Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:58:45 (375500): wrapper (7.7.26015): starting
00:58:45 (375500): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:58:45] Arguments: --nthreads 9
[2025-11-25 00:58:45] Threads: 9
[2025-11-25 00:58:45] Checking for CVMFS
[2025-11-25 00:58:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:58:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:58:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:58:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:58:46] 2.13.3.0 9702 28222 323256 153272 3 328 22454679 32935937 26012 16776704 0 144700798 99.699 103487613 32944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:58:46] CVMFS is ok
[2025-11-25 00:58:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:58:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:58:46] Further information can be found at the LHC@home message board.
[2025-11-25 00:58:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:58:46] Checking for apptainer binary...
[2025-11-25 00:58:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:58:46] Running /usr/bin/apptainer --version
[2025-11-25 00:58:46] apptainer version 1.4.4-1.el9
[2025-11-25 00:58:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:58:46] c-4-37.aglt2.org
[2025-11-25 00:58:46] apptainer works
[2025-11-25 00:58:46] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:58:46] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:58:47] Starting ATLAS job with PandaID=6895386596
[2025-11-25 00:58:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:58:17]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:58:17] 2025-11-26 00:57:25,249 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:58:17] 2025-11-26 00:57:25,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:58:17] 2025-11-26 00:57:25,304 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:58:17] 2025-11-26 00:57:25,306 | INFO     | sum of square deviations: 434473656861.13135
[2025-11-25 19:58:17] 2025-11-26 00:57:25,374 | INFO     | sum of deviations: 2772102956471.7183
[2025-11-25 19:58:17] 2025-11-26 00:57:25,374 | INFO     | mean x: 1764084499.1072385
[2025-11-25 19:58:17] 2025-11-26 00:57:25,375 | INFO     | mean y: 3074429.910634495
[2025-11-25 19:58:17] 2025-11-26 00:57:25,375 | INFO     | intersect: -11252438483.739143
[2025-11-25 19:58:17] 2025-11-26 00:57:25,380 | INFO     | chi2: 7.753295305839817
[2025-11-25 19:58:17] 2025-11-26 00:57:25,382 | INFO     | sum of square deviations: 428675907432.4738
[2025-11-25 19:58:17] 2025-11-26 00:57:25,450 | INFO     | sum of deviations: 3193205783219.9688
[2025-11-25 19:58:17] 2025-11-26 00:57:25,451 | INFO     | mean x: 1764084346.6122084
[2025-11-25 19:58:17] 2025-11-26 00:57:25,451 | INFO     | mean y: 3085506.252244165
[2025-11-25 19:58:17] 2025-11-26 00:57:25,451 | INFO     | intersect: -13137574465.587349
[2025-11-25 19:58:17] 2025-11-26 00:57:25,457 | INFO     | chi2: 4.291168677696348
[2025-11-25 19:58:17] 2025-11-26 00:57:25,457 | INFO     | current chi2=4.291168677696348 (change=44.653614902759855 %)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,458 | INFO     | sum of square deviations: 422929972928.76105
[2025-11-25 19:58:17] 2025-11-26 00:57:25,522 | INFO     | sum of deviations: 3405671816911.1963
[2025-11-25 19:58:17] 2025-11-26 00:57:25,529 | INFO     | mean x: 1764084194.1172228
[2025-11-25 19:58:17] 2025-11-26 00:57:25,529 | INFO     | mean y: 3091137.790802525
[2025-11-25 19:58:17] 2025-11-26 00:57:25,530 | INFO     | intersect: -14202314501.727453
[2025-11-25 19:58:17] 2025-11-26 00:57:25,531 | INFO     | chi2: 3.0630571865313088
[2025-11-25 19:58:17] 2025-11-26 00:57:25,531 | INFO     | current chi2=3.0630571865313088 (change=28.619510986557934 %)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,537 | INFO     | sum of square deviations: 417235282548.6918
[2025-11-25 19:58:17] 2025-11-26 00:57:25,573 | INFO     | sum of deviations: 3415653801865.934
[2025-11-25 19:58:17] 2025-11-26 00:57:25,574 | INFO     | mean x: 1764084041.6177535
[2025-11-25 19:58:17] 2025-11-26 00:57:25,574 | INFO     | mean y: 3091403.554347826
[2025-11-25 19:58:17] 2025-11-26 00:57:25,574 | INFO     | intersect: -14438401479.683592
[2025-11-25 19:58:17] 2025-11-26 00:57:25,575 | INFO     | chi2: 3.006809664000085
[2025-11-25 19:58:17] 2025-11-26 00:57:25,576 | INFO     | current chi2=3.006809664000085 (change=1.836319699761134 %)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,576 | INFO     | right removable region: 1103
[2025-11-25 19:58:17] 2025-11-26 00:57:25,578 | INFO     | sum of square deviations: 428675151642.4736
[2025-11-25 19:58:17] 2025-11-26 00:57:25,610 | INFO     | sum of deviations: 2381759992159.0503
[2025-11-25 19:58:17] 2025-11-26 00:57:25,614 | INFO     | mean x: 1764084651.6122084
[2025-11-25 19:58:17] 2025-11-26 00:57:25,614 | INFO     | mean y: 3084690.599640934
[2025-11-25 19:58:17] 2025-11-26 00:57:25,614 | INFO     | intersect: -9798337738.233046
[2025-11-25 19:58:17] 2025-11-26 00:57:25,616 | INFO     | chi2: 4.988086756606299
[2025-11-25 19:58:17] 2025-11-26 00:57:25,616 | INFO     | current chi2=4.988086756606299 (change=35.66494555096786 %)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,618 | INFO     | sum of square deviations: 422928800878.911
[2025-11-25 19:58:17] 2025-11-26 00:57:25,668 | INFO     | sum of deviations: 2292453357314.1733
[2025-11-25 19:58:17] 2025-11-26 00:57:25,668 | INFO     | mean x: 1764084804.112714
[2025-11-25 19:58:17] 2025-11-26 00:57:25,668 | INFO     | mean y: 3087060.0225428315
[2025-11-25 19:58:17] 2025-11-26 00:57:25,668 | INFO     | intersect: -9559000278.013748
[2025-11-25 19:58:17] 2025-11-26 00:57:25,672 | INFO     | chi2: 4.927592992907036
[2025-11-25 19:58:17] 2025-11-26 00:57:25,672 | INFO     | current chi2=4.927592992907036 (change=1.21276486659227 %)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,672 | INFO     | left removable region: 20
[2025-11-25 19:58:17] 2025-11-26 00:57:25,674 | INFO     | sum of square deviations: 393875022415.41974
[2025-11-25 19:58:17] 2025-11-26 00:57:25,712 | INFO     | sum of deviations: 2796371333440.5825
[2025-11-25 19:58:17] 2025-11-26 00:57:25,713 | INFO     | mean x: 1764084621.1237304
[2025-11-25 19:58:17] 2025-11-26 00:57:25,713 | INFO     | mean y: 3107911.8762696213
[2025-11-25 19:58:17] 2025-11-26 00:57:25,713 | INFO     | intersect: -12521259929.532372
[2025-11-25 19:58:17] 2025-11-26 00:57:25,714 | INFO     | chi2: 0.11515718692361165
[2025-11-25 19:58:17] 2025-11-26 00:57:25,715 | INFO     | current memory leak: 7.10 B/s (using 1083 data points, chi2=0.12)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,716 | INFO     | could have reported an average CPU frequency of 2599 MHz (41 samples)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,716 | INFO     | ..............................
[2025-11-25 19:58:17] 2025-11-26 00:57:25,716 | INFO     | . Timing measurements:
[2025-11-25 19:58:17] 2025-11-26 00:57:25,716 | INFO     | . get job = 0 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,716 | INFO     | . initial setup = 3 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,717 | INFO     | . payload setup = 15 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,717 | INFO     | . stage-in = 0 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,717 | INFO     | . payload execution = 68235 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,717 | INFO     | . stage-out = 6 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,717 | INFO     | . log creation = 0 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,717 | INFO     | ..............................
[2025-11-25 19:58:17] 2025-11-26 00:57:25,919 | INFO     | 
[2025-11-25 19:58:17] 2025-11-26 00:57:25,919 | INFO     | job summary report
[2025-11-25 19:58:17] 2025-11-26 00:57:25,919 | INFO     | --------------------------------------------------
[2025-11-25 19:58:17] 2025-11-26 00:57:25,919 | INFO     | PanDA job id: 6895386596
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | task id: 47556161
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | errors: (none)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | pilot state: finished 
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | transexitcode: 0
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | exeerrorcode: 0
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | exeerrordiag: 
[2025-11-25 19:58:17] 2025-11-26 00:57:25,920 | INFO     | exitcode: 0
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | exitmsg: OK
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | cpuconsumptiontime: 300511 s
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | nevents: 1000
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | neventsw: 0
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | pid: 387832
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | pgrp: 387832
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | corecount: 9
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | event service: False
[2025-11-25 19:58:17] 2025-11-26 00:57:25,921 | INFO     | sizes: {0: 2284134, 1: 2284333, 2: 2284361, 10: 2284623, 12: 2284651, 68254: 2341612, 68260: 2350611, 68262: 2350667, 68274: 2351009}
[2025-11-25 19:58:17] 2025-11-26 00:57:25,922 | INFO     | --------------------------------------------------
[2025-11-25 19:58:17] 2025-11-26 00:57:25,922 | INFO     | 
[2025-11-25 19:58:17] 2025-11-26 00:57:25,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 19:58:17] 2025-11-26 00:57:25,992 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | job 6895386596 has completed (purged errors)
[2025-11-25 19:58:17] 2025-11-26 00:57:25,994 | INFO     | overall cleanup function is called
[2025-11-25 19:58:17] 2025-11-26 00:57:27,066 | INFO     | --- collectZombieJob: --- 10, [387832]
[2025-11-25 19:58:17] 2025-11-26 00:57:27,066 | INFO     | zombie collector waiting for pid 387832
[2025-11-25 19:58:17] 2025-11-26 00:57:27,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:58:17] 2025-11-26 00:57:27,066 | INFO     | collected zombie processes
[2025-11-25 19:58:17] 2025-11-26 00:57:27,067 | INFO     | will attempt to kill all subprocesses of pid=387832
[2025-11-25 19:58:17] 2025-11-26 00:57:27,518 | INFO     | process IDs to be killed: [387832] (in reverse order)
[2025-11-25 19:58:17] 2025-11-26 00:57:27,777 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:58:17] 2025-11-26 00:57:27,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:58:17] 2025-11-26 00:57:27,803 | INFO     | did not find any defunct processes belonging to 387832
[2025-11-25 19:58:17] 2025-11-26 00:57:27,819 | INFO     | did not find any defunct processes belonging to 387832
[2025-11-25 19:58:17] 2025-11-26 00:57:27,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:58:17] 2025-11-26 00:57:27,820 | INFO     | ready for new job
[2025-11-25 19:58:17] 2025-11-26 00:57:27,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:58:17] 2025-11-26 00:57:27,825 | INFO     | ***************************************
[2025-11-25 19:58:17] 2025-11-26 00:57:27,826 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:58:17] 2025-11-26 00:57:27,826 | INFO     | ***************************************
[2025-11-25 19:58:17] 2025-11-26 00:57:27,826 | INFO     | 
[2025-11-25 19:58:17] 2025-11-26 00:57:27,828 | INFO     | architecture information:
[2025-11-25 19:58:17] 2025-11-26 00:57:27,828 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:58:17] 2025-11-26 00:57:27,846 | INFO     | cat /etc/os-release:
[2025-11-25 19:58:17] NAME="CentOS Linux"
[2025-11-25 19:58:17] VERSION="7 (Core)"
[2025-11-25 19:58:17] ID="centos"
[2025-11-25 19:58:17] ID_LIKE="rhel fedora"
[2025-11-25 19:58:17] VERSION_ID="7"
[2025-11-25 19:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:58:17] ANSI_COLOR="0;31"
[2025-11-25 19:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:58:17] HOME_URL="https://www.centos.org/"
[2025-11-25 19:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:58:17] 
[2025-11-25 19:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:58:17] 
[2025-11-25 19:58:17] 2025-11-26 00:57:27,846 | INFO     | ***************************************
[2025-11-25 19:58:17] 2025-11-26 00:57:28,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 19:58:17] 2025-11-26 00:57:28,369 | INFO     | sufficient remaining disk space (72758591488 B)
[2025-11-25 19:58:17] 2025-11-26 00:57:28,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:58:17] 2025-11-26 00:57:28,370 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:58:17] 2025-11-26 00:57:28,371 | INFO     | update_server=False
[2025-11-25 19:58:17] 2025-11-26 00:57:28,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:58:17] 2025-11-26 00:57:28,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:58:17] 2025-11-26 00:57:28,371 | INFO     | aborting loop
[2025-11-25 19:58:17] 2025-11-26 00:57:28,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:58:17] 2025-11-26 00:57:28,701 | INFO     | all data control threads have been joined
[2025-11-25 19:58:17] 2025-11-26 00:57:28,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:58:17] 2025-11-26 00:57:29,384 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:29,400 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:29,437 | INFO     | all payload control threads have been joined
[2025-11-25 19:58:17] 2025-11-26 00:57:29,507 | INFO     | all job control threads have been joined
[2025-11-25 19:58:17] 2025-11-26 00:57:29,565 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:29,708 | INFO     | [data] control thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:29,891 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:29,892 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:29,946 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,221 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,405 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,426 | INFO     | [job] validate thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,443 | INFO     | [payload] control thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,513 | INFO     | [job] control thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,555 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:30,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:58:17] 2025-11-26 00:57:31,846 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:32,955 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:58:17] 2025-11-26 00:57:58,133 | INFO     | PID=380611 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 19:58:17] 2025-11-26 00:57:58,134 | INFO     | .. there are 39 such processes running
[2025-11-25 19:58:17] 2025-11-26 00:57:58,134 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:58:17] 2025-11-26 00:57:58,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:58:17] 2025-11-26 00:57:58,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:58:17] 2025-11-26 00:58:10,081 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:58:17] 2025-11-26 00:58:11,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290217871168)>', '<ExcThread(monitor, started 140289712834304)>']
[2025-11-25 19:58:17] 2025-11-26 00:58:12,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:58:17] 2025-11-26 00:58:12,246 | INFO     | [monitor] control thread has ended
[2025-11-25 19:58:17] 2025-11-26 00:58:16,925 | INFO     | all workflow threads have been joined
[2025-11-25 19:58:17] 2025-11-26 00:58:16,925 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:58:17] 2025-11-26 00:58:16,925 | INFO     | traces error code: 0
[2025-11-25 19:58:17] 2025-11-26 00:58:16,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:58:17] 2025-11-26 00:58:17,146 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:58:17] 2025-11-26 00:58:17,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:58:17] 2025-11-26 00:58:17,152 [wrapper] pilotpid: 380611
[2025-11-25 19:58:17] 2025-11-26 00:58:17,154 [wrapper] Pilot exit status: 0
[2025-11-25 19:58:17] 2025-11-26 00:58:17,175 [wrapper] pandaids: 6895386596
[2025-11-25 19:58:17] 2025-11-26 00:58:17,250 [wrapper] cleanup supervisor_pilot  215712 380612
[2025-11-25 19:58:17] 2025-11-26 00:58:17,274 [wrapper] Test setup, not cleaning
[2025-11-25 19:58:17] 2025-11-26 00:58:17,285 [wrapper] apfmon messages muted
[2025-11-25 19:58:17] 2025-11-26 00:58:17,304 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:58:17] 2025-11-26 00:58:17,343 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:58:17]  *** Error codes and diagnostics ***
[2025-11-25 19:58:17]     "exeErrorCode": 0,
[2025-11-25 19:58:17]     "exeErrorDiag": "",
[2025-11-25 19:58:17]     "pilotErrorCode": 0,
[2025-11-25 19:58:17]     "pilotErrorDiag": "",
[2025-11-25 19:58:17]  *** Listing of results directory ***
[2025-11-25 19:58:17] total 1310540
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-25 19:58:17] -rwx------. 1 boincer umatlas     36292 Nov 24 00:44 runpilot2-wrapper.sh
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:44 queuedata.json
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:58:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:58 run_atlas
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:58 job.xml
[2025-11-25 19:58:17] -rw-r--r--. 2 boincer umatlas 408515350 Nov 25 00:58 EVNT.47483658._002022.pool.root.1
[2025-11-25 19:58:17] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 00:58 input.tar.gz
[2025-11-25 19:58:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:58 start_atlas.sh
[2025-11-25 19:58:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:58 shared
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:58 boinc_lockfile
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 00:58 pandaJob.out
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas        57 Nov 25 00:58 setup.sh.local
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas    991801 Nov 25 00:59 agis_schedconf.cvmfs.json
[2025-11-25 19:58:17] drwx------. 5 boincer umatlas      4096 Nov 25 00:59 pilot3
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas       533 Nov 25 19:42 boinc_task_state.xml
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas 907206896 Nov 25 19:56 HITS.47556161._000054.pool.root.1
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas      6661 Nov 25 19:56 init_data.xml
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas      1058 Nov 25 19:57 memory_monitor_summary.json
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas   1516240 Nov 25 19:57 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas   2353166 Nov 25 19:57 log.47556161._000054.job.log.tgz.1
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas      8613 Nov 25 19:57 heartbeat.json
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas        95 Nov 25 19:57 pilot_heartbeat.json
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 19:58 boinc_mmap_file
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas        29 Nov 25 19:58 wrapper_checkpoint.txt
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas      4823 Nov 25 19:58 pilotlog.txt
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas   8817812 Nov 25 19:58 log.47556161._000054.job.log.1
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas       353 Nov 25 19:58 output.list
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas       620 Nov 25 19:58 runtime_log
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas  11192320 Nov 25 19:58 result.tar.gz
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 19:58 runtime_log.err
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas       658 Nov 25 19:58 j6SNDm2Xeh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnwIKDmEv1GDn.diag
[2025-11-25 19:58:17] -rw-r--r--. 1 boincer umatlas     21134 Nov 25 19:58 stderr.txt
[2025-11-25 19:58:17] HITS file was successfully produced:
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas 907206896 Nov 25 19:56 shared/HITS.pool.root.1
[2025-11-25 19:58:17]  *** Contents of shared directory: ***
[2025-11-25 19:58:17] total 1296428
[2025-11-25 19:58:17] -rw-r--r--. 2 boincer umatlas 408515350 Nov 25 00:58 ATLAS.root_0
[2025-11-25 19:58:17] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 00:58 input.tar.gz
[2025-11-25 19:58:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:58 start_atlas.sh
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas 907206896 Nov 25 19:56 HITS.pool.root.1
[2025-11-25 19:58:17] -rw-------. 1 boincer umatlas  11192320 Nov 25 19:58 result.tar.gz
19:58:19 (375500): run_atlas exited; CPU time 302469.538563
19:58:19 (375500): called boinc_finish(0)

</stderr_txt>
]]>

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