Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:42:15 (3341229): wrapper (7.7.26015): starting
12:42:15 (3341229): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 12:42:15] Arguments: --nthreads 8
[2025-11-25 12:42:15] Threads: 8
[2025-11-25 12:42:15] Checking for CVMFS
[2025-11-25 12:42:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:42:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:42:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:42:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:42:16] 2.13.3.0 9955 28879 307248 153291 1 507 26046882 32935937 28793 16776704 0 167772925 99.790 91649302 33023 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 12:42:16] CVMFS is ok
[2025-11-25 12:42:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:42:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 12:42:16] Further information can be found at the LHC@home message board.
[2025-11-25 12:42:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:42:16] Checking for apptainer binary...
[2025-11-25 12:42:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:42:16] Running /usr/bin/apptainer --version
[2025-11-25 12:42:16] apptainer version 1.4.4-1.el9
[2025-11-25 12:42:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:42:17] c-5-1.aglt2.org
[2025-11-25 12:42:17] apptainer works
[2025-11-25 12:42:17] Set ATHENA_PROC_NUMBER=8
[2025-11-25 12:42:17] Set ATHENA_CORE_NUMBER=8
[2025-11-25 12:42:17] Starting ATLAS job with PandaID=6895386554
[2025-11-25 12:42:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:47:24]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:47:24] 2025-11-26 12:46:41,451 | INFO     | monitor loop #4167: job 0:6895386554 is in state 'finished'
[2025-11-26 07:47:24] 2025-11-26 12:46:41,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:47:24] 2025-11-26 12:46:42,845 | INFO     | time since job start (68618s) is within the limit (172800.0s)
[2025-11-26 07:47:24] 2025-11-26 12:46:43,985 | INFO     | monitor loop #4168: job 0:6895386554 is in state 'finished'
[2025-11-26 07:47:24] 2025-11-26 12:46:43,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:47:24] 2025-11-26 12:46:46,516 | INFO     | monitor loop #4169: job 0:6895386554 is in state 'finished'
[2025-11-26 07:47:24] 2025-11-26 12:46:46,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:47:24] 2025-11-26 12:46:47,274 | INFO     | PID=3346893 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:47:24] 2025-11-26 12:46:47,274 | INFO     | .. there are 44 such processes running
[2025-11-26 07:47:24] 2025-11-26 12:46:48,250 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 07:47:24] 2025-11-26 12:46:48,260 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.03745
[2025-11-26 07:47:24] 2025-11-26 12:46:48,269 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895386554/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:47:24] 2025-11-26 12:46:48,270 | INFO     | extracted standard info from prmon json
[2025-11-26 07:47:24] 2025-11-26 12:46:48,270 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:47:24] 2025-11-26 12:46:48,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:47:24] 2025-11-26 12:46:48,287 | INFO     | time since job start (68624s) is within the limit (172800.0s)
[2025-11-26 07:47:24] 2025-11-26 12:46:48,352 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:47:24] 2025-11-26 12:46:48,354 | INFO     | sum of square deviations: 439180962232.55963
[2025-11-26 07:47:24] 2025-11-26 12:46:48,461 | INFO     | sum of deviations: 2458712368906.6245
[2025-11-26 07:47:24] 2025-11-26 12:46:48,461 | INFO     | mean x: 1764126915.652716
[2025-11-26 07:47:24] 2025-11-26 12:46:48,461 | INFO     | mean y: 2935126.975957257
[2025-11-26 07:47:24] 2025-11-26 12:46:48,461 | INFO     | intersect: -9873359705.539116
[2025-11-26 07:47:24] 2025-11-26 12:46:48,469 | INFO     | chi2: 14.21104151678859
[2025-11-26 07:47:24] 2025-11-26 12:46:48,471 | INFO     | sum of square deviations: 433341713217.6605
[2025-11-26 07:47:24] 2025-11-26 12:46:48,579 | INFO     | sum of deviations: 2854362320140.222
[2025-11-26 07:47:24] 2025-11-26 12:46:48,579 | INFO     | mean x: 1764126763.1592128
[2025-11-26 07:47:24] 2025-11-26 12:46:48,579 | INFO     | mean y: 2945456.3864042936
[2025-11-26 07:47:24] 2025-11-26 12:46:48,588 | INFO     | intersect: -11617115126.572899
[2025-11-26 07:47:24] 2025-11-26 12:46:48,590 | INFO     | chi2: 10.778956962559072
[2025-11-26 07:47:24] 2025-11-26 12:46:48,590 | INFO     | current chi2=10.778956962559072 (change=24.15083053676914 %)
[2025-11-26 07:47:24] 2025-11-26 12:46:48,590 | INFO     | right removable region: 1117
[2025-11-26 07:47:24] 2025-11-26 12:46:48,591 | INFO     | sum of square deviations: 433340649436.3408
[2025-11-26 07:47:24] 2025-11-26 12:46:48,702 | INFO     | sum of deviations: 2006101343319.44
[2025-11-26 07:47:24] 2025-11-26 12:46:48,702 | INFO     | mean x: 1764127068.1601074
[2025-11-26 07:47:24] 2025-11-26 12:46:48,711 | INFO     | mean y: 2946944.67352415
[2025-11-26 07:47:24] 2025-11-26 12:46:48,711 | INFO     | intersect: -8163879051.977108
[2025-11-26 07:47:24] 2025-11-26 12:46:48,718 | INFO     | chi2: 10.250512008425686
[2025-11-26 07:47:24] 2025-11-26 12:46:48,718 | INFO     | current chi2=10.250512008425686 (change=27.869382435369204 %)
[2025-11-26 07:47:24] 2025-11-26 12:46:48,719 | INFO     | sum of square deviations: 427552473525.66595
[2025-11-26 07:47:24] 2025-11-26 12:46:48,899 | INFO     | sum of deviations: 1794505490100.4731
[2025-11-26 07:47:24] 2025-11-26 12:46:48,899 | INFO     | mean x: 1764127220.6657681
[2025-11-26 07:47:24] 2025-11-26 12:46:48,899 | INFO     | mean y: 2952513.1410601977
[2025-11-26 07:47:24] 2025-11-26 12:46:48,899 | INFO     | intersect: -7401369011.688971
[2025-11-26 07:47:24] 2025-11-26 12:46:48,901 | INFO     | chi2: 9.308313059086267
[2025-11-26 07:47:24] 2025-11-26 12:46:48,901 | INFO     | current chi2=9.308313059086267 (change=9.19172572613888 %)
[2025-11-26 07:47:24] 2025-11-26 12:46:48,901 | INFO     | left removable region: 20
[2025-11-26 07:47:24] 2025-11-26 12:46:48,907 | INFO     | sum of square deviations: 409378782419.76465
[2025-11-26 07:47:24] 2025-11-26 12:46:48,971 | INFO     | sum of deviations: 2142408451257.8455
[2025-11-26 07:47:24] 2025-11-26 12:46:48,971 | INFO     | mean x: 1764127342.6773016
[2025-11-26 07:47:24] 2025-11-26 12:46:48,971 | INFO     | mean y: 2968638.0419325433
[2025-11-26 07:47:24] 2025-11-26 12:46:48,976 | INFO     | intersect: -9229266862.066448
[2025-11-26 07:47:24] 2025-11-26 12:46:48,978 | INFO     | chi2: 5.084428979943923
[2025-11-26 07:47:24] 2025-11-26 12:46:48,978 | INFO     | current memory leak: 5.23 B/s (using 1097 data points, chi2=5.08)
[2025-11-26 07:47:24] 2025-11-26 12:46:48,983 | INFO     | could have reported an average CPU frequency of 2600 MHz (41 samples)
[2025-11-26 07:47:24] 2025-11-26 12:46:48,984 | INFO     | ..............................
[2025-11-26 07:47:24] 2025-11-26 12:46:48,984 | INFO     | . Timing measurements:
[2025-11-26 07:47:24] 2025-11-26 12:46:48,984 | INFO     | . get job = 0 s
[2025-11-26 07:47:24] 2025-11-26 12:46:48,984 | INFO     | . initial setup = 5 s
[2025-11-26 07:47:24] 2025-11-26 12:46:48,984 | INFO     | . payload setup = 28 s
[2025-11-26 07:47:24] 2025-11-26 12:46:48,984 | INFO     | . stage-in = 0 s
[2025-11-26 07:47:24] 2025-11-26 12:46:48,985 | INFO     | . payload execution = 68494 s
[2025-11-26 07:47:24] 2025-11-26 12:46:48,985 | INFO     | . stage-out = 15 s
[2025-11-26 07:47:24] 2025-11-26 12:46:48,985 | INFO     | . log creation = 4 s
[2025-11-26 07:47:24] 2025-11-26 12:46:48,985 | INFO     | ..............................
[2025-11-26 07:47:24] 2025-11-26 12:46:49,353 | INFO     | 
[2025-11-26 07:47:24] 2025-11-26 12:46:49,353 | INFO     | job summary report
[2025-11-26 07:47:24] 2025-11-26 12:46:49,353 | INFO     | --------------------------------------------------
[2025-11-26 07:47:24] 2025-11-26 12:46:49,353 | INFO     | PanDA job id: 6895386554
[2025-11-26 07:47:24] 2025-11-26 12:46:49,353 | INFO     | task id: 47556149
[2025-11-26 07:47:24] 2025-11-26 12:46:49,353 | INFO     | errors: (none)
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | pilot state: finished 
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | transexitcode: 0
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | exeerrorcode: 0
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | exeerrordiag: 
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | exitcode: 0
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | exitmsg: OK
[2025-11-26 07:47:24] 2025-11-26 12:46:49,354 | INFO     | cpuconsumptiontime: 288208 s
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | nevents: 1000
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | neventsw: 0
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | pid: 3362719
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | pgrp: 3362719
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | corecount: 8
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | event service: False
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | sizes: {0: 2284037, 1: 2284121, 2: 2284320, 13: 2284320, 24: 2284666, 35: 2284666, 68527: 2341349, 68543: 2350371, 68546: 2350427, 68571: 2350769}
[2025-11-26 07:47:24] 2025-11-26 12:46:49,355 | INFO     | --------------------------------------------------
[2025-11-26 07:47:24] 2025-11-26 12:46:49,356 | INFO     | 
[2025-11-26 07:47:24] 2025-11-26 12:46:49,356 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 07:47:24] 2025-11-26 12:46:49,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:47:24] 2025-11-26 12:46:49,418 | INFO     | job 6895386554 has completed (purged errors)
[2025-11-26 07:47:24] 2025-11-26 12:46:49,418 | INFO     | overall cleanup function is called
[2025-11-26 07:47:24] 2025-11-26 12:46:50,456 | INFO     | --- collectZombieJob: --- 10, [3362719]
[2025-11-26 07:47:24] 2025-11-26 12:46:50,456 | INFO     | zombie collector waiting for pid 3362719
[2025-11-26 07:47:24] 2025-11-26 12:46:50,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:47:24] 2025-11-26 12:46:50,456 | INFO     | collected zombie processes
[2025-11-26 07:47:24] 2025-11-26 12:46:50,456 | INFO     | will attempt to kill all subprocesses of pid=3362719
[2025-11-26 07:47:24] 2025-11-26 12:46:51,670 | INFO     | process IDs to be killed: [3362719] (in reverse order)
[2025-11-26 07:47:24] 2025-11-26 12:46:52,082 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:47:24] 2025-11-26 12:46:52,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:47:24] 2025-11-26 12:46:52,142 | INFO     | did not find any defunct processes belonging to 3362719
[2025-11-26 07:47:24] 2025-11-26 12:46:52,221 | INFO     | did not find any defunct processes belonging to 3362719
[2025-11-26 07:47:24] 2025-11-26 12:46:52,241 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:47:24] 2025-11-26 12:46:52,241 | INFO     | ready for new job
[2025-11-26 07:47:24] 2025-11-26 12:46:52,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:47:24] 2025-11-26 12:46:52,255 | INFO     | ***************************************
[2025-11-26 07:47:24] 2025-11-26 12:46:52,255 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:47:24] 2025-11-26 12:46:52,255 | INFO     | ***************************************
[2025-11-26 07:47:24] 2025-11-26 12:46:52,256 | INFO     | 
[2025-11-26 07:47:24] 2025-11-26 12:46:52,258 | INFO     | architecture information:
[2025-11-26 07:47:24] 2025-11-26 12:46:52,263 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:47:24] 2025-11-26 12:46:52,331 | INFO     | cat /etc/os-release:
[2025-11-26 07:47:24] NAME="CentOS Linux"
[2025-11-26 07:47:24] VERSION="7 (Core)"
[2025-11-26 07:47:24] ID="centos"
[2025-11-26 07:47:24] ID_LIKE="rhel fedora"
[2025-11-26 07:47:24] VERSION_ID="7"
[2025-11-26 07:47:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:47:24] ANSI_COLOR="0;31"
[2025-11-26 07:47:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:47:24] HOME_URL="https://www.centos.org/"
[2025-11-26 07:47:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:47:24] 
[2025-11-26 07:47:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:47:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:47:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:47:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:47:24] 
[2025-11-26 07:47:24] 2025-11-26 12:46:52,332 | INFO     | ***************************************
[2025-11-26 07:47:24] 2025-11-26 12:46:52,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 07:47:24] 2025-11-26 12:46:52,986 | INFO     | sufficient remaining disk space (70121422848 B)
[2025-11-26 07:47:24] 2025-11-26 12:46:52,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:47:24] 2025-11-26 12:46:52,987 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:47:24] 2025-11-26 12:46:52,987 | INFO     | update_server=False
[2025-11-26 07:47:24] 2025-11-26 12:46:52,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:47:24] 2025-11-26 12:46:52,987 | INFO     | all data control threads have been joined
[2025-11-26 07:47:24] 2025-11-26 12:46:52,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:47:24] 2025-11-26 12:46:52,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:47:24] 2025-11-26 12:46:52,988 | INFO     | aborting loop
[2025-11-26 07:47:24] 2025-11-26 12:46:53,211 | INFO     | all payload control threads have been joined
[2025-11-26 07:47:24] 2025-11-26 12:46:53,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:47:24] 2025-11-26 12:46:53,993 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:53,993 | INFO     | [data] control thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:53,994 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,201 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:47:24] 2025-11-26 12:46:54,207 | INFO     | all job control threads have been joined
[2025-11-26 07:47:24] 2025-11-26 12:46:54,217 | INFO     | [payload] control thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,366 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,457 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,806 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,807 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,995 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:54,995 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:55,000 | INFO     | [job] validate thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:55,160 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:55,207 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:55,214 | INFO     | [job] control thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:46:57,502 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:47:24] 2025-11-26 12:47:06,747 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:47:24] 2025-11-26 12:47:07,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046641678144)>', '<ExcThread(monitor, started 140046300591872)>']
[2025-11-26 07:47:24] 2025-11-26 12:47:12,757 | INFO     | all workflow threads have been joined
[2025-11-26 07:47:24] 2025-11-26 12:47:12,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:47:24] 2025-11-26 12:47:12,757 | INFO     | traces error code: 0
[2025-11-26 07:47:24] 2025-11-26 12:47:12,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:47:24] 2025-11-26 12:47:23,026 | INFO     | PID=3346893 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:47:24] 2025-11-26 12:47:23,026 | INFO     | .. there are 44 such processes running
[2025-11-26 07:47:24] 2025-11-26 12:47:23,028 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:47:24] 2025-11-26 12:47:23,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:47:24] 2025-11-26 12:47:23,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:47:24] 2025-11-26 12:47:23,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:47:24] 2025-11-26 12:47:23,029 | INFO     | [monitor] control thread has ended
[2025-11-26 07:47:24] 2025-11-26 12:47:23,371 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:47:24] 2025-11-26 12:47:23,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:47:24] 2025-11-26 12:47:23,414 [wrapper] pilotpid: 3346893
[2025-11-26 07:47:24] 2025-11-26 12:47:23,431 [wrapper] Pilot exit status: 0
[2025-11-26 07:47:24] 2025-11-26 12:47:23,558 [wrapper] pandaids: 6895386554
[2025-11-26 07:47:24] 2025-11-26 12:47:23,833 [wrapper] cleanup supervisor_pilot 2856846 3346894
[2025-11-26 07:47:24] 2025-11-26 12:47:23,848 [wrapper] Test setup, not cleaning
[2025-11-26 07:47:24] 2025-11-26 12:47:23,875 [wrapper] apfmon messages muted
[2025-11-26 07:47:24] 2025-11-26 12:47:23,894 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:47:24] 2025-11-26 12:47:23,922 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:47:24]  *** Error codes and diagnostics ***
[2025-11-26 07:47:24]     "exeErrorCode": 0,
[2025-11-26 07:47:24]     "exeErrorDiag": "",
[2025-11-26 07:47:24]     "pilotErrorCode": 0,
[2025-11-26 07:47:24]     "pilotErrorDiag": "",
[2025-11-26 07:47:24]  *** Listing of results directory ***
[2025-11-26 07:47:24] total 1321588
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:25 queuedata.json
[2025-11-26 07:47:24] -rwx------. 1 boincer umatlas     36292 Nov 24 00:25 runpilot2-wrapper.sh
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas       100 Nov 25 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:47:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 12:42 run_atlas
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas       105 Nov 25 12:42 job.xml
[2025-11-26 07:47:24] -rw-r--r--. 2 boincer umatlas 411601483 Nov 25 12:42 EVNT.47483658._001246.pool.root.1
[2025-11-26 07:47:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:42 start_atlas.sh
[2025-11-26 07:47:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 12:42 shared
[2025-11-26 07:47:24] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 12:42 input.tar.gz
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas         0 Nov 25 12:42 boinc_lockfile
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 12:42 pandaJob.out
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas        57 Nov 25 12:42 setup.sh.local
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas    991543 Nov 25 12:43 agis_schedconf.cvmfs.json
[2025-11-26 07:47:24] drwx------. 5 boincer umatlas      4096 Nov 25 12:43 pilot3
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas       533 Nov 26 07:26 boinc_task_state.xml
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas 915872328 Nov 26 07:44 HITS.47556149._002325.pool.root.1
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas      1058 Nov 26 07:46 memory_monitor_summary.json
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas   1516240 Nov 26 07:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas   2237662 Nov 26 07:46 log.47556149._002325.job.log.tgz.1
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas      8612 Nov 26 07:46 heartbeat.json
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas      6660 Nov 26 07:46 init_data.xml
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas        95 Nov 26 07:47 pilot_heartbeat.json
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas       823 Nov 26 07:47 pilotlog.txt
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas   8722688 Nov 26 07:47 log.47556149._002325.job.log.1
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 07:47 boinc_mmap_file
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas        29 Nov 26 07:47 wrapper_checkpoint.txt
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas       353 Nov 26 07:47 output.list
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas       620 Nov 26 07:47 runtime_log
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas  10977280 Nov 26 07:47 result.tar.gz
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas       657 Nov 26 07:47 ZMNLDmAGeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4TLKDmJeRNNo.diag
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 07:47 runtime_log.err
[2025-11-26 07:47:24] -rw-r--r--. 1 boincer umatlas     21652 Nov 26 07:47 stderr.txt
[2025-11-26 07:47:24] HITS file was successfully produced:
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas 915872328 Nov 26 07:44 shared/HITS.pool.root.1
[2025-11-26 07:47:24]  *** Contents of shared directory: ***
[2025-11-26 07:47:24] total 1307684
[2025-11-26 07:47:24] -rw-r--r--. 2 boincer umatlas 411601483 Nov 25 12:42 ATLAS.root_0
[2025-11-26 07:47:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 12:42 start_atlas.sh
[2025-11-26 07:47:24] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 12:42 input.tar.gz
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas 915872328 Nov 26 07:44 HITS.pool.root.1
[2025-11-26 07:47:24] -rw-------. 1 boincer umatlas  10977280 Nov 26 07:47 result.tar.gz
07:47:26 (3341229): run_atlas exited; CPU time 290673.546747
07:47:26 (3341229): called boinc_finish(0)

</stderr_txt>
]]>

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