Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:53 (63720): wrapper (7.7.26015): starting
10:00:53 (63720): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 10:00:53] Arguments: --nthreads 8
[2025-11-25 10:00:53] Threads: 8
[2025-11-25 10:00:53] Checking for CVMFS
[2025-11-25 10:00:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 10:00:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 10:00:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 10:00:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 10:00:55] 2.13.3.0 15551 27061 247620 153285 3 349 22122592 32935937 29475 16776704 0 48230855 99.589 52683512 38387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 10:00:55] CVMFS is ok
[2025-11-25 10:00:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 10:00:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 10:00:55] Further information can be found at the LHC@home message board.
[2025-11-25 10:00:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 10:00:55] Checking for apptainer binary...
[2025-11-25 10:00:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 10:00:55] Running /usr/bin/apptainer --version
[2025-11-25 10:00:55] apptainer version 1.4.4-1.el9
[2025-11-25 10:00:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 10:00:56] c6-5-7-3.aglt2.org
[2025-11-25 10:00:56] apptainer works
[2025-11-25 10:00:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 10:00:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 10:00:56] Starting ATLAS job with PandaID=6895386557
[2025-11-25 10:00:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:48:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:48:18] 2025-11-26 13:47:24,455 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:48:18] 2025-11-26 13:47:24,536 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:48:18] 2025-11-26 13:47:24,544 | INFO     | sum of square deviations: 749402048344.1691
[2025-11-26 08:48:18] 2025-11-26 13:47:24,646 | INFO     | sum of deviations: 4068263128310.1885
[2025-11-26 08:48:18] 2025-11-26 13:47:24,646 | INFO     | mean x: 1764123907.0938897
[2025-11-26 08:48:18] 2025-11-26 13:47:24,646 | INFO     | mean y: 2928274.2921013413
[2025-11-26 08:48:18] 2025-11-26 13:47:24,646 | INFO     | intersect: -9573934053.290596
[2025-11-26 08:48:18] 2025-11-26 13:47:24,648 | INFO     | chi2: 9.997228982364689
[2025-11-26 08:48:18] 2025-11-26 13:47:24,649 | INFO     | sum of square deviations: 741057139598.9203
[2025-11-26 08:48:18] 2025-11-26 13:47:24,683 | INFO     | sum of deviations: 4537533963910.135
[2025-11-26 08:48:18] 2025-11-26 13:47:24,684 | INFO     | mean x: 1764123754.5998504
[2025-11-26 08:48:18] 2025-11-26 13:47:24,684 | INFO     | mean y: 2936849.7105459985
[2025-11-26 08:48:18] 2025-11-26 13:47:24,684 | INFO     | intersect: -10798890735.905704
[2025-11-26 08:48:18] 2025-11-26 13:47:24,685 | INFO     | chi2: 6.669859545550049
[2025-11-26 08:48:18] 2025-11-26 13:47:24,685 | INFO     | current chi2=6.669859545550049 (change=33.28291712317669 %)
[2025-11-26 08:48:18] 2025-11-26 13:47:24,687 | INFO     | sum of square deviations: 732774418066.073
[2025-11-26 08:48:18] 2025-11-26 13:47:24,715 | INFO     | sum of deviations: 4898357938762.4375
[2025-11-26 08:48:18] 2025-11-26 13:47:24,716 | INFO     | mean x: 1764123602.105856
[2025-11-26 08:48:18] 2025-11-26 13:47:24,716 | INFO     | mean y: 2943488.2522522523
[2025-11-26 08:48:18] 2025-11-26 13:47:24,716 | INFO     | intersect: -11789647298.608753
[2025-11-26 08:48:18] 2025-11-26 13:47:24,717 | INFO     | chi2: 4.450947714631648
[2025-11-26 08:48:18] 2025-11-26 13:47:24,718 | INFO     | current chi2=4.450947714631648 (change=33.26774448194789 %)
[2025-11-26 08:48:18] 2025-11-26 13:47:24,719 | INFO     | sum of square deviations: 724553569933.3544
[2025-11-26 08:48:18] 2025-11-26 13:47:24,747 | INFO     | sum of deviations: 4959663097325.935
[2025-11-26 08:48:18] 2025-11-26 13:47:24,748 | INFO     | mean x: 1764123449.611153
[2025-11-26 08:48:18] 2025-11-26 13:47:24,748 | INFO     | mean y: 2944624.207234363
[2025-11-26 08:48:18] 2025-11-26 13:47:24,748 | INFO     | intersect: -12072709040.667473
[2025-11-26 08:48:18] 2025-11-26 13:47:24,749 | INFO     | chi2: 4.266521417173208
[2025-11-26 08:48:18] 2025-11-26 13:47:24,749 | INFO     | current chi2=4.266521417173208 (change=4.1435287332667095 %)
[2025-11-26 08:48:18] 2025-11-26 13:47:24,749 | INFO     | right removable region: 1326
[2025-11-26 08:48:18] 2025-11-26 13:47:24,751 | INFO     | sum of square deviations: 741055834808.9204
[2025-11-26 08:48:18] 2025-11-26 13:47:24,784 | INFO     | sum of deviations: 3568369079717.642
[2025-11-26 08:48:18] 2025-11-26 13:47:24,784 | INFO     | mean x: 1764124059.5998504
[2025-11-26 08:48:18] 2025-11-26 13:47:24,784 | INFO     | mean y: 2937406.2161555723
[2025-11-26 08:48:18] 2025-11-26 13:47:24,784 | INFO     | intersect: -8491760903.10251
[2025-11-26 08:48:18] 2025-11-26 13:47:24,790 | INFO     | chi2: 6.572007635534364
[2025-11-26 08:48:18] 2025-11-26 13:47:24,791 | INFO     | current chi2=6.572007635534364 (change=34.26170744785863 %)
[2025-11-26 08:48:18] 2025-11-26 13:47:24,792 | INFO     | sum of square deviations: 732771971360.4944
[2025-11-26 08:48:18] 2025-11-26 13:47:24,925 | INFO     | sum of deviations: 3388602690612.593
[2025-11-26 08:48:18] 2025-11-26 13:47:24,927 | INFO     | mean x: 1764124212.1043544
[2025-11-26 08:48:18] 2025-11-26 13:47:24,927 | INFO     | mean y: 2940712.1396396398
[2025-11-26 08:48:18] 2025-11-26 13:47:24,927 | INFO     | intersect: -8155007852.149457
[2025-11-26 08:48:18] 2025-11-26 13:47:24,935 | INFO     | chi2: 6.118649107514604
[2025-11-26 08:48:18] 2025-11-26 13:47:24,935 | INFO     | current chi2=6.118649107514604 (change=6.8983262522168065 %)
[2025-11-26 08:48:18] 2025-11-26 13:47:24,935 | INFO     | left removable region: 20
[2025-11-26 08:48:18] 2025-11-26 13:47:24,936 | INFO     | sum of square deviations: 690693792842.3992
[2025-11-26 08:48:18] 2025-11-26 13:47:24,984 | INFO     | sum of deviations: 4106266332909.3613
[2025-11-26 08:48:18] 2025-11-26 13:47:24,984 | INFO     | mean x: 1764124029.1225114
[2025-11-26 08:48:18] 2025-11-26 13:47:24,984 | INFO     | mean y: 2960680.110260337
[2025-11-26 08:48:18] 2025-11-26 13:47:24,984 | INFO     | intersect: -10484990975.06712
[2025-11-26 08:48:18] 2025-11-26 13:47:24,986 | INFO     | chi2: 0.2850246056190729
[2025-11-26 08:48:18] 2025-11-26 13:47:24,986 | INFO     | current memory leak: 5.95 B/s (using 1306 data points, chi2=0.29)
[2025-11-26 08:48:18] 2025-11-26 13:47:24,987 | INFO     | could have reported an average CPU frequency of 3090 MHz (48 samples)
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | ..............................
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . Timing measurements:
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . get job = 0 s
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . initial setup = 4 s
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . payload setup = 34 s
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . stage-in = 0 s
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . payload execution = 81833 s
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . stage-out = 6 s
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | . log creation = 2 s
[2025-11-26 08:48:18] 2025-11-26 13:47:24,988 | INFO     | ..............................
[2025-11-26 08:48:18] 2025-11-26 13:47:25,018 | INFO     | time since job start (81941s) is within the limit (172800.0s)
[2025-11-26 08:48:18] 2025-11-26 13:47:25,246 | INFO     | 
[2025-11-26 08:48:18] 2025-11-26 13:47:25,246 | INFO     | job summary report
[2025-11-26 08:48:18] 2025-11-26 13:47:25,246 | INFO     | --------------------------------------------------
[2025-11-26 08:48:18] 2025-11-26 13:47:25,246 | INFO     | PanDA job id: 6895386557
[2025-11-26 08:48:18] 2025-11-26 13:47:25,246 | INFO     | task id: 47556149
[2025-11-26 08:48:18] 2025-11-26 13:47:25,246 | INFO     | errors: (none)
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | pilot state: finished 
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | transexitcode: 0
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | exeerrorcode: 0
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | exeerrordiag: 
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | exitcode: 0
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | exitmsg: OK
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | cpuconsumptiontime: 244432 s
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | nevents: 1000
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | neventsw: 0
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | pid: 75518
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | pgrp: 75518
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | corecount: 8
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | event service: False
[2025-11-26 08:48:18] 2025-11-26 13:47:25,247 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 18: 2284582, 23: 2284610, 81871: 2347621, 81878: 2356615, 81879: 2356671, 81898: 2356917}
[2025-11-26 08:48:18] 2025-11-26 13:47:25,248 | INFO     | --------------------------------------------------
[2025-11-26 08:48:18] 2025-11-26 13:47:25,248 | INFO     | 
[2025-11-26 08:48:18] 2025-11-26 13:47:25,248 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 08:48:18] 2025-11-26 13:47:25,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | job 6895386557 has completed (purged errors)
[2025-11-26 08:48:18] 2025-11-26 13:47:25,332 | INFO     | overall cleanup function is called
[2025-11-26 08:48:18] 2025-11-26 13:47:26,348 | INFO     | --- collectZombieJob: --- 10, [75518]
[2025-11-26 08:48:18] 2025-11-26 13:47:26,348 | INFO     | zombie collector waiting for pid 75518
[2025-11-26 08:48:18] 2025-11-26 13:47:26,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:48:18] 2025-11-26 13:47:26,348 | INFO     | collected zombie processes
[2025-11-26 08:48:18] 2025-11-26 13:47:26,349 | INFO     | will attempt to kill all subprocesses of pid=75518
[2025-11-26 08:48:18] 2025-11-26 13:47:27,226 | INFO     | process IDs to be killed: [75518] (in reverse order)
[2025-11-26 08:48:18] 2025-11-26 13:47:27,368 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:48:18] 2025-11-26 13:47:27,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:48:18] 2025-11-26 13:47:27,481 | INFO     | did not find any defunct processes belonging to 75518
[2025-11-26 08:48:18] 2025-11-26 13:47:27,512 | INFO     | did not find any defunct processes belonging to 75518
[2025-11-26 08:48:18] 2025-11-26 13:47:27,517 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:48:18] 2025-11-26 13:47:27,518 | INFO     | ready for new job
[2025-11-26 08:48:18] 2025-11-26 13:47:27,518 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:48:18] 2025-11-26 13:47:27,527 | INFO     | ***************************************
[2025-11-26 08:48:18] 2025-11-26 13:47:27,527 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:48:18] 2025-11-26 13:47:27,527 | INFO     | ***************************************
[2025-11-26 08:48:18] 2025-11-26 13:47:27,527 | INFO     | 
[2025-11-26 08:48:18] 2025-11-26 13:47:27,534 | INFO     | architecture information:
[2025-11-26 08:48:18] 2025-11-26 13:47:27,542 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:48:18] 2025-11-26 13:47:27,587 | INFO     | cat /etc/os-release:
[2025-11-26 08:48:18] NAME="CentOS Linux"
[2025-11-26 08:48:18] VERSION="7 (Core)"
[2025-11-26 08:48:18] ID="centos"
[2025-11-26 08:48:18] ID_LIKE="rhel fedora"
[2025-11-26 08:48:18] VERSION_ID="7"
[2025-11-26 08:48:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:48:18] ANSI_COLOR="0;31"
[2025-11-26 08:48:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:48:18] HOME_URL="https://www.centos.org/"
[2025-11-26 08:48:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:48:18] 
[2025-11-26 08:48:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:48:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:48:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:48:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:48:18] 
[2025-11-26 08:48:18] 2025-11-26 13:47:27,588 | INFO     | ***************************************
[2025-11-26 08:48:18] 2025-11-26 13:47:28,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 08:48:18] 2025-11-26 13:47:28,144 | INFO     | sufficient remaining disk space (70772588544 B)
[2025-11-26 08:48:18] 2025-11-26 13:47:28,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:48:18] 2025-11-26 13:47:28,145 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:48:18] 2025-11-26 13:47:28,145 | INFO     | update_server=False
[2025-11-26 08:48:18] 2025-11-26 13:47:28,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:48:18] 2025-11-26 13:47:28,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:48:18] 2025-11-26 13:47:28,146 | INFO     | aborting loop
[2025-11-26 08:48:18] 2025-11-26 13:47:28,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:48:18] 2025-11-26 13:47:28,284 | INFO     | all data control threads have been joined
[2025-11-26 08:48:18] 2025-11-26 13:47:28,396 | INFO     | all payload control threads have been joined
[2025-11-26 08:48:18] 2025-11-26 13:47:28,785 | INFO     | all job control threads have been joined
[2025-11-26 08:48:18] 2025-11-26 13:47:29,151 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,163 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,297 | INFO     | [data] control thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,412 | INFO     | [payload] control thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,573 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,683 | INFO     | [job] validate thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,783 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,791 | INFO     | [job] control thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,971 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:29,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:48:18] 2025-11-26 13:47:30,113 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:30,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:30,259 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:30,282 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:30,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:48:18] 2025-11-26 13:47:30,334 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:31,331 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:33,985 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:48:18] 2025-11-26 13:47:59,730 | INFO     | PID=68014 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 08:48:18] 2025-11-26 13:47:59,730 | INFO     | .. there are 39 such processes running
[2025-11-26 08:48:18] 2025-11-26 13:47:59,735 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:48:18] 2025-11-26 13:47:59,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:48:18] 2025-11-26 13:47:59,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:48:18] 2025-11-26 13:48:12,269 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:48:18] 2025-11-26 13:48:12,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944609118016)>', '<ExcThread(monitor, started 139944102184704)>']
[2025-11-26 08:48:18] 2025-11-26 13:48:13,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:48:18] 2025-11-26 13:48:13,840 | INFO     | [monitor] control thread has ended
[2025-11-26 08:48:18] 2025-11-26 13:48:17,975 | INFO     | all workflow threads have been joined
[2025-11-26 08:48:18] 2025-11-26 13:48:17,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:48:18] 2025-11-26 13:48:17,975 | INFO     | traces error code: 0
[2025-11-26 08:48:18] 2025-11-26 13:48:17,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:48:18] 2025-11-26 13:48:18,308 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:48:18] 2025-11-26 13:48:18,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:48:18] 2025-11-26 13:48:18,314 [wrapper] pilotpid: 68014
[2025-11-26 08:48:18] 2025-11-26 13:48:18,317 [wrapper] Pilot exit status: 0
[2025-11-26 08:48:18] 2025-11-26 13:48:18,327 [wrapper] pandaids: 6895386557
[2025-11-26 08:48:18] 2025-11-26 13:48:18,424 [wrapper] cleanup supervisor_pilot  193795 68015
[2025-11-26 08:48:18] 2025-11-26 13:48:18,452 [wrapper] Test setup, not cleaning
[2025-11-26 08:48:18] 2025-11-26 13:48:18,455 [wrapper] apfmon messages muted
[2025-11-26 08:48:18] 2025-11-26 13:48:18,457 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:48:18] 2025-11-26 13:48:18,460 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:48:18]  *** Error codes and diagnostics ***
[2025-11-26 08:48:19]     "exeErrorCode": 0,
[2025-11-26 08:48:19]     "exeErrorDiag": "",
[2025-11-26 08:48:19]     "pilotErrorCode": 0,
[2025-11-26 08:48:19]     "pilotErrorDiag": "",
[2025-11-26 08:48:19]  *** Listing of results directory ***
[2025-11-26 08:48:19] total 1346036
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:25 queuedata.json
[2025-11-26 08:48:19] -rwx------. 1 boincer umatlas     36292 Nov 24 00:25 runpilot2-wrapper.sh
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas       100 Nov 25 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:48:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 10:00 run_atlas
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas       105 Nov 25 10:00 job.xml
[2025-11-26 08:48:19] -rw-r--r--. 2 boincer umatlas 411601483 Nov 25 10:00 EVNT.47483658._001246.pool.root.1
[2025-11-26 08:48:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 10:00 start_atlas.sh
[2025-11-26 08:48:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 10:00 shared
[2025-11-26 08:48:19] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 10:00 input.tar.gz
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas         0 Nov 25 10:00 boinc_lockfile
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 10:00 pandaJob.out
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas        57 Nov 25 10:00 setup.sh.local
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas    991909 Nov 25 10:01 agis_schedconf.cvmfs.json
[2025-11-26 08:48:19] drwx------. 5 boincer umatlas      4096 Nov 25 10:01 pilot3
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:31 boinc_task_state.xml
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas 937497960 Nov 26 08:45 HITS.47556149._002328.pool.root.1
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 08:46 init_data.xml
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas      1058 Nov 26 08:46 memory_monitor_summary.json
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:47 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas   2396989 Nov 26 08:47 log.47556149._002328.job.log.tgz.1
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas      8629 Nov 26 08:47 heartbeat.json
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas        95 Nov 26 08:47 pilot_heartbeat.json
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:48 boinc_mmap_file
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:48 wrapper_checkpoint.txt
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas      4822 Nov 26 08:48 pilotlog.txt
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas  10264337 Nov 26 08:48 log.47556149._002328.job.log.1
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas       353 Nov 26 08:48 output.list
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:48 runtime_log
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas  12677120 Nov 26 08:48 result.tar.gz
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 08:48 runtime_log.err
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas       660 Nov 26 08:48 hZQLDmAGeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7TLKDmjhS80n.diag
[2025-11-26 08:48:19] -rw-r--r--. 1 boincer umatlas     21128 Nov 26 08:48 stderr.txt
[2025-11-26 08:48:19] HITS file was successfully produced:
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas 937497960 Nov 26 08:45 shared/HITS.pool.root.1
[2025-11-26 08:48:19]  *** Contents of shared directory: ***
[2025-11-26 08:48:19] total 1330468
[2025-11-26 08:48:19] -rw-r--r--. 2 boincer umatlas 411601483 Nov 25 10:00 ATLAS.root_0
[2025-11-26 08:48:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 10:00 start_atlas.sh
[2025-11-26 08:48:19] -rw-r--r--. 2 boincer umatlas    590106 Nov 25 10:00 input.tar.gz
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas 937497960 Nov 26 08:45 HITS.pool.root.1
[2025-11-26 08:48:19] -rw-------. 1 boincer umatlas  12677120 Nov 26 08:48 result.tar.gz
08:48:21 (63720): run_atlas exited; CPU time 246692.356569
08:48:21 (63720): called boinc_finish(0)

</stderr_txt>
]]>

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