Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:07:33 (605393): wrapper (7.7.26015): starting
12:07:33 (605393): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:07:33] Arguments: --nthreads 8
[2025-11-25 12:07:33] Threads: 8
[2025-11-25 12:07:33] Checking for CVMFS
[2025-11-25 12:07:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:07:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:07:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:07:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:07:34] 2.13.3.0 11334 28889 336604 153289 0 335 21102285 32935936 30548 16776704 0 122957874 99.508 163400611 40795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 12:07:34] CVMFS is ok
[2025-11-25 12:07:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:07:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:07:34] Further information can be found at the LHC@home message board.
[2025-11-25 12:07:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:07:34] Checking for apptainer binary...
[2025-11-25 12:07:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:07:34] Running /usr/bin/apptainer --version
[2025-11-25 12:07:34] apptainer version 1.4.4-1.el9
[2025-11-25 12:07:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:07:35] c6-4-5-2.aglt2.org
[2025-11-25 12:07:35] apptainer works
[2025-11-25 12:07:35] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:07:35] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:07:35] Starting ATLAS job with PandaID=6895386585
[2025-11-25 12:07:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 01:21:58]  *** The last 200 lines of the pilot log: ***
[2025-11-26 01:21:58] 2025-11-26 06:20:42,716 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 01:21:58] 2025-11-26 06:20:42,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 01:21:58] 2025-11-26 06:20:42,741 | INFO     | fitting pss+swap vs Time
[2025-11-26 01:21:58] 2025-11-26 06:20:42,747 | INFO     | sum of square deviations: 146015023127.28665
[2025-11-26 01:21:58] 2025-11-26 06:20:42,771 | INFO     | sum of deviations: 1277897700888.6184
[2025-11-26 01:21:58] 2025-11-26 06:20:42,771 | INFO     | mean x: 1764114259.4357326
[2025-11-26 01:21:58] 2025-11-26 06:20:42,771 | INFO     | mean y: 2901495.0424164524
[2025-11-26 01:21:58] 2025-11-26 06:20:42,771 | INFO     | intersect: -15436315018.127905
[2025-11-26 01:21:58] 2025-11-26 06:20:42,772 | INFO     | chi2: 7.885113945012913
[2025-11-26 01:21:58] 2025-11-26 06:20:42,773 | INFO     | sum of square deviations: 143217974110.38022
[2025-11-26 01:21:58] 2025-11-26 06:20:42,795 | INFO     | sum of deviations: 1545092281596.2002
[2025-11-26 01:21:58] 2025-11-26 06:20:42,795 | INFO     | mean x: 1764114106.9417853
[2025-11-26 01:21:58] 2025-11-26 06:20:42,795 | INFO     | mean y: 2916064.448900388
[2025-11-26 01:21:58] 2025-11-26 06:20:42,795 | INFO     | intersect: -19029046281.21292
[2025-11-26 01:21:58] 2025-11-26 06:20:42,796 | INFO     | chi2: 4.631767941287492
[2025-11-26 01:21:58] 2025-11-26 06:20:42,796 | INFO     | current chi2=4.631767941287492 (change=41.25934040284934 %)
[2025-11-26 01:21:58] 2025-11-26 06:20:42,797 | INFO     | sum of square deviations: 140456879255.91672
[2025-11-26 01:21:58] 2025-11-26 06:20:42,819 | INFO     | sum of deviations: 1710431515621.893
[2025-11-26 01:21:58] 2025-11-26 06:20:42,820 | INFO     | mean x: 1764113954.4479167
[2025-11-26 01:21:58] 2025-11-26 06:20:42,820 | INFO     | mean y: 2925182.4973958335
[2025-11-26 01:21:58] 2025-11-26 06:20:42,820 | INFO     | intersect: -21479796922.827854
[2025-11-26 01:21:58] 2025-11-26 06:20:42,821 | INFO     | chi2: 3.0104959406242218
[2025-11-26 01:21:58] 2025-11-26 06:20:42,821 | INFO     | current chi2=3.0104959406242218 (change=35.00330805028643 %)
[2025-11-26 01:21:58] 2025-11-26 06:20:42,826 | INFO     | sum of square deviations: 137731412429.20566
[2025-11-26 01:21:58] 2025-11-26 06:20:42,850 | INFO     | sum of deviations: 1694916770358.9504
[2025-11-26 01:21:58] 2025-11-26 06:20:42,850 | INFO     | mean x: 1764113801.951507
[2025-11-26 01:21:58] 2025-11-26 06:20:42,850 | INFO     | mean y: 2924311.782437746
[2025-11-26 01:21:58] 2025-11-26 06:20:42,850 | INFO     | intersect: -21706183400.20142
[2025-11-26 01:21:58] 2025-11-26 06:20:42,851 | INFO     | chi2: 2.9902696614932567
[2025-11-26 01:21:58] 2025-11-26 06:20:42,851 | INFO     | current chi2=2.9902696614932567 (change=0.6718587079965036 %)
[2025-11-26 01:21:58] 2025-11-26 06:20:42,851 | INFO     | right removable region: 762
[2025-11-26 01:21:58] 2025-11-26 06:20:42,856 | INFO     | sum of square deviations: 143217530030.38028
[2025-11-26 01:21:58] 2025-11-26 06:20:42,872 | INFO     | sum of deviations: 1018861863467.4742
[2025-11-26 01:21:58] 2025-11-26 06:20:42,872 | INFO     | mean x: 1764114411.9417853
[2025-11-26 01:21:58] 2025-11-26 06:20:42,872 | INFO     | mean y: 2915606.3661060804
[2025-11-26 01:21:58] 2025-11-26 06:20:42,872 | INFO     | intersect: -12547146503.62532
[2025-11-26 01:21:58] 2025-11-26 06:20:42,877 | INFO     | chi2: 5.089594785641956
[2025-11-26 01:21:58] 2025-11-26 06:20:42,877 | INFO     | current chi2=5.089594785641956 (change=35.453123174447406 %)
[2025-11-26 01:21:58] 2025-11-26 06:20:42,878 | INFO     | sum of square deviations: 140456132679.59244
[2025-11-26 01:21:58] 2025-11-26 06:20:42,897 | INFO     | sum of deviations: 956212677852.0344
[2025-11-26 01:21:58] 2025-11-26 06:20:42,897 | INFO     | mean x: 1764114564.4440105
[2025-11-26 01:21:58] 2025-11-26 06:20:42,897 | INFO     | mean y: 2919064.7682291665
[2025-11-26 01:21:58] 2025-11-26 06:20:42,897 | INFO     | intersect: -12007013712.982786
[2025-11-26 01:21:58] 2025-11-26 06:20:42,898 | INFO     | chi2: 5.013263757132478
[2025-11-26 01:21:58] 2025-11-26 06:20:42,898 | INFO     | current chi2=5.013263757132478 (change=1.4997466738376173 %)
[2025-11-26 01:21:58] 2025-11-26 06:20:42,898 | INFO     | left removable region: 20
[2025-11-26 01:21:58] 2025-11-26 06:20:42,899 | INFO     | sum of square deviations: 126668180692.72365
[2025-11-26 01:21:58] 2025-11-26 06:20:42,909 | INFO     | sum of deviations: 1288831832455.7932
[2025-11-26 01:21:58] 2025-11-26 06:20:42,909 | INFO     | mean x: 1764114381.467655
[2025-11-26 01:21:58] 2025-11-26 06:20:42,909 | INFO     | mean y: 2947037.283018868
[2025-11-26 01:21:58] 2025-11-26 06:20:42,909 | INFO     | intersect: -17946681342.113003
[2025-11-26 01:21:58] 2025-11-26 06:20:42,922 | INFO     | chi2: 0.05010316490217556
[2025-11-26 01:21:58] 2025-11-26 06:20:42,922 | INFO     | current memory leak: 10.17 B/s (using 742 data points, chi2=0.05)
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | could have reported an average CPU frequency of 3162 MHz (29 samples)
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | ..............................
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | . Timing measurements:
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | . get job = 0 s
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | . initial setup = 3 s
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | . payload setup = 20 s
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | . stage-in = 0 s
[2025-11-26 01:21:58] 2025-11-26 06:20:42,923 | INFO     | . payload execution = 47462 s
[2025-11-26 01:21:58] 2025-11-26 06:20:42,924 | INFO     | . stage-out = 5 s
[2025-11-26 01:21:58] 2025-11-26 06:20:42,924 | INFO     | . log creation = 1 s
[2025-11-26 01:21:58] 2025-11-26 06:20:42,924 | INFO     | ..............................
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | 
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | job summary report
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | --------------------------------------------------
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | PanDA job id: 6895386585
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | task id: 47556149
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | errors: (none)
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | pilot state: finished 
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | transexitcode: 0
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | exeerrorcode: 0
[2025-11-26 01:21:58] 2025-11-26 06:20:43,326 | INFO     | exeerrordiag: 
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | exitcode: 0
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | exitmsg: OK
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | cpuconsumptiontime: 218786 s
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | nevents: 1000
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | neventsw: 0
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | pid: 617547
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | pgrp: 617547
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | corecount: 8
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | event service: False
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284632, 23: 2284632, 47487: 2332696, 47494: 2341690, 47496: 2341874, 47520: 2342120}
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | --------------------------------------------------
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | 
[2025-11-26 01:21:58] 2025-11-26 06:20:43,327 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 01:21:58] 2025-11-26 06:20:43,454 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,454 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,454 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,454 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,454 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 01:21:58] 2025-11-26 06:20:43,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,456 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 01:21:58] 2025-11-26 06:20:43,456 | INFO     | job 6895386585 has completed (purged errors)
[2025-11-26 01:21:58] 2025-11-26 06:20:43,456 | INFO     | overall cleanup function is called
[2025-11-26 01:21:58] 2025-11-26 06:20:44,471 | INFO     | --- collectZombieJob: --- 10, [617547]
[2025-11-26 01:21:58] 2025-11-26 06:20:44,471 | INFO     | zombie collector waiting for pid 617547
[2025-11-26 01:21:58] 2025-11-26 06:20:44,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 01:21:58] 2025-11-26 06:20:44,471 | INFO     | collected zombie processes
[2025-11-26 01:21:58] 2025-11-26 06:20:44,471 | INFO     | will attempt to kill all subprocesses of pid=617547
[2025-11-26 01:21:58] 2025-11-26 06:20:45,242 | INFO     | process IDs to be killed: [617547] (in reverse order)
[2025-11-26 01:21:58] 2025-11-26 06:20:45,453 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 01:21:58] 2025-11-26 06:20:45,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 01:21:58] 2025-11-26 06:20:45,483 | INFO     | did not find any defunct processes belonging to 617547
[2025-11-26 01:21:58] 2025-11-26 06:20:45,543 | INFO     | did not find any defunct processes belonging to 617547
[2025-11-26 01:21:58] 2025-11-26 06:20:45,549 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 01:21:58] 2025-11-26 06:20:45,549 | INFO     | ready for new job
[2025-11-26 01:21:58] 2025-11-26 06:20:45,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 01:21:58] 2025-11-26 06:20:45,553 | INFO     | ***************************************
[2025-11-26 01:21:58] 2025-11-26 06:20:45,553 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 01:21:58] 2025-11-26 06:20:45,553 | INFO     | ***************************************
[2025-11-26 01:21:58] 2025-11-26 06:20:45,553 | INFO     | 
[2025-11-26 01:21:58] 2025-11-26 06:20:45,561 | INFO     | architecture information:
[2025-11-26 01:21:58] 2025-11-26 06:20:45,562 | INFO     | executing command: cat /etc/os-release
[2025-11-26 01:21:58] 2025-11-26 06:20:45,601 | INFO     | cat /etc/os-release:
[2025-11-26 01:21:58] NAME="CentOS Linux"
[2025-11-26 01:21:58] VERSION="7 (Core)"
[2025-11-26 01:21:58] ID="centos"
[2025-11-26 01:21:58] ID_LIKE="rhel fedora"
[2025-11-26 01:21:58] VERSION_ID="7"
[2025-11-26 01:21:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 01:21:58] ANSI_COLOR="0;31"
[2025-11-26 01:21:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 01:21:58] HOME_URL="https://www.centos.org/"
[2025-11-26 01:21:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 01:21:58] 
[2025-11-26 01:21:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 01:21:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 01:21:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 01:21:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 01:21:58] 
[2025-11-26 01:21:58] 2025-11-26 06:20:45,602 | INFO     | ***************************************
[2025-11-26 01:21:58] 2025-11-26 06:20:46,108 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 01:21:58] 2025-11-26 06:20:46,197 | INFO     | sufficient remaining disk space (68627202048 B)
[2025-11-26 01:21:58] 2025-11-26 06:20:46,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 01:21:58] 2025-11-26 06:20:46,197 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 01:21:58] 2025-11-26 06:20:46,197 | INFO     | update_server=False
[2025-11-26 01:21:58] 2025-11-26 06:20:46,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 01:21:58] 2025-11-26 06:20:46,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 01:21:58] 2025-11-26 06:20:46,351 | INFO     | all payload control threads have been joined
[2025-11-26 01:21:58] 2025-11-26 06:20:46,692 | INFO     | all data control threads have been joined
[2025-11-26 01:21:58] 2025-11-26 06:20:47,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:21:58] 2025-11-26 06:20:47,170 | INFO     | aborting loop
[2025-11-26 01:21:58] 2025-11-26 06:20:47,204 | INFO     | [job] retrieve thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:47,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:47,248 | INFO     | all job control threads have been joined
[2025-11-26 01:21:58] 2025-11-26 06:20:47,317 | INFO     | [payload] validate_post thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:47,360 | INFO     | [payload] control thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:47,420 | INFO     | [payload] failed_post thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:47,697 | INFO     | [data] control thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:47,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 01:21:58] 2025-11-26 06:20:47,858 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:47,995 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:48,061 | INFO     | [job] validate thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:48,108 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:48,176 | INFO     | [job] job monitor thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:48,209 | INFO     | [data] copytool_out thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:48,254 | INFO     | [job] control thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:48,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 01:21:58] 2025-11-26 06:20:48,383 | INFO     | [data] copytool_in thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:49,381 | INFO     | [job] queue monitor thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:20:51,864 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 01:21:58] 2025-11-26 06:21:15,728 | INFO     | PID=609580 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 01:21:58] 2025-11-26 06:21:15,728 | INFO     | .. there are 48 such processes running
[2025-11-26 01:21:58] 2025-11-26 06:21:15,728 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 01:21:58] 2025-11-26 06:21:15,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 01:21:58] 2025-11-26 06:21:15,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 01:21:58] 2025-11-26 06:21:30,252 | INFO     | [monitor] cgroup control has ended
[2025-11-26 01:21:58] 2025-11-26 06:21:32,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140139628095296)>', '<ExcThread(monitor, started 140139128936192)>']
[2025-11-26 01:21:58] 2025-11-26 06:21:32,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 01:21:58] 2025-11-26 06:21:32,880 | INFO     | [monitor] control thread has ended
[2025-11-26 01:21:58] 2025-11-26 06:21:37,319 | INFO     | all workflow threads have been joined
[2025-11-26 01:21:58] 2025-11-26 06:21:37,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 01:21:58] 2025-11-26 06:21:37,319 | INFO     | traces error code: 0
[2025-11-26 01:21:58] 2025-11-26 06:21:37,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 01:21:58] 2025-11-26 06:21:37,682 [wrapper] ==== pilot stdout END ====
[2025-11-26 01:21:58] 2025-11-26 06:21:37,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 01:21:58] 2025-11-26 06:21:37,746 [wrapper] pilotpid: 609580
[2025-11-26 01:21:58] 2025-11-26 06:21:37,777 [wrapper] Pilot exit status: 0
[2025-11-26 01:21:58] 2025-11-26 06:21:37,849 [wrapper] pandaids: 6895386585
[2025-11-26 01:21:58] 2025-11-26 06:21:38,062 [wrapper] cleanup supervisor_pilot  525485 609581
[2025-11-26 01:21:58] 2025-11-26 06:21:38,079 [wrapper] Test setup, not cleaning
[2025-11-26 01:21:58] 2025-11-26 06:21:38,082 [wrapper] apfmon messages muted
[2025-11-26 01:21:58] 2025-11-26 06:21:38,094 [wrapper] ==== wrapper stdout END ====
[2025-11-26 01:21:58] 2025-11-26 06:21:38,105 [wrapper] ==== wrapper stderr END ====
[2025-11-26 01:21:58]  *** Error codes and diagnostics ***
[2025-11-26 01:21:58]     "exeErrorCode": 0,
[2025-11-26 01:21:58]     "exeErrorDiag": "",
[2025-11-26 01:21:58]     "pilotErrorCode": 0,
[2025-11-26 01:21:58]     "pilotErrorDiag": "",
[2025-11-26 01:21:58]  *** Listing of results directory ***
[2025-11-26 01:21:58] total 1321192
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-26 01:21:58] -rwx------. 1 boincer umatlas     36292 Nov 24 00:41 runpilot2-wrapper.sh
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:41 queuedata.json
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 01:21:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:07 run_atlas
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:07 job.xml
[2025-11-26 01:21:58] -rw-r--r--. 2 boincer umatlas 408376747 Nov 25 12:07 EVNT.47483658._001249.pool.root.1
[2025-11-26 01:21:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:07 start_atlas.sh
[2025-11-26 01:21:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:07 shared
[2025-11-26 01:21:58] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 12:07 input.tar.gz
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:07 boinc_lockfile
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 12:07 pandaJob.out
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas        57 Nov 25 12:07 setup.sh.local
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas    991543 Nov 25 12:08 agis_schedconf.cvmfs.json
[2025-11-26 01:21:58] drwx------. 5 boincer umatlas      4096 Nov 25 12:08 pilot3
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas       533 Nov 26 01:08 boinc_task_state.xml
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas 924089956 Nov 26 01:19 HITS.47556149._002356.pool.root.1
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas      1062 Nov 26 01:20 memory_monitor_summary.json
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas   1516240 Nov 26 01:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas   1989713 Nov 26 01:20 log.47556149._002356.job.log.tgz.1
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas        95 Nov 26 01:20 pilot_heartbeat.json
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas      8624 Nov 26 01:20 heartbeat.json
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas      6876 Nov 26 01:21 init_data.xml
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas      4823 Nov 26 01:21 pilotlog.txt
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas   6267352 Nov 26 01:21 log.47556149._002356.job.log.1
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas       353 Nov 26 01:21 output.list
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas       620 Nov 26 01:21 runtime_log
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas   8273920 Nov 26 01:21 result.tar.gz
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 01:21 runtime_log.err
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas       660 Nov 26 01:21 7OUMDmtVeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNULKDmQoj2om.diag
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 01:21 boinc_mmap_file
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas        29 Nov 26 01:21 wrapper_checkpoint.txt
[2025-11-26 01:21:58] -rw-r--r--. 1 boincer umatlas     21132 Nov 26 01:21 stderr.txt
[2025-11-26 01:21:58] HITS file was successfully produced:
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas 924089956 Nov 26 01:19 shared/HITS.pool.root.1
[2025-11-26 01:21:58]  *** Contents of shared directory: ***
[2025-11-26 01:21:58] total 1309924
[2025-11-26 01:21:58] -rw-r--r--. 2 boincer umatlas 408376747 Nov 25 12:07 ATLAS.root_0
[2025-11-26 01:21:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:07 start_atlas.sh
[2025-11-26 01:21:58] -rw-r--r--. 2 boincer umatlas    590107 Nov 25 12:07 input.tar.gz
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas 924089956 Nov 26 01:19 HITS.pool.root.1
[2025-11-26 01:21:58] -rw-------. 1 boincer umatlas   8273920 Nov 26 01:21 result.tar.gz
01:22:00 (605393): run_atlas exited; CPU time 220149.943662
01:22:00 (605393): called boinc_finish(0)

</stderr_txt>
]]>

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