Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:49 (3929774): wrapper (7.7.26015): starting
00:03:49 (3929774): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:03:49] Arguments: --nthreads 9
[2025-11-25 00:03:49] Threads: 9
[2025-11-25 00:03:49] Checking for CVMFS
[2025-11-25 00:03:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:52] 2.13.3.0 12348 28167 395992 153270 2 617 28242137 32935936 36010 16776704 0 140087695 99.501 179034468 35880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:52] CVMFS is ok
[2025-11-25 00:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:52] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:52] Checking for apptainer binary...
[2025-11-25 00:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:52] Running /usr/bin/apptainer --version
[2025-11-25 00:03:52] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:53] c6-12-27-2.aglt2.org
[2025-11-25 00:03:53] apptainer works
[2025-11-25 00:03:53] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:03:53] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:03:53] Starting ATLAS job with PandaID=6895386725
[2025-11-25 00:03:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:26:38]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:26:38] 2025-11-26 00:53:26,070 | INFO     | time since job start (71299s) is within the limit (172800.0s)
[2025-11-25 21:26:38] 2025-11-26 00:53:27,611 | INFO     | monitor loop #4206: job 0:6895386725 is in state 'finished'
[2025-11-25 21:26:38] 2025-11-26 00:53:27,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:26:38] 2025-11-26 00:53:28,079 | INFO     | time since job start (71301s) is within the limit (172800.0s)
[2025-11-25 21:26:38] 2025-11-26 00:53:30,086 | INFO     | time since job start (71303s) is within the limit (172800.0s)
[2025-11-25 21:26:38] 2025-11-26 00:53:30,118 | INFO     | monitor loop #4207: job 0:6895386725 is in state 'finished'
[2025-11-25 21:26:38] 2025-11-26 00:53:30,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,114 | INFO     | time since job start (71305s) is within the limit (172800.0s)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,249 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 21:26:38] 2025-11-26 00:53:32,295 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2764.0582395833335
[2025-11-25 21:26:38] 2025-11-26 00:53:32,346 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6895386725/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,346 | INFO     | extracted standard info from prmon json
[2025-11-25 21:26:38] 2025-11-26 00:53:32,346 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:26:38] 2025-11-26 00:53:32,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:26:38] 2025-11-26 00:53:32,421 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:26:38] 2025-11-26 00:53:32,426 | INFO     | sum of square deviations: 491527279076.71277
[2025-11-25 21:26:38] 2025-11-26 00:53:32,483 | INFO     | sum of deviations: 2882743405997.138
[2025-11-25 21:26:38] 2025-11-26 00:53:32,484 | INFO     | mean x: 1764082818.360206
[2025-11-25 21:26:38] 2025-11-26 00:53:32,484 | INFO     | mean y: 2963530.9425385934
[2025-11-25 21:26:38] 2025-11-26 00:53:32,484 | INFO     | intersect: -10343152195.967201
[2025-11-25 21:26:38] 2025-11-26 00:53:32,489 | INFO     | chi2: 14.740679805224064
[2025-11-25 21:26:38] 2025-11-26 00:53:32,491 | INFO     | sum of square deviations: 485232096539.38696
[2025-11-25 21:26:38] 2025-11-26 00:53:32,540 | INFO     | sum of deviations: 3290772348640.567
[2025-11-25 21:26:38] 2025-11-26 00:53:32,540 | INFO     | mean x: 1764082665.8768303
[2025-11-25 21:26:38] 2025-11-26 00:53:32,540 | INFO     | mean y: 2973412.6683893194
[2025-11-25 21:26:38] 2025-11-26 00:53:32,540 | INFO     | intersect: -11960774449.40733
[2025-11-25 21:26:38] 2025-11-26 00:53:32,545 | INFO     | chi2: 11.473041104022116
[2025-11-25 21:26:38] 2025-11-26 00:53:32,545 | INFO     | current chi2=11.473041104022116 (change=22.167489860568736 %)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,545 | INFO     | right removable region: 1160
[2025-11-25 21:26:38] 2025-11-26 00:53:32,546 | INFO     | sum of square deviations: 485229350929.38654
[2025-11-25 21:26:38] 2025-11-26 00:53:32,659 | INFO     | monitor loop #4208: job 0:6895386725 is in state 'finished'
[2025-11-25 21:26:38] 2025-11-26 00:53:32,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,660 | INFO     | sum of deviations: 2395356704688.6494
[2025-11-25 21:26:38] 2025-11-26 00:53:32,661 | INFO     | mean x: 1764082970.8768303
[2025-11-25 21:26:38] 2025-11-26 00:53:32,661 | INFO     | mean y: 2975332.87166236
[2025-11-25 21:26:38] 2025-11-26 00:53:32,661 | INFO     | intersect: -8705500285.561863
[2025-11-25 21:26:38] 2025-11-26 00:53:32,662 | INFO     | chi2: 10.500264481893485
[2025-11-25 21:26:38] 2025-11-26 00:53:32,662 | INFO     | current chi2=10.500264481893485 (change=28.766755532046666 %)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,664 | INFO     | sum of square deviations: 478985423793.9133
[2025-11-25 21:26:38] 2025-11-26 00:53:32,718 | INFO     | sum of deviations: 2046916283331.5686
[2025-11-25 21:26:38] 2025-11-26 00:53:32,719 | INFO     | mean x: 1764083123.3935986
[2025-11-25 21:26:38] 2025-11-26 00:53:32,719 | INFO     | mean y: 2983840.42733564
[2025-11-25 21:26:38] 2025-11-26 00:53:32,719 | INFO     | intersect: -7535722539.870358
[2025-11-25 21:26:38] 2025-11-26 00:53:32,724 | INFO     | chi2: 8.421110379467946
[2025-11-25 21:26:38] 2025-11-26 00:53:32,724 | INFO     | current chi2=8.421110379467946 (change=19.800968880458246 %)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,725 | INFO     | left removable region: 20
[2025-11-25 21:26:38] 2025-11-26 00:53:32,726 | INFO     | sum of square deviations: 459372669608.1571
[2025-11-25 21:26:38] 2025-11-26 00:53:32,781 | INFO     | sum of deviations: 2334988979101.0825
[2025-11-25 21:26:38] 2025-11-26 00:53:32,781 | INFO     | mean x: 1764083245.3938596
[2025-11-25 21:26:38] 2025-11-26 00:53:32,781 | INFO     | mean y: 3001649.5543859648
[2025-11-25 21:26:38] 2025-11-26 00:53:32,782 | INFO     | intersect: -8963824652.334927
[2025-11-25 21:26:38] 2025-11-26 00:53:32,787 | INFO     | chi2: 4.020268067432036
[2025-11-25 21:26:38] 2025-11-26 00:53:32,787 | INFO     | current memory leak: 5.08 B/s (using 1140 data points, chi2=4.02)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,789 | INFO     | could have reported an average CPU frequency of 2720 MHz (42 samples)
[2025-11-25 21:26:38] 2025-11-26 00:53:32,789 | INFO     | ..............................
[2025-11-25 21:26:38] 2025-11-26 00:53:32,789 | INFO     | . Timing measurements:
[2025-11-25 21:26:38] 2025-11-26 00:53:32,789 | INFO     | . get job = 0 s
[2025-11-25 21:26:38] 2025-11-26 00:53:32,789 | INFO     | . initial setup = 4 s
[2025-11-25 21:26:38] 2025-11-26 00:53:32,789 | INFO     | . payload setup = 56 s
[2025-11-25 21:26:38] 2025-11-26 00:53:32,789 | INFO     | . stage-in = 0 s
[2025-11-25 21:26:38] 2025-11-26 00:53:32,790 | INFO     | . payload execution = 71122 s
[2025-11-25 21:26:38] 2025-11-26 00:53:32,790 | INFO     | . stage-out = 7 s
[2025-11-25 21:26:38] 2025-11-26 00:53:32,790 | INFO     | . log creation = 1 s
[2025-11-25 21:26:38] 2025-11-26 00:53:32,790 | INFO     | ..............................
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | 
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | job summary report
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | --------------------------------------------------
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | PanDA job id: 6895386725
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | task id: 47556149
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | errors: (none)
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:26:38] 2025-11-26 00:53:33,320 | INFO     | pilot state: finished 
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | transexitcode: 0
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | exeerrorcode: 0
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | exeerrordiag: 
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | exitcode: 0
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | exitmsg: OK
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | cpuconsumptiontime: 261536 s
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | nevents: 1000
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | neventsw: 0
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | pid: 3982009
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | pgrp: 3982009
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | corecount: 9
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | event service: False
[2025-11-25 21:26:38] 2025-11-26 00:53:33,321 | INFO     | sizes: {0: 2284032, 1: 2284116, 2: 2284287, 13: 2284315, 24: 2284371, 35: 2284399, 36: 2284817, 46: 2284845, 71183: 2341917, 71191: 2350972, 71216: 2351162}
[2025-11-25 21:26:38] 2025-11-26 00:53:33,323 | INFO     | --------------------------------------------------
[2025-11-25 21:26:38] 2025-11-26 00:53:33,323 | INFO     | 
[2025-11-25 21:26:38] 2025-11-26 00:53:33,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-25 21:26:38] 2025-11-26 00:53:33,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,469 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:26:38] 2025-11-26 00:53:33,469 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,469 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:26:38] 2025-11-26 00:53:33,469 | INFO     | job 6895386725 has completed (purged errors)
[2025-11-25 21:26:38] 2025-11-26 00:53:33,469 | INFO     | overall cleanup function is called
[2025-11-25 21:26:38] 2025-11-26 00:53:34,495 | INFO     | --- collectZombieJob: --- 10, [3982009]
[2025-11-25 21:26:38] 2025-11-26 00:53:34,497 | INFO     | zombie collector waiting for pid 3982009
[2025-11-25 21:26:38] 2025-11-26 00:53:34,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:26:38] 2025-11-26 00:53:34,498 | INFO     | collected zombie processes
[2025-11-25 21:26:38] 2025-11-26 00:53:34,498 | INFO     | will attempt to kill all subprocesses of pid=3982009
[2025-11-25 21:26:38] 2025-11-26 00:53:35,279 | INFO     | process IDs to be killed: [3982009] (in reverse order)
[2025-11-25 21:26:38] 2025-11-26 00:53:35,479 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:26:38] 2025-11-26 00:53:35,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:26:38] 2025-11-26 00:53:35,501 | INFO     | did not find any defunct processes belonging to 3982009
[2025-11-25 21:26:38] 2025-11-26 00:53:35,521 | INFO     | did not find any defunct processes belonging to 3982009
[2025-11-25 21:26:38] 2025-11-26 00:53:35,522 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:26:38] 2025-11-26 00:53:35,522 | INFO     | ready for new job
[2025-11-25 21:26:38] 2025-11-26 00:53:35,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:26:38] 2025-11-26 00:53:35,526 | INFO     | ***************************************
[2025-11-25 21:26:38] 2025-11-26 00:53:35,527 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:26:38] 2025-11-26 00:53:35,527 | INFO     | ***************************************
[2025-11-25 21:26:38] 2025-11-26 00:53:35,527 | INFO     | 
[2025-11-25 21:26:38] 2025-11-26 00:53:35,536 | INFO     | architecture information:
[2025-11-25 21:26:38] 2025-11-26 00:53:35,540 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:26:38] 2025-11-26 00:53:35,603 | INFO     | cat /etc/os-release:
[2025-11-25 21:26:38] NAME="CentOS Linux"
[2025-11-25 21:26:38] VERSION="7 (Core)"
[2025-11-25 21:26:38] ID="centos"
[2025-11-25 21:26:38] ID_LIKE="rhel fedora"
[2025-11-25 21:26:38] VERSION_ID="7"
[2025-11-25 21:26:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:26:38] ANSI_COLOR="0;31"
[2025-11-25 21:26:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:26:38] HOME_URL="https://www.centos.org/"
[2025-11-25 21:26:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:26:38] 
[2025-11-25 21:26:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:26:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:26:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:26:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:26:38] 
[2025-11-25 21:26:38] 2025-11-26 00:53:35,604 | INFO     | ***************************************
[2025-11-25 21:26:38] 2025-11-26 00:53:36,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-25 21:26:38] 2025-11-26 00:53:36,193 | INFO     | sufficient remaining disk space (87082139648 B)
[2025-11-25 21:26:38] 2025-11-26 00:53:36,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:26:38] 2025-11-26 00:53:36,193 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:26:38] 2025-11-26 00:53:36,193 | INFO     | update_server=False
[2025-11-25 21:26:38] 2025-11-26 00:53:36,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:26:38] 2025-11-26 00:53:36,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:26:38] 2025-11-26 00:53:36,194 | INFO     | aborting loop
[2025-11-25 21:26:38] 2025-11-26 00:53:36,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:26:38] 2025-11-26 00:53:36,452 | INFO     | all data control threads have been joined
[2025-11-25 21:26:38] 2025-11-26 00:53:36,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:26:38] 2025-11-26 00:53:37,211 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:37,223 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:37,404 | INFO     | all job control threads have been joined
[2025-11-25 21:26:38] 2025-11-26 00:53:37,458 | INFO     | [data] control thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:37,479 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:37,487 | INFO     | all payload control threads have been joined
[2025-11-25 21:26:38] 2025-11-26 00:53:37,513 | INFO     | [job] validate thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:37,823 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:37,879 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:38,207 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:38,220 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:38,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:26:38] 2025-11-26 00:53:38,338 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:38,410 | INFO     | [job] control thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:38,440 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:38,493 | INFO     | [payload] control thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:38,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:39,316 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:53:41,008 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:26:38] 2025-11-26 00:54:06,328 | INFO     | PID=3941548 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 21:26:38] 2025-11-26 00:54:06,328 | INFO     | .. there are 46 such processes running
[2025-11-25 21:26:38] 2025-11-26 00:54:06,329 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:26:38] 2025-11-26 00:54:06,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:26:38] 2025-11-26 00:54:06,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:26:38] 2025-11-26 00:54:14,525 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:26:38] 2025-11-26 00:54:15,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706076571456)>', '<ExcThread(monitor, started 139705706321664)>']
[2025-11-25 21:26:38] 2025-11-26 00:54:15,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:26:38] 2025-11-26 00:54:15,392 | INFO     | [monitor] control thread has ended
[2025-11-25 21:26:38] 2025-11-26 00:54:20,208 | INFO     | all workflow threads have been joined
[2025-11-25 21:26:38] 2025-11-26 00:54:20,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:26:38] 2025-11-26 00:54:20,208 | INFO     | traces error code: 0
[2025-11-25 21:26:38] 2025-11-26 00:54:20,208 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:26:38] 2025-11-26 00:54:20,400 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:26:38] 2025-11-26 00:54:20,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:26:38] 2025-11-26 00:54:20,423 [wrapper] pilotpid: 3941548
[2025-11-25 21:26:38] 2025-11-26 00:54:20,447 [wrapper] Pilot exit status: 0
[2025-11-25 21:26:38] 2025-11-26 00:54:20,496 [wrapper] pandaids: 6895386725
[2025-11-25 21:26:38] 2025-11-26 00:54:20,626 [wrapper] cleanup supervisor_pilot 4104200 3941549
[2025-11-25 21:26:38] 2025-11-26 00:54:20,645 [wrapper] Test setup, not cleaning
[2025-11-25 21:26:38] 2025-11-26 00:54:20,723 [wrapper] apfmon messages muted
[2025-11-25 21:26:38] 2025-11-26 00:54:20,874 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:26:38] 2025-11-26 00:54:20,905 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:26:38]  *** Error codes and diagnostics ***
[2025-11-25 21:26:38]     "exeErrorCode": 0,
[2025-11-25 21:26:38]     "exeErrorDiag": "",
[2025-11-25 21:26:38]     "pilotErrorCode": 0,
[2025-11-25 21:26:38]     "pilotErrorDiag": "",
[2025-11-25 21:26:38]  *** Listing of results directory ***
[2025-11-25 21:26:38] total 1331116
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:52 queuedata.json
[2025-11-25 21:26:38] -rwx------. 1 boincer umatlas     36292 Nov 24 00:53 runpilot2-wrapper.sh
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:26:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 21:26:38] -rw-r--r--. 2 boincer umatlas 409435273 Nov 25 00:03 EVNT.47483658._001252.pool.root.1
[2025-11-25 21:26:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 21:26:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 21:26:38] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:03 input.tar.gz
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:03 pandaJob.out
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas    991801 Nov 25 00:05 agis_schedconf.cvmfs.json
[2025-11-25 21:26:38] drwx------. 5 boincer umatlas      4096 Nov 25 00:05 pilot3
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas       533 Nov 25 19:30 boinc_task_state.xml
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas 927079900 Nov 25 19:52 HITS.47556149._002385.pool.root.1
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas      1072 Nov 25 19:52 memory_monitor_summary.json
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas   1516240 Nov 25 19:53 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas   2386178 Nov 25 19:53 log.47556149._002385.job.log.tgz.1
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas        95 Nov 25 19:53 pilot_heartbeat.json
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas      8658 Nov 25 19:53 heartbeat.json
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas      4824 Nov 25 19:54 pilotlog.txt
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas   8926930 Nov 25 19:54 log.47556149._002385.job.log.1
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas       353 Nov 25 19:54 output.list
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas       620 Nov 25 19:54 runtime_log
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas  11335680 Nov 25 19:54 result.tar.gz
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas      9353 Nov 25 19:54 runtime_log.err
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas       667 Nov 25 19:54 FH1KDmygeh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvwIKDmzQjjNm.diag
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas      6881 Nov 25 21:19 init_data.xml
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 21:26 boinc_mmap_file
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas        29 Nov 25 21:26 wrapper_checkpoint.txt
[2025-11-25 21:26:38] -rw-r--r--. 1 boincer umatlas     21601 Nov 25 21:26 stderr.txt
[2025-11-25 21:26:38] HITS file was successfully produced:
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas 927079900 Nov 25 19:52 shared/HITS.pool.root.1
[2025-11-25 21:26:38]  *** Contents of shared directory: ***
[2025-11-25 21:26:38] total 1316864
[2025-11-25 21:26:38] -rw-r--r--. 2 boincer umatlas 409435273 Nov 25 00:03 ATLAS.root_0
[2025-11-25 21:26:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 21:26:38] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:03 input.tar.gz
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas 927079900 Nov 25 19:52 HITS.pool.root.1
[2025-11-25 21:26:38] -rw-------. 1 boincer umatlas  11335680 Nov 25 19:54 result.tar.gz
21:27:00 (3929774): run_atlas exited; CPU time 264109.660912
21:27:00 (3929774): called boinc_finish(0)

</stderr_txt>
]]>

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