Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:13:36 (2904312): wrapper (7.7.26015): starting
10:13:36 (2904312): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 10:13:36] Arguments: --nthreads 8
[2025-11-25 10:13:36] Threads: 8
[2025-11-25 10:13:36] Checking for CVMFS
[2025-11-25 10:13:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 10:13:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 10:13:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 10:13:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 10:13:37] 2.13.3.0 9366 28729 344756 153286 3 320 17583048 32935937 26147 16776704 0 191624675 99.815 91097285 33097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 10:13:37] CVMFS is ok
[2025-11-25 10:13:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 10:13:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 10:13:37] Further information can be found at the LHC@home message board.
[2025-11-25 10:13:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 10:13:37] Checking for apptainer binary...
[2025-11-25 10:13:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 10:13:37] Running /usr/bin/apptainer --version
[2025-11-25 10:13:38] apptainer version 1.4.4-1.el9
[2025-11-25 10:13:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 10:13:38] c-6-2.aglt2.org
[2025-11-25 10:13:38] apptainer works
[2025-11-25 10:13:38] Set ATHENA_PROC_NUMBER=8
[2025-11-25 10:13:38] Set ATHENA_CORE_NUMBER=8
[2025-11-25 10:13:38] Starting ATLAS job with PandaID=6895386726
[2025-11-25 10:13:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:01:13]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:01:13] 2025-11-26 10:00:09,968 | INFO     | monitor loop #4325: job 0:6895386726 is in state 'finished'
[2025-11-26 05:01:13] 2025-11-26 10:00:09,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:01:13] 2025-11-26 10:00:10,792 | INFO     | time since job start (67562s) is within the limit (172800.0s)
[2025-11-26 05:01:13] 2025-11-26 10:00:12,475 | INFO     | monitor loop #4326: job 0:6895386726 is in state 'finished'
[2025-11-26 05:01:13] 2025-11-26 10:00:12,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:01:13] 2025-11-26 10:00:12,808 | INFO     | time since job start (67564s) is within the limit (172800.0s)
[2025-11-26 05:01:13] 2025-11-26 10:00:14,814 | INFO     | time since job start (67566s) is within the limit (172800.0s)
[2025-11-26 05:01:13] 2025-11-26 10:00:15,029 | INFO     | monitor loop #4327: job 0:6895386726 is in state 'finished'
[2025-11-26 05:01:13] 2025-11-26 10:00:15,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:01:13] 2025-11-26 10:00:16,843 | INFO     | time since job start (67568s) is within the limit (172800.0s)
[2025-11-26 05:01:13] 2025-11-26 10:00:17,536 | INFO     | monitor loop #4328: job 0:6895386726 is in state 'finished'
[2025-11-26 05:01:13] 2025-11-26 10:00:17,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:01:13] 2025-11-26 10:00:18,850 | INFO     | time since job start (67570s) is within the limit (172800.0s)
[2025-11-26 05:01:13] 2025-11-26 10:00:20,066 | INFO     | monitor loop #4329: job 0:6895386726 is in state 'finished'
[2025-11-26 05:01:13] 2025-11-26 10:00:20,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:01:13] 2025-11-26 10:00:20,858 | INFO     | time since job start (67572s) is within the limit (172800.0s)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,061 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 05:01:13] 2025-11-26 10:00:22,072 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9279499999993
[2025-11-26 05:01:13] 2025-11-26 10:00:22,088 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895386726/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,089 | INFO     | extracted standard info from prmon json
[2025-11-26 05:01:13] 2025-11-26 10:00:22,089 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:01:13] 2025-11-26 10:00:22,089 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:01:13] 2025-11-26 10:00:22,140 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:01:13] 2025-11-26 10:00:22,141 | INFO     | sum of square deviations: 419520849298.6737
[2025-11-26 05:01:13] 2025-11-26 10:00:22,233 | INFO     | sum of deviations: 2475300301410.615
[2025-11-26 05:01:13] 2025-11-26 10:00:22,234 | INFO     | mean x: 1764117424.982821
[2025-11-26 05:01:13] 2025-11-26 10:00:22,242 | INFO     | mean y: 2899385.8743218808
[2025-11-26 05:01:13] 2025-11-26 10:00:22,242 | INFO     | intersect: -10405928688.06689
[2025-11-26 05:01:13] 2025-11-26 10:00:22,244 | INFO     | chi2: 16.108805274428324
[2025-11-26 05:01:13] 2025-11-26 10:00:22,250 | INFO     | sum of square deviations: 413857119925.0028
[2025-11-26 05:01:13] 2025-11-26 10:00:22,343 | INFO     | sum of deviations: 2834921407792.296
[2025-11-26 05:01:13] 2025-11-26 10:00:22,344 | INFO     | mean x: 1764117272.4850137
[2025-11-26 05:01:13] 2025-11-26 10:00:22,344 | INFO     | mean y: 2909066.714804723
[2025-11-26 05:01:13] 2025-11-26 10:00:22,344 | INFO     | intersect: -12081294830.828873
[2025-11-26 05:01:13] 2025-11-26 10:00:22,350 | INFO     | chi2: 13.031648947059242
[2025-11-26 05:01:13] 2025-11-26 10:00:22,350 | INFO     | current chi2=13.031648947059242 (change=19.10232493935392 %)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,350 | INFO     | right removable region: 1100
[2025-11-26 05:01:13] 2025-11-26 10:00:22,352 | INFO     | sum of square deviations: 413856794185.00275
[2025-11-26 05:01:13] 2025-11-26 10:00:22,485 | INFO     | sum of deviations: 2035840339697.3643
[2025-11-26 05:01:13] 2025-11-26 10:00:22,486 | INFO     | mean x: 1764117577.4850137
[2025-11-26 05:01:13] 2025-11-26 10:00:22,486 | INFO     | mean y: 2911216.325158946
[2025-11-26 05:01:13] 2025-11-26 10:00:22,486 | INFO     | intersect: -8675118910.704052
[2025-11-26 05:01:13] 2025-11-26 10:00:22,496 | INFO     | chi2: 12.170621025623122
[2025-11-26 05:01:13] 2025-11-26 10:00:22,496 | INFO     | current chi2=12.170621025623122 (change=24.447401167961303 %)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,496 | INFO     | left removable region: 10
[2025-11-26 05:01:13] 2025-11-26 10:00:22,498 | INFO     | sum of square deviations: 401576196498.88855
[2025-11-26 05:01:13] 2025-11-26 10:00:22,596 | INFO     | sum of deviations: 2193121474859.8936
[2025-11-26 05:01:13] 2025-11-26 10:00:22,596 | INFO     | mean x: 1764117546.9899082
[2025-11-26 05:01:13] 2025-11-26 10:00:22,596 | INFO     | mean y: 2930268.2633027523
[2025-11-26 05:01:13] 2025-11-26 10:00:22,596 | INFO     | intersect: -9631415866.322475
[2025-11-26 05:01:13] 2025-11-26 10:00:22,598 | INFO     | chi2: 7.181225026800824
[2025-11-26 05:01:13] 2025-11-26 10:00:22,602 | INFO     | current memory leak: 5.46 B/s (using 1090 data points, chi2=7.18)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,603 | INFO     | could have reported an average CPU frequency of 2599 MHz (40 samples)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | ..............................
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . Timing measurements:
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . get job = 0 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . initial setup = 4 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . payload setup = 20 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . stage-in = 0 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . payload execution = 67469 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . stage-out = 9 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,604 | INFO     | . log creation = 1 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,605 | INFO     | ..............................
[2025-11-26 05:01:13] 2025-11-26 10:00:22,873 | INFO     | time since job start (67574s) is within the limit (172800.0s)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,965 | INFO     | 
[2025-11-26 05:01:13] 2025-11-26 10:00:22,965 | INFO     | job summary report
[2025-11-26 05:01:13] 2025-11-26 10:00:22,965 | INFO     | --------------------------------------------------
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | PanDA job id: 6895386726
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | task id: 47556149
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | errors: (none)
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | pilot state: finished 
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | transexitcode: 0
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | exeerrorcode: 0
[2025-11-26 05:01:13] 2025-11-26 10:00:22,966 | INFO     | exeerrordiag: 
[2025-11-26 05:01:13] 2025-11-26 10:00:22,967 | INFO     | exitcode: 0
[2025-11-26 05:01:13] 2025-11-26 10:00:22,967 | INFO     | exitmsg: OK
[2025-11-26 05:01:13] 2025-11-26 10:00:22,967 | INFO     | cpuconsumptiontime: 298683 s
[2025-11-26 05:01:13] 2025-11-26 10:00:22,967 | INFO     | nevents: 1000
[2025-11-26 05:01:13] 2025-11-26 10:00:22,971 | INFO     | neventsw: 0
[2025-11-26 05:01:13] 2025-11-26 10:00:22,971 | INFO     | pid: 2926592
[2025-11-26 05:01:13] 2025-11-26 10:00:22,971 | INFO     | pgrp: 2926592
[2025-11-26 05:01:13] 2025-11-26 10:00:22,971 | INFO     | corecount: 8
[2025-11-26 05:01:13] 2025-11-26 10:00:22,972 | INFO     | event service: False
[2025-11-26 05:01:13] 2025-11-26 10:00:22,972 | INFO     | sizes: {0: 2283436, 1: 2284292, 2: 2284292, 13: 2284320, 14: 2284638, 24: 2284666, 67494: 2341382, 67495: 2341381, 67505: 2350487, 67536: 2350677}
[2025-11-26 05:01:13] 2025-11-26 10:00:22,972 | INFO     | --------------------------------------------------
[2025-11-26 05:01:13] 2025-11-26 10:00:22,972 | INFO     | 
[2025-11-26 05:01:13] 2025-11-26 10:00:22,972 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 05:01:13] 2025-11-26 10:00:23,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:01:13] 2025-11-26 10:00:23,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:01:13] 2025-11-26 10:00:23,027 | INFO     | job 6895386726 has completed (purged errors)
[2025-11-26 05:01:13] 2025-11-26 10:00:23,027 | INFO     | overall cleanup function is called
[2025-11-26 05:01:13] 2025-11-26 10:00:24,059 | INFO     | --- collectZombieJob: --- 10, [2926592]
[2025-11-26 05:01:13] 2025-11-26 10:00:24,059 | INFO     | zombie collector waiting for pid 2926592
[2025-11-26 05:01:13] 2025-11-26 10:00:24,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:01:13] 2025-11-26 10:00:24,060 | INFO     | collected zombie processes
[2025-11-26 05:01:13] 2025-11-26 10:00:24,060 | INFO     | will attempt to kill all subprocesses of pid=2926592
[2025-11-26 05:01:13] 2025-11-26 10:00:25,158 | INFO     | process IDs to be killed: [2926592] (in reverse order)
[2025-11-26 05:01:13] 2025-11-26 10:00:25,394 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:01:13] 2025-11-26 10:00:25,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:01:13] 2025-11-26 10:00:25,440 | INFO     | did not find any defunct processes belonging to 2926592
[2025-11-26 05:01:13] 2025-11-26 10:00:25,458 | INFO     | did not find any defunct processes belonging to 2926592
[2025-11-26 05:01:13] 2025-11-26 10:00:25,461 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:01:13] 2025-11-26 10:00:25,461 | INFO     | ready for new job
[2025-11-26 05:01:13] 2025-11-26 10:00:25,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:01:13] 2025-11-26 10:00:25,467 | INFO     | ***************************************
[2025-11-26 05:01:13] 2025-11-26 10:00:25,467 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:01:13] 2025-11-26 10:00:25,467 | INFO     | ***************************************
[2025-11-26 05:01:13] 2025-11-26 10:00:25,467 | INFO     | 
[2025-11-26 05:01:13] 2025-11-26 10:00:25,469 | INFO     | architecture information:
[2025-11-26 05:01:13] 2025-11-26 10:00:25,470 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:01:13] 2025-11-26 10:00:25,508 | INFO     | cat /etc/os-release:
[2025-11-26 05:01:13] NAME="CentOS Linux"
[2025-11-26 05:01:13] VERSION="7 (Core)"
[2025-11-26 05:01:13] ID="centos"
[2025-11-26 05:01:13] ID_LIKE="rhel fedora"
[2025-11-26 05:01:13] VERSION_ID="7"
[2025-11-26 05:01:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:01:13] ANSI_COLOR="0;31"
[2025-11-26 05:01:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:01:13] HOME_URL="https://www.centos.org/"
[2025-11-26 05:01:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:01:13] 
[2025-11-26 05:01:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:01:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:01:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:01:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:01:13] 
[2025-11-26 05:01:13] 2025-11-26 10:00:25,509 | INFO     | ***************************************
[2025-11-26 05:01:13] 2025-11-26 10:00:26,013 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 05:01:13] 2025-11-26 10:00:26,078 | INFO     | sufficient remaining disk space (70347915264 B)
[2025-11-26 05:01:13] 2025-11-26 10:00:26,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:01:13] 2025-11-26 10:00:26,079 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:01:13] 2025-11-26 10:00:26,083 | INFO     | update_server=False
[2025-11-26 05:01:13] 2025-11-26 10:00:26,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:01:13] 2025-11-26 10:00:26,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:01:13] 2025-11-26 10:00:26,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:01:13] 2025-11-26 10:00:26,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:01:13] 2025-11-26 10:00:26,154 | INFO     | aborting loop
[2025-11-26 05:01:13] 2025-11-26 10:00:26,568 | INFO     | all payload control threads have been joined
[2025-11-26 05:01:13] 2025-11-26 10:00:26,833 | INFO     | all data control threads have been joined
[2025-11-26 05:01:13] 2025-11-26 10:00:27,088 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,138 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,139 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,159 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,350 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,359 | INFO     | [job] validate thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,462 | INFO     | all job control threads have been joined
[2025-11-26 05:01:13] 2025-11-26 10:00:27,486 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,575 | INFO     | [payload] control thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,849 | INFO     | [data] control thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:27,855 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:01:13] 2025-11-26 10:00:28,089 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:28,145 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:28,356 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:28,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:28,486 | INFO     | [job] control thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:28,893 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:30,096 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:01:13] 2025-11-26 10:00:57,695 | INFO     | PID=2911245 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 05:01:13] 2025-11-26 10:00:57,695 | INFO     | .. there are 45 such processes running
[2025-11-26 05:01:13] 2025-11-26 10:00:57,696 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:01:13] 2025-11-26 10:00:57,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:01:13] 2025-11-26 10:00:57,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:01:13] 2025-11-26 10:01:05,740 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:01:13] 2025-11-26 10:01:06,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521403193152)>', '<ExcThread(monitor, started 140520902870784)>']
[2025-11-26 05:01:13] 2025-11-26 10:01:06,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:01:13] 2025-11-26 10:01:06,801 | INFO     | [monitor] control thread has ended
[2025-11-26 05:01:13] 2025-11-26 10:01:11,709 | INFO     | all workflow threads have been joined
[2025-11-26 05:01:13] 2025-11-26 10:01:11,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:01:13] 2025-11-26 10:01:11,710 | INFO     | traces error code: 0
[2025-11-26 05:01:13] 2025-11-26 10:01:11,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:01:13] 2025-11-26 10:01:11,950 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:01:13] 2025-11-26 10:01:11,990 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:01:13] 2025-11-26 10:01:12,062 [wrapper] pilotpid: 2911245
[2025-11-26 05:01:13] 2025-11-26 10:01:12,082 [wrapper] Pilot exit status: 0
[2025-11-26 05:01:13] 2025-11-26 10:01:12,193 [wrapper] pandaids: 6895386726
[2025-11-26 05:01:13] 2025-11-26 10:01:12,644 [wrapper] cleanup supervisor_pilot 3034919 2911247
[2025-11-26 05:01:13] 2025-11-26 10:01:12,665 [wrapper] Test setup, not cleaning
[2025-11-26 05:01:13] 2025-11-26 10:01:12,685 [wrapper] apfmon messages muted
[2025-11-26 05:01:13] 2025-11-26 10:01:12,709 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:01:13] 2025-11-26 10:01:12,740 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:01:13]  *** Error codes and diagnostics ***
[2025-11-26 05:01:13]     "exeErrorCode": 0,
[2025-11-26 05:01:13]     "exeErrorDiag": "",
[2025-11-26 05:01:13]     "pilotErrorCode": 0,
[2025-11-26 05:01:13]     "pilotErrorDiag": "",
[2025-11-26 05:01:13]  *** Listing of results directory ***
[2025-11-26 05:01:13] total 1318624
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:52 queuedata.json
[2025-11-26 05:01:13] -rwx------. 1 boincer umatlas     36292 Nov 24 00:53 runpilot2-wrapper.sh
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas       100 Nov 25 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:01:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 10:13 run_atlas
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas       105 Nov 25 10:13 job.xml
[2025-11-26 05:01:13] -rw-r--r--. 2 boincer umatlas 409435273 Nov 25 10:13 EVNT.47483658._001252.pool.root.1
[2025-11-26 05:01:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 10:13 start_atlas.sh
[2025-11-26 05:01:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 10:13 shared
[2025-11-26 05:01:13] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 10:13 input.tar.gz
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas         0 Nov 25 10:13 boinc_lockfile
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 10:13 pandaJob.out
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas        57 Nov 25 10:13 setup.sh.local
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas    991909 Nov 25 10:14 agis_schedconf.cvmfs.json
[2025-11-26 05:01:13] drwx------. 5 boincer umatlas      4096 Nov 25 10:14 pilot3
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas       533 Nov 26 04:29 boinc_task_state.xml
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas 914612320 Nov 26 04:58 HITS.47556149._002386.pool.root.1
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas      6656 Nov 26 04:58 init_data.xml
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas      1059 Nov 26 04:59 memory_monitor_summary.json
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas   1516240 Nov 26 04:59 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas   2258379 Nov 26 04:59 log.47556149._002386.job.log.tgz.1
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas      8616 Nov 26 05:00 heartbeat.json
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas        95 Nov 26 05:00 pilot_heartbeat.json
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas        29 Nov 26 05:01 wrapper_checkpoint.txt
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 05:01 boinc_mmap_file
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas      4824 Nov 26 05:01 pilotlog.txt
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas   8891691 Nov 26 05:01 log.47556149._002386.job.log.1
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas       353 Nov 26 05:01 output.list
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas       620 Nov 26 05:01 runtime_log
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas  11171840 Nov 26 05:01 result.tar.gz
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 05:01 runtime_log.err
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas       657 Nov 26 05:01 mC3KDmygeh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwwIKDm3iQ5bm.diag
[2025-11-26 05:01:13] -rw-r--r--. 1 boincer umatlas     21799 Nov 26 05:01 stderr.txt
[2025-11-26 05:01:13] HITS file was successfully produced:
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas 914612320 Nov 26 04:58 shared/HITS.pool.root.1
[2025-11-26 05:01:13]  *** Contents of shared directory: ***
[2025-11-26 05:01:13] total 1304532
[2025-11-26 05:01:13] -rw-r--r--. 2 boincer umatlas 409435273 Nov 25 10:13 ATLAS.root_0
[2025-11-26 05:01:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 10:13 start_atlas.sh
[2025-11-26 05:01:13] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 10:13 input.tar.gz
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas 914612320 Nov 26 04:58 HITS.pool.root.1
[2025-11-26 05:01:13] -rw-------. 1 boincer umatlas  11171840 Nov 26 05:01 result.tar.gz
05:01:14 (2904312): run_atlas exited; CPU time 301346.116934
05:01:14 (2904312): called boinc_finish(0)

</stderr_txt>
]]>

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