Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:51 (148924): wrapper (7.7.26015): starting
00:05:51 (148924): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:05:51] Arguments: --nthreads 9
[2025-11-25 00:05:51] Threads: 9
[2025-11-25 00:05:51] Checking for CVMFS
[2025-11-25 00:05:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:05:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:05:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:05:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:05:52] 2.13.2.0 9514 33845 472948 153270 2 622 38525060 40960001 24975 16776704 0 89080333 99.572 94996887 35930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:05:52] CVMFS is ok
[2025-11-25 00:05:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:05:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:05:52] Further information can be found at the LHC@home message board.
[2025-11-25 00:05:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:05:52] Checking for apptainer binary...
[2025-11-25 00:05:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:05:52] Running /usr/bin/apptainer --version
[2025-11-25 00:05:52] apptainer version 1.4.4-1.el9
[2025-11-25 00:05:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:05:53] c-211-33-3.aglt2.org
[2025-11-25 00:05:53] apptainer works
[2025-11-25 00:05:53] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:05:53] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:05:53] Starting ATLAS job with PandaID=6895386718
[2025-11-25 00:05:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:05:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:05:26] 2025-11-27 02:04:38,841 | INFO     | monitor loop #9308: job 0:6895386718 is in state 'finished'
[2025-11-26 21:05:26] 2025-11-27 02:04:38,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:05:26] 2025-11-27 02:04:39,038 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 21:05:26] 2025-11-27 02:04:39,053 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2726.3043125
[2025-11-26 21:05:26] 2025-11-27 02:04:39,076 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895386718/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:05:26] 2025-11-27 02:04:39,082 | INFO     | extracted standard info from prmon json
[2025-11-26 21:05:26] 2025-11-27 02:04:39,082 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:05:26] 2025-11-27 02:04:39,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:05:26] 2025-11-27 02:04:39,129 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:05:26] 2025-11-27 02:04:39,134 | INFO     | sum of square deviations: 5790105843978.827
[2025-11-26 21:05:26] 2025-11-27 02:04:39,300 | INFO     | sum of deviations: 20822631493181.543
[2025-11-26 21:05:26] 2025-11-27 02:04:39,300 | INFO     | mean x: 1764128159.2363362
[2025-11-26 21:05:26] 2025-11-27 02:04:39,301 | INFO     | mean y: 3097222.892197512
[2025-11-26 21:05:26] 2025-11-27 02:04:39,301 | INFO     | intersect: -6341137503.787739
[2025-11-26 21:05:26] 2025-11-27 02:04:39,304 | INFO     | chi2: 11.584486562692902
[2025-11-26 21:05:26] 2025-11-27 02:04:39,308 | INFO     | sum of square deviations: 5757431915278.765
[2025-11-26 21:05:26] 2025-11-27 02:04:39,460 | INFO     | sum of deviations: 21832949343002.035
[2025-11-26 21:05:26] 2025-11-27 02:04:39,460 | INFO     | mean x: 1764128006.7405589
[2025-11-26 21:05:26] 2025-11-27 02:04:39,460 | INFO     | mean y: 3101938.0392749244
[2025-11-26 21:05:26] 2025-11-27 02:04:39,461 | INFO     | intersect: -6686706638.511281
[2025-11-26 21:05:26] 2025-11-27 02:04:39,464 | INFO     | chi2: 8.089103543720892
[2025-11-26 21:05:26] 2025-11-27 02:04:39,464 | INFO     | current chi2=8.089103543720892 (change=30.17296450779845 %)
[2025-11-26 21:05:26] 2025-11-27 02:04:39,467 | INFO     | sum of square deviations: 5724880990276.102
[2025-11-26 21:05:26] 2025-11-27 02:04:39,610 | INFO     | sum of deviations: 22722333521970.992
[2025-11-26 21:05:26] 2025-11-27 02:04:39,611 | INFO     | mean x: 1764127854.2444193
[2025-11-26 21:05:26] 2025-11-27 02:04:39,611 | INFO     | mean y: 3106103.4566780175
[2025-11-26 21:05:26] 2025-11-27 02:04:39,611 | INFO     | intersect: -6998803900.895655
[2025-11-26 21:05:26] 2025-11-27 02:04:39,614 | INFO     | chi2: 5.127258352900597
[2025-11-26 21:05:26] 2025-11-27 02:04:39,614 | INFO     | current chi2=5.127258352900597 (change=36.615246359646434 %)
[2025-11-26 21:05:26] 2025-11-27 02:04:39,617 | INFO     | sum of square deviations: 5692452513906.35
[2025-11-26 21:05:26] 2025-11-27 02:04:39,784 | INFO     | sum of deviations: 23216445449695.168
[2025-11-26 21:05:26] 2025-11-27 02:04:39,784 | INFO     | mean x: 1764127701.7471569
[2025-11-26 21:05:26] 2025-11-27 02:04:39,784 | INFO     | mean y: 3108426.886277483
[2025-11-26 21:05:26] 2025-11-27 02:04:39,784 | INFO     | intersect: -7191817565.707217
[2025-11-26 21:05:26] 2025-11-27 02:04:39,789 | INFO     | chi2: 4.094957221251164
[2025-11-26 21:05:26] 2025-11-27 02:04:39,789 | INFO     | current chi2=4.094957221251164 (change=20.13358915423949 %)
[2025-11-26 21:05:26] 2025-11-27 02:04:39,789 | INFO     | right removable region: 2637
[2025-11-26 21:05:26] 2025-11-27 02:04:39,796 | INFO     | sum of square deviations: 5757428296148.764
[2025-11-26 21:05:26] 2025-11-27 02:04:40,064 | INFO     | sum of deviations: 19862018187509.652
[2025-11-26 21:05:26] 2025-11-27 02:04:40,065 | INFO     | mean x: 1764128311.7405589
[2025-11-26 21:05:26] 2025-11-27 02:04:40,065 | INFO     | mean y: 3101705.1725830818
[2025-11-26 21:05:26] 2025-11-27 02:04:40,065 | INFO     | intersect: -6082801029.617867
[2025-11-26 21:05:26] 2025-11-27 02:04:40,068 | INFO     | chi2: 8.734659645896784
[2025-11-26 21:05:26] 2025-11-27 02:04:40,069 | INFO     | current chi2=8.734659645896784 (change=24.600373105648064 %)
[2025-11-26 21:05:26] 2025-11-27 02:04:40,069 | INFO     | left removable region: 10
[2025-11-26 21:05:26] 2025-11-27 02:04:40,072 | INFO     | sum of square deviations: 5621537553993.186
[2025-11-26 21:05:26] 2025-11-27 02:04:40,108 | INFO     | time since job start (161893s) is within the limit (172800.0s)
[2025-11-26 21:05:26] 2025-11-27 02:04:40,210 | INFO     | sum of deviations: 21951433585578.598
[2025-11-26 21:05:26] 2025-11-27 02:04:40,210 | INFO     | mean x: 1764127976.250476
[2025-11-26 21:05:26] 2025-11-27 02:04:40,210 | INFO     | mean y: 3115128.958127141
[2025-11-26 21:05:26] 2025-11-27 02:04:40,211 | INFO     | intersect: -6885594185.029396
[2025-11-26 21:05:26] 2025-11-27 02:04:40,214 | INFO     | chi2: 0.718663889132863
[2025-11-26 21:05:26] 2025-11-27 02:04:40,214 | INFO     | current memory leak: 3.90 B/s (using 2627 data points, chi2=0.72)
[2025-11-26 21:05:26] 2025-11-27 02:04:40,216 | INFO     | could have reported an average CPU frequency of 2657 MHz (92 samples)
[2025-11-26 21:05:26] 2025-11-27 02:04:40,216 | INFO     | ..............................
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . Timing measurements:
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . get job = 0 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . initial setup = 4 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . payload setup = 21 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . stage-in = 0 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . payload execution = 161790 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . stage-out = 6 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | . log creation = 1 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,217 | INFO     | ..............................
[2025-11-26 21:05:26] 2025-11-27 02:04:40,313 | INFO     | 
[2025-11-26 21:05:26] 2025-11-27 02:04:40,313 | INFO     | job summary report
[2025-11-26 21:05:26] 2025-11-27 02:04:40,313 | INFO     | --------------------------------------------------
[2025-11-26 21:05:26] 2025-11-27 02:04:40,313 | INFO     | PanDA job id: 6895386718
[2025-11-26 21:05:26] 2025-11-27 02:04:40,313 | INFO     | task id: 47556149
[2025-11-26 21:05:26] 2025-11-27 02:04:40,314 | INFO     | errors: (none)
[2025-11-26 21:05:26] 2025-11-27 02:04:40,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | pilot state: finished 
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | transexitcode: 0
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | exeerrorcode: 0
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | exeerrordiag: 
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | exitcode: 0
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | exitmsg: OK
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | cpuconsumptiontime: 266579 s
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | nevents: 1000
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | neventsw: 0
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | pid: 199302
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | pgrp: 199302
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | corecount: 9
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | event service: False
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284338, 12: 2284366, 19: 2284656, 24: 2284684, 161816: 2383004, 161817: 2383003, 161825: 2392058, 161828: 2392114, 161848: 2392
[2025-11-26 21:05:26] 2025-11-27 02:04:40,315 | INFO     | --------------------------------------------------
[2025-11-26 21:05:26] 2025-11-27 02:04:40,316 | INFO     | 
[2025-11-26 21:05:26] 2025-11-27 02:04:40,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:05:26] 2025-11-27 02:04:40,409 | INFO     | job 6895386718 has completed (purged errors)
[2025-11-26 21:05:26] 2025-11-27 02:04:40,409 | INFO     | overall cleanup function is called
[2025-11-26 21:05:26] 2025-11-27 02:04:41,447 | INFO     | --- collectZombieJob: --- 10, [199302]
[2025-11-26 21:05:26] 2025-11-27 02:04:41,447 | INFO     | zombie collector waiting for pid 199302
[2025-11-26 21:05:26] 2025-11-27 02:04:41,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:05:26] 2025-11-27 02:04:41,448 | INFO     | collected zombie processes
[2025-11-26 21:05:26] 2025-11-27 02:04:41,448 | INFO     | will attempt to kill all subprocesses of pid=199302
[2025-11-26 21:05:26] 2025-11-27 02:04:42,117 | INFO     | process IDs to be killed: [199302] (in reverse order)
[2025-11-26 21:05:26] 2025-11-27 02:04:42,420 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:05:26] 2025-11-27 02:04:42,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:05:26] 2025-11-27 02:04:42,453 | INFO     | did not find any defunct processes belonging to 199302
[2025-11-26 21:05:26] 2025-11-27 02:04:42,489 | INFO     | did not find any defunct processes belonging to 199302
[2025-11-26 21:05:26] 2025-11-27 02:04:42,494 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:05:26] 2025-11-27 02:04:42,494 | INFO     | ready for new job
[2025-11-26 21:05:26] 2025-11-27 02:04:42,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:05:26] 2025-11-27 02:04:42,523 | INFO     | ***************************************
[2025-11-26 21:05:26] 2025-11-27 02:04:42,523 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:05:26] 2025-11-27 02:04:42,523 | INFO     | ***************************************
[2025-11-26 21:05:26] 2025-11-27 02:04:42,523 | INFO     | 
[2025-11-26 21:05:26] 2025-11-27 02:04:42,532 | INFO     | architecture information:
[2025-11-26 21:05:26] 2025-11-27 02:04:42,537 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:05:26] 2025-11-27 02:04:42,561 | INFO     | cat /etc/os-release:
[2025-11-26 21:05:26] NAME="CentOS Linux"
[2025-11-26 21:05:26] VERSION="7 (Core)"
[2025-11-26 21:05:26] ID="centos"
[2025-11-26 21:05:26] ID_LIKE="rhel fedora"
[2025-11-26 21:05:26] VERSION_ID="7"
[2025-11-26 21:05:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:05:26] ANSI_COLOR="0;31"
[2025-11-26 21:05:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:05:26] HOME_URL="https://www.centos.org/"
[2025-11-26 21:05:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:05:26] 
[2025-11-26 21:05:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:05:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:05:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:05:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:05:26] 
[2025-11-26 21:05:26] 2025-11-27 02:04:42,561 | INFO     | ***************************************
[2025-11-26 21:05:26] 2025-11-27 02:04:43,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 21:05:26] 2025-11-27 02:04:43,107 | INFO     | sufficient remaining disk space (122550222848 B)
[2025-11-26 21:05:26] 2025-11-27 02:04:43,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:05:26] 2025-11-27 02:04:43,108 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:05:26] 2025-11-27 02:04:43,108 | INFO     | update_server=False
[2025-11-26 21:05:26] 2025-11-27 02:04:43,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:05:26] 2025-11-27 02:04:43,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:05:26] 2025-11-27 02:04:43,109 | INFO     | aborting loop
[2025-11-26 21:05:26] 2025-11-27 02:04:43,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:05:26] 2025-11-27 02:04:43,120 | INFO     | all payload control threads have been joined
[2025-11-26 21:05:26] 2025-11-27 02:04:43,499 | INFO     | all job control threads have been joined
[2025-11-26 21:05:26] 2025-11-27 02:04:43,744 | INFO     | all data control threads have been joined
[2025-11-26 21:05:26] 2025-11-27 02:04:44,113 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,115 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,140 | INFO     | [payload] control thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:05:26] 2025-11-27 02:04:44,496 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,516 | INFO     | [job] control thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,639 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,670 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,750 | INFO     | [data] control thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,847 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:44,999 | INFO     | [job] validate thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:45,123 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:45,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:45,325 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:45,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:05:26] 2025-11-27 02:04:45,459 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:46,335 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:04:48,484 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:05:26] 2025-11-27 02:05:13,853 | INFO     | PID=166146 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 21:05:26] 2025-11-27 02:05:13,853 | INFO     | .. there are 24 such processes running
[2025-11-26 21:05:26] 2025-11-27 02:05:13,854 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:05:26] 2025-11-27 02:05:13,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:05:26] 2025-11-27 02:05:13,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:05:26] 2025-11-27 02:05:17,342 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:05:26] 2025-11-27 02:05:18,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220236207936)>', '<ExcThread(monitor, started 140219424675584)>']
[2025-11-26 21:05:26] 2025-11-27 02:05:19,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:05:26] 2025-11-27 02:05:19,889 | INFO     | [monitor] control thread has ended
[2025-11-26 21:05:26] 2025-11-27 02:05:23,958 | INFO     | all workflow threads have been joined
[2025-11-26 21:05:26] 2025-11-27 02:05:23,959 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:05:26] 2025-11-27 02:05:23,959 | INFO     | traces error code: 0
[2025-11-26 21:05:26] 2025-11-27 02:05:23,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:05:26] 2025-11-27 02:05:25,151 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:05:26] 2025-11-27 02:05:25,160 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:05:26] 2025-11-27 02:05:25,185 [wrapper] pilotpid: 166146
[2025-11-26 21:05:26] 2025-11-27 02:05:25,205 [wrapper] Pilot exit status: 0
[2025-11-26 21:05:26] 2025-11-27 02:05:25,279 [wrapper] pandaids: 6895386718
[2025-11-26 21:05:26] 2025-11-27 02:05:25,449 [wrapper] cleanup supervisor_pilot 4042683 166147
[2025-11-26 21:05:26] 2025-11-27 02:05:25,453 [wrapper] Test setup, not cleaning
[2025-11-26 21:05:26] 2025-11-27 02:05:25,462 [wrapper] apfmon messages muted
[2025-11-26 21:05:26] 2025-11-27 02:05:25,486 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:05:26] 2025-11-27 02:05:25,505 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:05:26]  *** Error codes and diagnostics ***
[2025-11-26 21:05:26]     "exeErrorCode": 0,
[2025-11-26 21:05:26]     "exeErrorDiag": "",
[2025-11-26 21:05:26]     "pilotErrorCode": 0,
[2025-11-26 21:05:26]     "pilotErrorDiag": "",
[2025-11-26 21:05:26]  *** Listing of results directory ***
[2025-11-26 21:05:26] total 1361824
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-26 21:05:26] -rwx------. 1 boincer umatlas     36292 Nov 24 00:52 runpilot2-wrapper.sh
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:52 queuedata.json
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:05:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:05 run_atlas
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:05 job.xml
[2025-11-26 21:05:26] -rw-r--r--. 2 boincer umatlas 408424763 Nov 25 00:05 EVNT.47483658._001251.pool.root.1
[2025-11-26 21:05:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:05 start_atlas.sh
[2025-11-26 21:05:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:05 shared
[2025-11-26 21:05:26] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 00:05 input.tar.gz
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:05 boinc_lockfile
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:05 pandaJob.out
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas        57 Nov 25 00:05 setup.sh.local
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas    991801 Nov 25 00:06 agis_schedconf.cvmfs.json
[2025-11-26 21:05:26] drwx------. 5 boincer umatlas      4096 Nov 25 00:06 pilot3
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:45 boinc_task_state.xml
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas      6880 Nov 26 21:03 init_data.xml
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas 935446116 Nov 26 21:03 HITS.47556149._002378.pool.root.1
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas      1074 Nov 26 21:04 memory_monitor_summary.json
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:04 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas   3428130 Nov 26 21:04 log.47556149._002378.job.log.tgz.1
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas        95 Nov 26 21:04 pilot_heartbeat.json
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas      8654 Nov 26 21:04 heartbeat.json
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:05 wrapper_checkpoint.txt
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:05 boinc_mmap_file
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas      4824 Nov 26 21:05 pilotlog.txt
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas  19926288 Nov 26 21:05 log.47556149._002378.job.log.1
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas       353 Nov 26 21:05 output.list
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:05 runtime_log
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas  23377920 Nov 26 21:05 result.tar.gz
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas      9354 Nov 26 21:05 runtime_log.err
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas       672 Nov 26 21:05 C2dNDmofeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuULKDmbKuGzm.diag
[2025-11-26 21:05:26] -rw-r--r--. 1 boincer umatlas     21367 Nov 26 21:05 stderr.txt
[2025-11-26 21:05:26] HITS file was successfully produced:
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas 935446116 Nov 26 21:03 shared/HITS.pool.root.1
[2025-11-26 21:05:26]  *** Contents of shared directory: ***
[2025-11-26 21:05:26] total 1335816
[2025-11-26 21:05:26] -rw-r--r--. 2 boincer umatlas 408424763 Nov 25 00:05 ATLAS.root_0
[2025-11-26 21:05:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:05 start_atlas.sh
[2025-11-26 21:05:26] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 00:05 input.tar.gz
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas 935446116 Nov 26 21:03 HITS.pool.root.1
[2025-11-26 21:05:26] -rw-------. 1 boincer umatlas  23377920 Nov 26 21:05 result.tar.gz
21:05:28 (148924): run_atlas exited; CPU time 271957.690167
21:05:28 (148924): called boinc_finish(0)

</stderr_txt>
]]>

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