 | INFO     | ready for new job
[2025-11-26 23:33:16] 2025-11-27 04:32:34,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:33:16] 2025-11-27 04:32:34,972 | INFO     | ***************************************
[2025-11-26 23:33:16] 2025-11-27 04:32:34,974 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:33:16] 2025-11-27 04:32:34,974 | INFO     | ***************************************
[2025-11-26 23:33:16] 2025-11-27 04:32:34,974 | INFO     | 
[2025-11-26 23:33:16] 2025-11-27 04:32:34,977 | INFO     | architecture information:
[2025-11-26 23:33:16] 2025-11-27 04:32:34,978 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:33:16] 2025-11-27 04:32:35,009 | INFO     | cat /etc/os-release:
[2025-11-26 23:33:16] NAME="CentOS Linux"
[2025-11-26 23:33:16] VERSION="7 (Core)"
[2025-11-26 23:33:16] ID="centos"
[2025-11-26 23:33:16] ID_LIKE="rhel fedora"
[2025-11-26 23:33:16] VERSION_ID="7"
[2025-11-26 23:33:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:33:16] ANSI_COLOR="0;31"
[2025-11-26 23:33:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:33:16] HOME_URL="https://www.centos.org/"
[2025-11-26 23:33:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:33:16] 
[2025-11-26 23:33:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:33:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:33:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:33:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:33:16] 
[2025-11-26 23:33:16] 2025-11-27 04:32:35,010 | INFO     | ***************************************
[2025-11-26 23:33:16] 2025-11-27 04:32:35,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 23:33:16] 2025-11-27 04:32:35,656 | INFO     | sufficient remaining disk space (79767273472 B)
[2025-11-26 23:33:16] 2025-11-27 04:32:35,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:33:16] 2025-11-27 04:32:35,656 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:33:16] 2025-11-27 04:32:35,657 | INFO     | update_server=False
[2025-11-26 23:33:16] 2025-11-27 04:32:35,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:33:16] 2025-11-27 04:32:35,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:33:16] 2025-11-27 04:32:35,657 | INFO     | aborting loop
[2025-11-26 23:33:16] 2025-11-27 04:32:35,851 | INFO     | all data control threads have been joined
[2025-11-26 23:33:16] 2025-11-27 04:32:36,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:33:16] 2025-11-27 04:32:36,516 | INFO     | all job control threads have been joined
[2025-11-26 23:33:16] 2025-11-27 04:32:36,665 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:36,665 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:36,857 | INFO     | [data] control thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,019 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,025 | INFO     | all payload control threads have been joined
[2025-11-26 23:33:16] 2025-11-27 04:32:37,033 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,130 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,491 | INFO     | [job] validate thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,522 | INFO     | [job] control thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,627 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,697 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:37,742 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:38,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:33:16] 2025-11-27 04:32:38,031 | INFO     | [payload] control thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:38,084 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:38,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:33:16] 2025-11-27 04:32:39,038 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:32:42,282 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:33:16] 2025-11-27 04:33:06,550 | INFO     | PID=2899763 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:33:16] 2025-11-27 04:33:06,550 | INFO     | .. there are 19 such processes running
[2025-11-26 23:33:16] 2025-11-27 04:33:06,551 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:33:16] 2025-11-27 04:33:06,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:33:16] 2025-11-27 04:33:06,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:33:16] 2025-11-27 04:33:09,334 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:33:16] 2025-11-27 04:33:10,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665444300608)>', '<ExcThread(monitor, started 140665103034112)>']
[2025-11-26 23:33:16] 2025-11-27 04:33:10,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:33:16] 2025-11-27 04:33:10,577 | INFO     | [monitor] control thread has ended
[2025-11-26 23:33:16] 2025-11-27 04:33:15,278 | INFO     | all workflow threads have been joined
[2025-11-26 23:33:16] 2025-11-27 04:33:15,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:33:16] 2025-11-27 04:33:15,278 | INFO     | traces error code: 0
[2025-11-26 23:33:16] 2025-11-27 04:33:15,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:33:16] 2025-11-27 04:33:15,410 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:33:16] 2025-11-27 04:33:15,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:33:16] 2025-11-27 04:33:15,416 [wrapper] pilotpid: 2899763
[2025-11-26 23:33:16] 2025-11-27 04:33:15,419 [wrapper] Pilot exit status: 0
[2025-11-26 23:33:16] 2025-11-27 04:33:15,448 [wrapper] pandaids: 6895386719
[2025-11-26 23:33:16] 2025-11-27 04:33:15,527 [wrapper] cleanup supervisor_pilot 2075118 2899764
[2025-11-26 23:33:16] 2025-11-27 04:33:15,531 [wrapper] Test setup, not cleaning
[2025-11-26 23:33:16] 2025-11-27 04:33:15,534 [wrapper] apfmon messages muted
[2025-11-26 23:33:16] 2025-11-27 04:33:15,537 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:33:16] 2025-11-27 04:33:15,539 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:33:16]  *** Error codes and diagnostics ***
[2025-11-26 23:33:16]     "exeErrorCode": 0,
[2025-11-26 23:33:16]     "exeErrorDiag": "",
[2025-11-26 23:33:16]     "pilotErrorCode": 0,
[2025-11-26 23:33:16]     "pilotErrorDiag": "",
[2025-11-26 23:33:16]  *** Listing of results directory ***
[2025-11-26 23:33:16] total 1339036
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-26 23:33:16] -rwx------. 1 boincer umatlas     36292 Nov 24 00:52 runpilot2-wrapper.sh
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:52 queuedata.json
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:33:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:10 run_atlas
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:10 job.xml
[2025-11-26 23:33:16] -rw-r--r--. 2 boincer umatlas 408424763 Nov 25 00:10 EVNT.47483658._001251.pool.root.1
[2025-11-26 23:33:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 23:33:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:10 shared
[2025-11-26 23:33:16] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:10 input.tar.gz
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:10 boinc_lockfile
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:10 pandaJob.out
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas        57 Nov 25 00:10 setup.sh.local
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas    991801 Nov 25 00:11 agis_schedconf.cvmfs.json
[2025-11-26 23:33:16] drwx------. 5 boincer umatlas      4096 Nov 25 00:11 pilot3
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas       534 Nov 26 22:48 boinc_task_state.xml
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas      6903 Nov 26 23:27 init_data.xml
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas 907517184 Nov 26 23:30 HITS.47556149._002379.pool.root.1
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas      1068 Nov 26 23:32 memory_monitor_summary.json
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas   3470281 Nov 26 23:32 log.47556149._002379.job.log.tgz.1
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas      8615 Nov 26 23:32 heartbeat.json
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas        95 Nov 26 23:33 pilot_heartbeat.json
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas        30 Nov 26 23:33 wrapper_checkpoint.txt
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:33 boinc_mmap_file
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas      4824 Nov 26 23:33 pilotlog.txt
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas  22182054 Nov 26 23:33 log.47556149._002379.job.log.1
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas       353 Nov 26 23:33 output.list
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:33 runtime_log
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas  25671680 Nov 26 23:33 result.tar.gz
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas       669 Nov 26 23:33 s6fNDmofeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvULKDmqD5Jhn.diag
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas      9344 Nov 26 23:33 runtime_log.err
[2025-11-26 23:33:16] -rw-r--r--. 1 boincer umatlas     21682 Nov 26 23:33 stderr.txt
[2025-11-26 23:33:16] HITS file was successfully produced:
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas 907517184 Nov 26 23:30 shared/HITS.pool.root.1
[2025-11-26 23:33:16]  *** Contents of shared directory: ***
[2025-11-26 23:33:16] total 1310780
[2025-11-26 23:33:16] -rw-r--r--. 2 boincer umatlas 408424763 Nov 25 00:10 ATLAS.root_0
[2025-11-26 23:33:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 23:33:16] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:10 input.tar.gz
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas 907517184 Nov 26 23:30 HITS.pool.root.1
[2025-11-26 23:33:16] -rw-------. 1 boincer umatlas  25671680 Nov 26 23:33 result.tar.gz
23:33:17 (2890896): run_atlas exited; CPU time 203091.657119
23:33:17 (2890896): called boinc_finish(0)

</stderr_txt>
]]>

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