Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:35:46 (3663448): wrapper (7.7.26015): starting
19:35:46 (3663448): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 19:35:46] Arguments: --nthreads 8
[2025-11-25 19:35:46] Threads: 8
[2025-11-25 19:35:46] Checking for CVMFS
[2025-11-25 19:35:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:35:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:35:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:35:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:35:48] 2.13.3.0 11600 29290 355320 153303 1 551 23573001 32935936 21773 16776704 0 116838909 99.593 118564343 38914 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:35:48] CVMFS is ok
[2025-11-25 19:35:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:35:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:35:48] Further information can be found at the LHC@home message board.
[2025-11-25 19:35:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:35:48] Checking for apptainer binary...
[2025-11-25 19:35:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:35:48] Running /usr/bin/apptainer --version
[2025-11-25 19:35:48] apptainer version 1.4.4-1.el9
[2025-11-25 19:35:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:35:49] c6-2-29-4.aglt2.org
[2025-11-25 19:35:49] apptainer works
[2025-11-25 19:35:49] Set ATHENA_PROC_NUMBER=8
[2025-11-25 19:35:49] Set ATHENA_CORE_NUMBER=8
[2025-11-25 19:35:49] Starting ATLAS job with PandaID=6895386579
[2025-11-25 19:35:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:03:19]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:03:19] 2025-11-26 22:02:39,220 | INFO     | time since job start (77145s) is within the limit (172800.0s)
[2025-11-26 17:03:19] 2025-11-26 22:02:39,508 | INFO     | monitor loop #4723: job 0:6895386579 is in state 'finished'
[2025-11-26 17:03:19] 2025-11-26 22:02:39,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:03:19] 2025-11-26 22:02:40,765 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:03:19] 2025-11-26 22:02:40,775 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2985.365660714286
[2025-11-26 17:03:19] 2025-11-26 22:02:40,788 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895386579/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:03:19] 2025-11-26 22:02:40,789 | INFO     | extracted standard info from prmon json
[2025-11-26 17:03:19] 2025-11-26 22:02:40,789 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:03:19] 2025-11-26 22:02:40,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:03:19] 2025-11-26 22:02:40,831 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:03:19] 2025-11-26 22:02:40,833 | INFO     | sum of square deviations: 623193819465.0753
[2025-11-26 17:03:19] 2025-11-26 22:02:40,881 | INFO     | sum of deviations: 5315476450049.228
[2025-11-26 17:03:19] 2025-11-26 22:02:40,882 | INFO     | mean x: 1764156039.7820919
[2025-11-26 17:03:19] 2025-11-26 22:02:40,882 | INFO     | mean y: 2886111.1426307447
[2025-11-26 17:03:19] 2025-11-26 22:02:40,882 | INFO     | intersect: -15044326474.69935
[2025-11-26 17:03:19] 2025-11-26 22:02:40,883 | INFO     | chi2: 13.84961810987445
[2025-11-26 17:03:19] 2025-11-26 22:02:40,885 | INFO     | sum of square deviations: 615816224611.4318
[2025-11-26 17:03:19] 2025-11-26 22:02:40,914 | INFO     | sum of deviations: 5723763122825.748
[2025-11-26 17:03:19] 2025-11-26 22:02:40,914 | INFO     | mean x: 1764155887.2911694
[2025-11-26 17:03:19] 2025-11-26 22:02:40,914 | INFO     | mean y: 2894550.4105011933
[2025-11-26 17:03:19] 2025-11-26 22:02:40,914 | INFO     | intersect: -16394222003.257
[2025-11-26 17:03:19] 2025-11-26 22:02:40,916 | INFO     | chi2: 10.94053307045541
[2025-11-26 17:03:19] 2025-11-26 22:02:40,916 | INFO     | current chi2=10.94053307045541 (change=21.004803282950675 %)
[2025-11-26 17:03:19] 2025-11-26 22:02:40,916 | INFO     | right removable region: 1256
[2025-11-26 17:03:19] 2025-11-26 22:02:40,917 | INFO     | sum of square deviations: 615814467811.4327
[2025-11-26 17:03:19] 2025-11-26 22:02:40,947 | INFO     | sum of deviations: 4782104677208.441
[2025-11-26 17:03:19] 2025-11-26 22:02:40,947 | INFO     | mean x: 1764156192.2911694
[2025-11-26 17:03:19] 2025-11-26 22:02:40,947 | INFO     | mean y: 2897133.4988066824
[2025-11-26 17:03:19] 2025-11-26 22:02:40,948 | INFO     | intersect: -13696650407.929081
[2025-11-26 17:03:19] 2025-11-26 22:02:40,949 | INFO     | chi2: 9.170443217494539
[2025-11-26 17:03:19] 2025-11-26 22:02:40,949 | INFO     | current chi2=9.170443217494539 (change=33.7855878426263 %)
[2025-11-26 17:03:19] 2025-11-26 22:02:40,950 | INFO     | sum of square deviations: 608493582370.0798
[2025-11-26 17:03:19] 2025-11-26 22:02:40,979 | INFO     | sum of deviations: 4322818328686.7905
[2025-11-26 17:03:19] 2025-11-26 22:02:40,979 | INFO     | mean x: 1764156344.8003194
[2025-11-26 17:03:19] 2025-11-26 22:02:40,979 | INFO     | mean y: 2906700.9992012777
[2025-11-26 17:03:19] 2025-11-26 22:02:40,980 | INFO     | intersect: -12529891676.70625
[2025-11-26 17:03:19] 2025-11-26 22:02:40,981 | INFO     | chi2: 5.875303145841263
[2025-11-26 17:03:19] 2025-11-26 22:02:40,981 | INFO     | current chi2=5.875303145841263 (change=35.93217899618097 %)
[2025-11-26 17:03:19] 2025-11-26 22:02:40,982 | INFO     | sum of square deviations: 601230930578.5164
[2025-11-26 17:03:19] 2025-11-26 22:02:41,014 | INFO     | sum of deviations: 3998912810129.0767
[2025-11-26 17:03:19] 2025-11-26 22:02:41,014 | INFO     | mean x: 1764156497.309543
[2025-11-26 17:03:19] 2025-11-26 22:02:41,014 | INFO     | mean y: 2913501.699278268
[2025-11-26 17:03:19] 2025-11-26 22:02:41,014 | INFO     | intersect: -11730860756.014631
[2025-11-26 17:03:19] 2025-11-26 22:02:41,016 | INFO     | chi2: 4.4204288284017
[2025-11-26 17:03:19] 2025-11-26 22:02:41,016 | INFO     | current chi2=4.4204288284017 (change=24.762540439626026 %)
[2025-11-26 17:03:19] 2025-11-26 22:02:41,016 | INFO     | left removable region: 30
[2025-11-26 17:03:19] 2025-11-26 22:02:41,017 | INFO     | sum of square deviations: 571365398158.4286
[2025-11-26 17:03:19] 2025-11-26 22:02:41,044 | INFO     | sum of deviations: 4204665943995.765
[2025-11-26 17:03:19] 2025-11-26 22:02:41,044 | INFO     | mean x: 1764156771.7969005
[2025-11-26 17:03:19] 2025-11-26 22:02:41,045 | INFO     | mean y: 2931033.9910277324
[2025-11-26 17:03:19] 2025-11-26 22:02:41,045 | INFO     | intersect: -12979461533.273176
[2025-11-26 17:03:19] 2025-11-26 22:02:41,046 | INFO     | chi2: 0.371233713397924
[2025-11-26 17:03:19] 2025-11-26 22:02:41,046 | INFO     | current memory leak: 7.36 B/s (using 1226 data points, chi2=0.37)
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | could have reported an average CPU frequency of 2922 MHz (46 samples)
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | ..............................
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . Timing measurements:
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . get job = 0 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . initial setup = 5 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . payload setup = 48 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . stage-in = 0 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . payload execution = 76990 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . stage-out = 10 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | . log creation = 1 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,048 | INFO     | ..............................
[2025-11-26 17:03:19] 2025-11-26 22:02:41,137 | INFO     | 
[2025-11-26 17:03:19] 2025-11-26 22:02:41,137 | INFO     | job summary report
[2025-11-26 17:03:19] 2025-11-26 22:02:41,138 | INFO     | --------------------------------------------------
[2025-11-26 17:03:19] 2025-11-26 22:02:41,138 | INFO     | PanDA job id: 6895386579
[2025-11-26 17:03:19] 2025-11-26 22:02:41,138 | INFO     | task id: 47556149
[2025-11-26 17:03:19] 2025-11-26 22:02:41,138 | INFO     | errors: (none)
[2025-11-26 17:03:19] 2025-11-26 22:02:41,138 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:03:19] 2025-11-26 22:02:41,138 | INFO     | pilot state: finished 
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | transexitcode: 0
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | exeerrorcode: 0
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | exeerrordiag: 
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | exitcode: 0
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | exitmsg: OK
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | cpuconsumptiontime: 244668 s
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | nevents: 1000
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | neventsw: 0
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | pid: 3684106
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | pgrp: 3684106
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | corecount: 8
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | event service: False
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284342, 23: 2284370, 34: 2284688, 45: 2284688, 77043: 2345010, 77053: 2354278, 77056: 2354334, 77069: 2354358}
[2025-11-26 17:03:19] 2025-11-26 22:02:41,139 | INFO     | --------------------------------------------------
[2025-11-26 17:03:19] 2025-11-26 22:02:41,140 | INFO     | 
[2025-11-26 17:03:19] 2025-11-26 22:02:41,140 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 17:03:19] 2025-11-26 22:02:41,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | job 6895386579 has completed (purged errors)
[2025-11-26 17:03:19] 2025-11-26 22:02:41,166 | INFO     | overall cleanup function is called
[2025-11-26 17:03:19] 2025-11-26 22:02:42,217 | INFO     | --- collectZombieJob: --- 10, [3684106]
[2025-11-26 17:03:19] 2025-11-26 22:02:42,217 | INFO     | zombie collector waiting for pid 3684106
[2025-11-26 17:03:19] 2025-11-26 22:02:42,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:03:19] 2025-11-26 22:02:42,217 | INFO     | collected zombie processes
[2025-11-26 17:03:19] 2025-11-26 22:02:42,217 | INFO     | will attempt to kill all subprocesses of pid=3684106
[2025-11-26 17:03:19] 2025-11-26 22:02:42,633 | INFO     | process IDs to be killed: [3684106] (in reverse order)
[2025-11-26 17:03:19] 2025-11-26 22:02:42,809 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:03:19] 2025-11-26 22:02:42,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:03:19] 2025-11-26 22:02:42,830 | INFO     | did not find any defunct processes belonging to 3684106
[2025-11-26 17:03:19] 2025-11-26 22:02:42,846 | INFO     | did not find any defunct processes belonging to 3684106
[2025-11-26 17:03:19] 2025-11-26 22:02:42,847 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:03:19] 2025-11-26 22:02:42,847 | INFO     | ready for new job
[2025-11-26 17:03:19] 2025-11-26 22:02:42,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:03:19] 2025-11-26 22:02:42,854 | INFO     | ***************************************
[2025-11-26 17:03:19] 2025-11-26 22:02:42,854 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:03:19] 2025-11-26 22:02:42,854 | INFO     | ***************************************
[2025-11-26 17:03:19] 2025-11-26 22:02:42,854 | INFO     | 
[2025-11-26 17:03:19] 2025-11-26 22:02:42,857 | INFO     | architecture information:
[2025-11-26 17:03:19] 2025-11-26 22:02:42,858 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:03:19] 2025-11-26 22:02:42,882 | INFO     | cat /etc/os-release:
[2025-11-26 17:03:19] NAME="CentOS Linux"
[2025-11-26 17:03:19] VERSION="7 (Core)"
[2025-11-26 17:03:19] ID="centos"
[2025-11-26 17:03:19] ID_LIKE="rhel fedora"
[2025-11-26 17:03:19] VERSION_ID="7"
[2025-11-26 17:03:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:03:19] ANSI_COLOR="0;31"
[2025-11-26 17:03:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:03:19] HOME_URL="https://www.centos.org/"
[2025-11-26 17:03:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:03:19] 
[2025-11-26 17:03:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:03:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:03:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:03:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:03:19] 
[2025-11-26 17:03:19] 2025-11-26 22:02:42,884 | INFO     | ***************************************
[2025-11-26 17:03:19] 2025-11-26 22:02:43,388 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 17:03:19] 2025-11-26 22:02:43,412 | INFO     | sufficient remaining disk space (71260176384 B)
[2025-11-26 17:03:19] 2025-11-26 22:02:43,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:03:19] 2025-11-26 22:02:43,413 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:03:19] 2025-11-26 22:02:43,413 | INFO     | update_server=False
[2025-11-26 17:03:19] 2025-11-26 22:02:43,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:03:19] 2025-11-26 22:02:43,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:03:19] 2025-11-26 22:02:43,414 | INFO     | aborting loop
[2025-11-26 17:03:19] 2025-11-26 22:02:43,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:03:19] 2025-11-26 22:02:43,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:03:19] 2025-11-26 22:02:43,601 | INFO     | all payload control threads have been joined
[2025-11-26 17:03:19] 2025-11-26 22:02:43,796 | INFO     | all job control threads have been joined
[2025-11-26 17:03:19] 2025-11-26 22:02:44,275 | INFO     | all data control threads have been joined
[2025-11-26 17:03:19] 2025-11-26 22:02:44,418 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:44,419 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:44,607 | INFO     | [payload] control thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:44,771 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:44,801 | INFO     | [job] control thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,244 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,281 | INFO     | [data] control thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,309 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,454 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,583 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,696 | INFO     | [job] validate thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,802 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,854 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:45,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:46,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:03:19] 2025-11-26 22:02:47,159 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:02:47,421 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:03:19] 2025-11-26 22:03:12,842 | INFO     | PID=3668771 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:03:19] 2025-11-26 22:03:12,842 | INFO     | .. there are 30 such processes running
[2025-11-26 17:03:19] 2025-11-26 22:03:12,844 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:03:19] 2025-11-26 22:03:12,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:03:19] 2025-11-26 22:03:12,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:03:19] 2025-11-26 22:03:13,769 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:03:19] 2025-11-26 22:03:14,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836151781184)>', '<ExcThread(monitor, started 139835654260480)>']
[2025-11-26 17:03:19] 2025-11-26 22:03:14,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:03:19] 2025-11-26 22:03:14,854 | INFO     | [monitor] control thread has ended
[2025-11-26 17:03:19] 2025-11-26 22:03:19,263 | INFO     | all workflow threads have been joined
[2025-11-26 17:03:19] 2025-11-26 22:03:19,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:03:19] 2025-11-26 22:03:19,264 | INFO     | traces error code: 0
[2025-11-26 17:03:19] 2025-11-26 22:03:19,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:03:19] 2025-11-26 22:03:19,491 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:03:19] 2025-11-26 22:03:19,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:03:19] 2025-11-26 22:03:19,499 [wrapper] pilotpid: 3668771
[2025-11-26 17:03:19] 2025-11-26 22:03:19,507 [wrapper] Pilot exit status: 0
[2025-11-26 17:03:19] 2025-11-26 22:03:19,536 [wrapper] pandaids: 6895386579
[2025-11-26 17:03:19] 2025-11-26 22:03:19,664 [wrapper] cleanup supervisor_pilot 3891254 3668772
[2025-11-26 17:03:19] 2025-11-26 22:03:19,670 [wrapper] Test setup, not cleaning
[2025-11-26 17:03:19] 2025-11-26 22:03:19,673 [wrapper] apfmon messages muted
[2025-11-26 17:03:19] 2025-11-26 22:03:19,679 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:03:19] 2025-11-26 22:03:19,684 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:03:19]  *** Error codes and diagnostics ***
[2025-11-26 17:03:19]     "exeErrorCode": 0,
[2025-11-26 17:03:19]     "exeErrorDiag": "",
[2025-11-26 17:03:19]     "pilotErrorCode": 0,
[2025-11-26 17:03:19]     "pilotErrorDiag": "",
[2025-11-26 17:03:19]  *** Listing of results directory ***
[2025-11-26 17:03:19] total 1322808
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-26 17:03:19] -rwx------. 1 boincer umatlas     36292 Nov 24 00:44 runpilot2-wrapper.sh
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:44 queuedata.json
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:03:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:35 run_atlas
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:35 job.xml
[2025-11-26 17:03:19] -rw-r--r--. 2 boincer umatlas 410097004 Nov 25 19:35 EVNT.47483658._001248.pool.root.1
[2025-11-26 17:03:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:35 shared
[2025-11-26 17:03:19] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 19:35 input.tar.gz
[2025-11-26 17:03:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:35 start_atlas.sh
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:35 boinc_lockfile
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 19:35 pandaJob.out
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas        57 Nov 25 19:35 setup.sh.local
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas    991877 Nov 25 19:36 agis_schedconf.cvmfs.json
[2025-11-26 17:03:19] drwx------. 5 boincer umatlas      4096 Nov 25 19:36 pilot3
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas       533 Nov 26 16:52 boinc_task_state.xml
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 17:01 init_data.xml
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas 916187977 Nov 26 17:01 HITS.47556149._002350.pool.root.1
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas      1058 Nov 26 17:02 memory_monitor_summary.json
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas   2352936 Nov 26 17:02 log.47556149._002350.job.log.tgz.1
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas      8626 Nov 26 17:02 heartbeat.json
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas        95 Nov 26 17:03 pilot_heartbeat.json
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:03 wrapper_checkpoint.txt
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas      4824 Nov 26 17:03 pilotlog.txt
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:03 boinc_mmap_file
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas   9819943 Nov 26 17:03 log.47556149._002350.job.log.1
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas       353 Nov 26 17:03 output.list
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:03 runtime_log
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas  12195840 Nov 26 17:03 result.tar.gz
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas       661 Nov 26 17:03 zscLDmsYeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZULKDmIuIKEn.diag
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 17:03 runtime_log.err
[2025-11-26 17:03:19] -rw-r--r--. 1 boincer umatlas     21362 Nov 26 17:03 stderr.txt
[2025-11-26 17:03:19] HITS file was successfully produced:
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas 916187977 Nov 26 17:01 shared/HITS.pool.root.1
[2025-11-26 17:03:19]  *** Contents of shared directory: ***
[2025-11-26 17:03:19] total 1307716
[2025-11-26 17:03:19] -rw-r--r--. 2 boincer umatlas 410097004 Nov 25 19:35 ATLAS.root_0
[2025-11-26 17:03:19] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 19:35 input.tar.gz
[2025-11-26 17:03:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:35 start_atlas.sh
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas 916187977 Nov 26 17:01 HITS.pool.root.1
[2025-11-26 17:03:19] -rw-------. 1 boincer umatlas  12195840 Nov 26 17:03 result.tar.gz
17:03:21 (3663448): run_atlas exited; CPU time 246470.619000
17:03:21 (3663448): called boinc_finish(0)

</stderr_txt>
]]>

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