Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:55 (2785796): wrapper (7.7.26015): starting
00:03:55 (2785796): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:03:55] Arguments: --nthreads 12
[2025-11-25 00:03:55] Threads: 12
[2025-11-25 00:03:55] Checking for CVMFS
[2025-11-25 00:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:56] 2.13.2.0 8544 32493 184532 153270 2 843 30356859 40960000 22319 16776704 0 67405915 99.789 35865930 38468 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:03:56] CVMFS is ok
[2025-11-25 00:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:56] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:56] Checking for apptainer binary...
[2025-11-25 00:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:56] Running /usr/bin/apptainer --version
[2025-11-25 00:03:56] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:56] c-212-10.aglt2.org
[2025-11-25 00:03:56] apptainer works
[2025-11-25 00:03:56] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:03:56] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:03:56] Starting ATLAS job with PandaID=6895369420
[2025-11-25 00:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:33:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:33:01] 2025-11-26 15:32:07,733 | INFO     | this job has now completed (state=finished)
[2025-11-26 10:33:01] 2025-11-26 15:32:07,733 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 10:33:01] 2025-11-26 15:32:07,733 | INFO     | log transfer has been attempted: DONE
[2025-11-26 10:33:01] 2025-11-26 15:32:07,733 | INFO     | job 6895369420 has finished - writing final server update
[2025-11-26 10:33:01] 2025-11-26 15:32:07,733 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 10:33:01] 2025-11-26 15:32:07,750 | INFO     | executing command: lscpu
[2025-11-26 10:33:01] 2025-11-26 15:32:07,894 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 10:33:01] 2025-11-26 15:32:08,710 | INFO     | time since job start (124071s) is within the limit (172800.0s)
[2025-11-26 10:33:01] 2025-11-26 15:32:09,546 | INFO     | monitor loop #8089: job 0:6895369420 is in state 'finished'
[2025-11-26 10:33:01] 2025-11-26 15:32:09,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:33:01] 2025-11-26 15:32:10,717 | INFO     | time since job start (124073s) is within the limit (172800.0s)
[2025-11-26 10:33:01] 2025-11-26 15:32:12,050 | INFO     | monitor loop #8090: job 0:6895369420 is in state 'finished'
[2025-11-26 10:33:01] 2025-11-26 15:32:12,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:33:01] 2025-11-26 15:32:12,725 | INFO     | time since job start (124075s) is within the limit (172800.0s)
[2025-11-26 10:33:01] 2025-11-26 15:32:14,557 | INFO     | monitor loop #8091: job 0:6895369420 is in state 'finished'
[2025-11-26 10:33:01] 2025-11-26 15:32:14,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:33:01] 2025-11-26 15:32:14,732 | INFO     | time since job start (124077s) is within the limit (172800.0s)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,156 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 10:33:01] 2025-11-26 15:32:15,177 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2929.789718749999
[2025-11-26 10:33:01] 2025-11-26 15:32:15,193 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6895369420/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,194 | INFO     | extracted standard info from prmon json
[2025-11-26 10:33:01] 2025-11-26 15:32:15,194 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:33:01] 2025-11-26 15:32:15,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:33:01] 2025-11-26 15:32:15,220 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:33:01] 2025-11-26 15:32:15,222 | INFO     | sum of square deviations: 2609337640356.6636
[2025-11-26 10:33:01] 2025-11-26 15:32:15,303 | INFO     | sum of deviations: 59446948722932.19
[2025-11-26 10:33:01] 2025-11-26 15:32:15,304 | INFO     | mean x: 1764109109.071288
[2025-11-26 10:33:01] 2025-11-26 15:32:15,304 | INFO     | mean y: 6199106.0467059985
[2025-11-26 10:33:01] 2025-11-26 15:32:15,304 | INFO     | intersect: -40184423267.48557
[2025-11-26 10:33:01] 2025-11-26 15:32:15,306 | INFO     | chi2: 66.83638366045214
[2025-11-26 10:33:01] 2025-11-26 15:32:15,308 | INFO     | sum of square deviations: 2590142934281.786
[2025-11-26 10:33:01] 2025-11-26 15:32:15,384 | INFO     | sum of deviations: 61182964852427.24
[2025-11-26 10:33:01] 2025-11-26 15:32:15,384 | INFO     | mean x: 1764108956.5751603
[2025-11-26 10:33:01] 2025-11-26 15:32:15,384 | INFO     | mean y: 6212897.335633317
[2025-11-26 10:33:01] 2025-11-26 15:32:15,385 | INFO     | intersect: -41664621116.27787
[2025-11-26 10:33:01] 2025-11-26 15:32:15,386 | INFO     | chi2: 62.418919508179876
[2025-11-26 10:33:01] 2025-11-26 15:32:15,386 | INFO     | current chi2=62.418919508179876 (change=6.6093703913039965 %)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,386 | INFO     | right removable region: 2028
[2025-11-26 10:33:01] 2025-11-26 15:32:15,388 | INFO     | sum of square deviations: 2590141108553.9355
[2025-11-26 10:33:01] 2025-11-26 15:32:15,464 | INFO     | sum of deviations: 57847761929846.52
[2025-11-26 10:33:01] 2025-11-26 15:32:15,464 | INFO     | mean x: 1764109261.5746672
[2025-11-26 10:33:01] 2025-11-26 15:32:15,464 | INFO     | mean y: 6211807.461803844
[2025-11-26 10:33:01] 2025-11-26 15:32:15,464 | INFO     | intersect: -39393098231.97563
[2025-11-26 10:33:01] 2025-11-26 15:32:15,470 | INFO     | chi2: 63.3237750608694
[2025-11-26 10:33:01] 2025-11-26 15:32:15,470 | INFO     | current chi2=63.3237750608694 (change=5.255533598926885 %)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,470 | INFO     | left removable region: 10
[2025-11-26 10:33:01] 2025-11-26 15:32:15,472 | INFO     | sum of square deviations: 2548243661227.3115
[2025-11-26 10:33:01] 2025-11-26 15:32:15,563 | INFO     | sum of deviations: 58819138458272.445
[2025-11-26 10:33:01] 2025-11-26 15:32:15,563 | INFO     | mean x: 1764109231.0792863
[2025-11-26 10:33:01] 2025-11-26 15:32:15,563 | INFO     | mean y: 6237508.503964321
[2025-11-26 10:33:01] 2025-11-26 15:32:15,563 | INFO     | intersect: -40713332090.422646
[2025-11-26 10:33:01] 2025-11-26 15:32:15,565 | INFO     | chi2: 56.77750497436664
[2025-11-26 10:33:01] 2025-11-26 15:32:15,565 | INFO     | current memory leak: 23.08 B/s (using 2018 data points, chi2=56.78)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | could have reported an average CPU frequency of 3052 MHz (72 samples)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | ..............................
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . Timing measurements:
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . get job = 0 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . initial setup = 3 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . payload setup = 12 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . stage-in = 0 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . payload execution = 124026 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . stage-out = 4 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,567 | INFO     | . log creation = 1 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,568 | INFO     | ..............................
[2025-11-26 10:33:01] 2025-11-26 15:32:15,693 | INFO     | 
[2025-11-26 10:33:01] 2025-11-26 15:32:15,693 | INFO     | job summary report
[2025-11-26 10:33:01] 2025-11-26 15:32:15,693 | INFO     | --------------------------------------------------
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | PanDA job id: 6895369420
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | task id: 47556149
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | errors: (none)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | pilot state: finished 
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | transexitcode: 0
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | exeerrorcode: 0
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | exeerrordiag: 
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | exitcode: 0
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | exitmsg: OK
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | cpuconsumptiontime: 218978 s
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | nevents: 1000
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | neventsw: 0
[2025-11-26 10:33:01] 2025-11-26 15:32:15,694 | INFO     | pid: 2810646
[2025-11-26 10:33:01] 2025-11-26 15:32:15,695 | INFO     | pgrp: 2810646
[2025-11-26 10:33:01] 2025-11-26 15:32:15,695 | INFO     | corecount: 12
[2025-11-26 10:33:01] 2025-11-26 15:32:15,695 | INFO     | event service: False
[2025-11-26 10:33:01] 2025-11-26 15:32:15,695 | INFO     | sizes: {0: 2284309, 8: 2284571, 11: 2284599, 124043: 2367462, 124044: 2367461, 124049: 2376700, 124058: 2376890}
[2025-11-26 10:33:01] 2025-11-26 15:32:15,695 | INFO     | --------------------------------------------------
[2025-11-26 10:33:01] 2025-11-26 15:32:15,695 | INFO     | 
[2025-11-26 10:33:01] 2025-11-26 15:32:15,695 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 10:33:01] 2025-11-26 15:32:15,716 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,717 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:33:01] 2025-11-26 15:32:15,718 | INFO     | job 6895369420 has completed (purged errors)
[2025-11-26 10:33:01] 2025-11-26 15:32:15,719 | INFO     | overall cleanup function is called
[2025-11-26 10:33:01] 2025-11-26 15:32:16,741 | INFO     | --- collectZombieJob: --- 10, [2810646]
[2025-11-26 10:33:01] 2025-11-26 15:32:16,741 | INFO     | zombie collector waiting for pid 2810646
[2025-11-26 10:33:01] 2025-11-26 15:32:16,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:33:01] 2025-11-26 15:32:16,741 | INFO     | collected zombie processes
[2025-11-26 10:33:01] 2025-11-26 15:32:16,741 | INFO     | will attempt to kill all subprocesses of pid=2810646
[2025-11-26 10:33:01] 2025-11-26 15:32:17,149 | INFO     | process IDs to be killed: [2810646] (in reverse order)
[2025-11-26 10:33:01] 2025-11-26 15:32:17,299 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:33:01] 2025-11-26 15:32:17,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:33:01] 2025-11-26 15:32:17,317 | INFO     | did not find any defunct processes belonging to 2810646
[2025-11-26 10:33:01] 2025-11-26 15:32:17,333 | INFO     | did not find any defunct processes belonging to 2810646
[2025-11-26 10:33:01] 2025-11-26 15:32:17,334 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:33:01] 2025-11-26 15:32:17,334 | INFO     | ready for new job
[2025-11-26 10:33:01] 2025-11-26 15:32:17,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:33:01] 2025-11-26 15:32:17,348 | INFO     | ***************************************
[2025-11-26 10:33:01] 2025-11-26 15:32:17,348 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:33:01] 2025-11-26 15:32:17,348 | INFO     | ***************************************
[2025-11-26 10:33:01] 2025-11-26 15:32:17,348 | INFO     | 
[2025-11-26 10:33:01] 2025-11-26 15:32:17,353 | INFO     | architecture information:
[2025-11-26 10:33:01] 2025-11-26 15:32:17,354 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:33:01] 2025-11-26 15:32:17,432 | INFO     | cat /etc/os-release:
[2025-11-26 10:33:01] NAME="CentOS Linux"
[2025-11-26 10:33:01] VERSION="7 (Core)"
[2025-11-26 10:33:01] ID="centos"
[2025-11-26 10:33:01] ID_LIKE="rhel fedora"
[2025-11-26 10:33:01] VERSION_ID="7"
[2025-11-26 10:33:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:33:01] ANSI_COLOR="0;31"
[2025-11-26 10:33:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:33:01] HOME_URL="https://www.centos.org/"
[2025-11-26 10:33:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:33:01] 
[2025-11-26 10:33:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:33:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:33:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:33:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:33:01] 
[2025-11-26 10:33:01] 2025-11-26 15:32:17,433 | INFO     | ***************************************
[2025-11-26 10:33:01] 2025-11-26 15:32:17,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 10:33:01] 2025-11-26 15:32:17,984 | INFO     | sufficient remaining disk space (121156665344 B)
[2025-11-26 10:33:01] 2025-11-26 15:32:17,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:33:01] 2025-11-26 15:32:17,985 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:33:01] 2025-11-26 15:32:17,985 | INFO     | update_server=False
[2025-11-26 10:33:01] 2025-11-26 15:32:17,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:33:01] 2025-11-26 15:32:17,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:33:01] 2025-11-26 15:32:17,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:33:01] 2025-11-26 15:32:18,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:33:01] 2025-11-26 15:32:18,080 | INFO     | aborting loop
[2025-11-26 10:33:01] 2025-11-26 15:32:18,685 | INFO     | all payload control threads have been joined
[2025-11-26 10:33:01] 2025-11-26 15:32:18,803 | INFO     | all data control threads have been joined
[2025-11-26 10:33:01] 2025-11-26 15:32:18,991 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,002 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,085 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,122 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,222 | INFO     | all job control threads have been joined
[2025-11-26 10:33:01] 2025-11-26 15:32:19,453 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,603 | INFO     | [job] validate thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,691 | INFO     | [payload] control thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,809 | INFO     | [data] control thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,953 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:19,992 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:20,228 | INFO     | [job] control thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:20,357 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:20,488 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:20,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:33:01] 2025-11-26 15:32:21,731 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:21,993 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:33:01] 2025-11-26 15:32:48,492 | INFO     | PID=2793379 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:33:01] 2025-11-26 15:32:48,499 | INFO     | .. there are 18 such processes running
[2025-11-26 10:33:01] 2025-11-26 15:32:48,504 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:33:01] 2025-11-26 15:32:48,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:33:01] 2025-11-26 15:32:48,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:33:01] 2025-11-26 15:32:54,862 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:33:01] 2025-11-26 15:32:55,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993916168000)>', '<ExcThread(monitor, started 139993553024768)>']
[2025-11-26 10:33:01] 2025-11-26 15:32:55,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:33:01] 2025-11-26 15:32:55,545 | INFO     | [monitor] control thread has ended
[2025-11-26 10:33:01] 2025-11-26 15:33:00,057 | INFO     | all workflow threads have been joined
[2025-11-26 10:33:01] 2025-11-26 15:33:00,057 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:33:01] 2025-11-26 15:33:00,061 | INFO     | traces error code: 0
[2025-11-26 10:33:01] 2025-11-26 15:33:00,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:33:01] 2025-11-26 15:33:01,257 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:33:01] 2025-11-26 15:33:01,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:33:01] 2025-11-26 15:33:01,269 [wrapper] pilotpid: 2793379
[2025-11-26 10:33:01] 2025-11-26 15:33:01,272 [wrapper] Pilot exit status: 0
[2025-11-26 10:33:01] 2025-11-26 15:33:01,316 [wrapper] pandaids: 6895369420
[2025-11-26 10:33:01] 2025-11-26 15:33:01,421 [wrapper] cleanup supervisor_pilot 3033151 2793380
[2025-11-26 10:33:01] 2025-11-26 15:33:01,425 [wrapper] Test setup, not cleaning
[2025-11-26 10:33:01] 2025-11-26 15:33:01,429 [wrapper] apfmon messages muted
[2025-11-26 10:33:01] 2025-11-26 15:33:01,432 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:33:01] 2025-11-26 15:33:01,435 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:33:01]  *** Error codes and diagnostics ***
[2025-11-26 10:33:01]     "exeErrorCode": 0,
[2025-11-26 10:33:01]     "exeErrorDiag": "",
[2025-11-26 10:33:01]     "pilotErrorCode": 0,
[2025-11-26 10:33:01]     "pilotErrorDiag": "",
[2025-11-26 10:33:01]  *** Listing of results directory ***
[2025-11-26 10:33:01] total 1344788
[2025-11-26 10:33:01] -rwx------. 1 boincer umatlas     36292 Nov 23 15:16 runpilot2-wrapper.sh
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 15:16 queuedata.json
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 15:16 pilot3.tar.gz
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:33:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-26 10:33:01] -rw-r--r--. 2 boincer umatlas 410614062 Nov 25 00:03 EVNT.47483658._001191.pool.root.1
[2025-11-26 10:33:01] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 00:03 input.tar.gz
[2025-11-26 10:33:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-26 10:33:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:03 pandaJob.out
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-26 10:33:01] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas       534 Nov 26 10:21 boinc_task_state.xml
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas 923059666 Nov 26 10:30 HITS.47556149._001775.pool.root.1
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas      6951 Nov 26 10:30 init_data.xml
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas      1078 Nov 26 10:31 memory_monitor_summary.json
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas   1516240 Nov 26 10:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas   3402564 Nov 26 10:32 log.47556149._001775.job.log.tgz.1
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas      8646 Nov 26 10:32 heartbeat.json
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas        95 Nov 26 10:32 pilot_heartbeat.json
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 10:32 boinc_mmap_file
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas        30 Nov 26 10:32 wrapper_checkpoint.txt
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas      4825 Nov 26 10:33 pilotlog.txt
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas  16329329 Nov 26 10:33 log.47556149._001775.job.log.1
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas       353 Nov 26 10:33 output.list
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas       620 Nov 26 10:33 runtime_log
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas  19752960 Nov 26 10:33 result.tar.gz
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas      9346 Nov 26 10:33 runtime_log.err
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas       671 Nov 26 10:33 3S6LDmtgVh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvjIKDmHhXn3n.diag
[2025-11-26 10:33:01] -rw-r--r--. 1 boincer umatlas     21760 Nov 26 10:33 stderr.txt
[2025-11-26 10:33:01] HITS file was successfully produced:
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas 923059666 Nov 26 10:30 shared/HITS.pool.root.1
[2025-11-26 10:33:01]  *** Contents of shared directory: ***
[2025-11-26 10:33:01] total 1322316
[2025-11-26 10:33:01] -rw-r--r--. 2 boincer umatlas 410614062 Nov 25 00:03 ATLAS.root_0
[2025-11-26 10:33:01] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 00:03 input.tar.gz
[2025-11-26 10:33:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas 923059666 Nov 26 10:30 HITS.pool.root.1
[2025-11-26 10:33:01] -rw-------. 1 boincer umatlas  19752960 Nov 26 10:33 result.tar.gz
10:33:03 (2785796): run_atlas exited; CPU time 218925.028696
10:33:03 (2785796): called boinc_finish(0)

</stderr_txt>
]]>

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