Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:03 (1484546): wrapper (7.7.26015): starting
00:04:03 (1484546): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:04:03] Arguments: --nthreads 9
[2025-11-25 00:04:03] Threads: 9
[2025-11-25 00:04:03] Checking for CVMFS
[2025-11-25 00:04:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:04:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:04:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:04:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:04:04] 2.13.3.0 11836 26686 339544 153270 0 227 31436177 32935937 39567 16776704 0 112257568 99.536 124836025 35717 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:04:04] CVMFS is ok
[2025-11-25 00:04:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:04:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:04:04] Further information can be found at the LHC@home message board.
[2025-11-25 00:04:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:04:04] Checking for apptainer binary...
[2025-11-25 00:04:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:04:04] Running /usr/bin/apptainer --version
[2025-11-25 00:04:04] apptainer version 1.4.4-1.el9
[2025-11-25 00:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:04:05] c6-2-11-1.aglt2.org
[2025-11-25 00:04:05] apptainer works
[2025-11-25 00:04:05] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:04:05] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:04:05] Starting ATLAS job with PandaID=6895386547
[2025-11-25 00:04:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:23:01]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:23:01] 2025-11-25 23:21:51,801 | INFO     | monitor loop #3600: job 0:6895386547 is in state 'finished'
[2025-11-25 18:23:01] 2025-11-25 23:21:51,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:23:01] 2025-11-25 23:21:52,890 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 18:23:01] 2025-11-25 23:21:52,903 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2655.654572916668
[2025-11-25 18:23:01] 2025-11-25 23:21:52,921 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6895386547/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:23:01] 2025-11-25 23:21:52,921 | INFO     | extracted standard info from prmon json
[2025-11-25 18:23:01] 2025-11-25 23:21:52,921 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:23:01] 2025-11-25 23:21:52,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:23:01] 2025-11-25 23:21:52,940 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:23:01] 2025-11-25 23:21:52,941 | INFO     | sum of square deviations: 387261933082.43823
[2025-11-25 18:23:01] 2025-11-25 23:21:52,964 | INFO     | sum of deviations: 2593383179906.795
[2025-11-25 18:23:01] 2025-11-25 23:21:52,965 | INFO     | mean x: 1764080029.1940575
[2025-11-25 18:23:01] 2025-11-25 23:21:52,973 | INFO     | mean y: 2996288.4986072425
[2025-11-25 18:23:01] 2025-11-25 23:21:52,974 | INFO     | intersect: -11810546652.081274
[2025-11-25 18:23:01] 2025-11-25 23:21:52,975 | INFO     | chi2: 8.471889300578976
[2025-11-25 18:23:01] 2025-11-25 23:21:52,990 | INFO     | sum of square deviations: 381894777342.2897
[2025-11-25 18:23:01] 2025-11-25 23:21:53,000 | INFO     | time since job start (65817s) is within the limit (172800.0s)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,030 | INFO     | sum of deviations: 2922231493008.5947
[2025-11-25 18:23:01] 2025-11-25 23:21:53,031 | INFO     | mean x: 1764079876.7360075
[2025-11-25 18:23:01] 2025-11-25 23:21:53,031 | INFO     | mean y: 3005626.489738806
[2025-11-25 18:23:01] 2025-11-25 23:21:53,031 | INFO     | intersect: -13495607284.2604
[2025-11-25 18:23:01] 2025-11-25 23:21:53,032 | INFO     | chi2: 5.99331640693277
[2025-11-25 18:23:01] 2025-11-25 23:21:53,032 | INFO     | current chi2=5.99331640693277 (change=29.2564362647753 %)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,034 | INFO     | sum of square deviations: 376577548128.7722
[2025-11-25 18:23:01] 2025-11-25 23:21:53,056 | INFO     | sum of deviations: 3081270214418.3276
[2025-11-25 18:23:01] 2025-11-25 23:21:53,056 | INFO     | mean x: 1764079724.2792878
[2025-11-25 18:23:01] 2025-11-25 23:21:53,057 | INFO     | mean y: 3010184.277413308
[2025-11-25 18:23:01] 2025-11-25 23:21:53,057 | INFO     | intersect: -14431218136.796944
[2025-11-25 18:23:01] 2025-11-25 23:21:53,058 | INFO     | chi2: 5.280782538952443
[2025-11-25 18:23:01] 2025-11-25 23:21:53,058 | INFO     | current chi2=5.280782538952443 (change=11.88880779189471 %)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,058 | INFO     | right removable region: 1066
[2025-11-25 18:23:01] 2025-11-25 23:21:53,059 | INFO     | sum of square deviations: 381888802557.81757
[2025-11-25 18:23:01] 2025-11-25 23:21:53,082 | INFO     | sum of deviations: 2174893597237.374
[2025-11-25 18:23:01] 2025-11-25 23:21:53,082 | INFO     | mean x: 1764080181.7369404
[2025-11-25 18:23:01] 2025-11-25 23:21:53,082 | INFO     | mean y: 3008166.9197761193
[2025-11-25 18:23:01] 2025-11-25 23:21:53,083 | INFO     | intersect: -10043598768.333698
[2025-11-25 18:23:01] 2025-11-25 23:21:53,084 | INFO     | chi2: 4.873885491405792
[2025-11-25 18:23:01] 2025-11-25 23:21:53,084 | INFO     | current chi2=4.873885491405792 (change=42.46991056560776 %)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,085 | INFO     | sum of square deviations: 376565598594.77155
[2025-11-25 18:23:01] 2025-11-25 23:21:53,109 | INFO     | sum of deviations: 1930102241728.071
[2025-11-25 18:23:01] 2025-11-25 23:21:53,109 | INFO     | mean x: 1764080334.2792878
[2025-11-25 18:23:01] 2025-11-25 23:21:53,109 | INFO     | mean y: 3015177.197750703
[2025-11-25 18:23:01] 2025-11-25 23:21:53,109 | INFO     | intersect: -9038850092.72267
[2025-11-25 18:23:01] 2025-11-25 23:21:53,110 | INFO     | chi2: 3.6963155596272226
[2025-11-25 18:23:01] 2025-11-25 23:21:53,111 | INFO     | current chi2=3.6963155596272226 (change=24.16080422601227 %)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,111 | INFO     | left removable region: 20
[2025-11-25 18:23:01] 2025-11-25 23:21:53,112 | INFO     | sum of square deviations: 354763687565.42786
[2025-11-25 18:23:01] 2025-11-25 23:21:53,141 | INFO     | sum of deviations: 2228284656552.466
[2025-11-25 18:23:01] 2025-11-25 23:21:53,141 | INFO     | mean x: 1764080303.914914
[2025-11-25 18:23:01] 2025-11-25 23:21:53,141 | INFO     | mean y: 3035437.1175908223
[2025-11-25 18:23:01] 2025-11-25 23:21:53,141 | INFO     | intersect: -11077222244.032644
[2025-11-25 18:23:01] 2025-11-25 23:21:53,143 | INFO     | chi2: 0.24453673459700082
[2025-11-25 18:23:01] 2025-11-25 23:21:53,143 | INFO     | current memory leak: 6.28 B/s (using 1046 data points, chi2=0.24)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,144 | INFO     | could have reported an average CPU frequency of 2662 MHz (39 samples)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | ..............................
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . Timing measurements:
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . get job = 0 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . initial setup = 4 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . payload setup = 37 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . stage-in = 0 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . payload execution = 65711 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . stage-out = 5 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | . log creation = 1 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,145 | INFO     | ..............................
[2025-11-25 18:23:01] 2025-11-25 23:21:53,300 | INFO     | 
[2025-11-25 18:23:01] 2025-11-25 23:21:53,300 | INFO     | job summary report
[2025-11-25 18:23:01] 2025-11-25 23:21:53,300 | INFO     | --------------------------------------------------
[2025-11-25 18:23:01] 2025-11-25 23:21:53,300 | INFO     | PanDA job id: 6895386547
[2025-11-25 18:23:01] 2025-11-25 23:21:53,300 | INFO     | task id: 47556149
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | errors: (none)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | pilot state: finished 
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | transexitcode: 0
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | exeerrorcode: 0
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | exeerrordiag: 
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | exitcode: 0
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | exitmsg: OK
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | cpuconsumptiontime: 257004 s
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | nevents: 1000
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | neventsw: 0
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | pid: 1539144
[2025-11-25 18:23:01] 2025-11-25 23:21:53,301 | INFO     | pgrp: 1539144
[2025-11-25 18:23:01] 2025-11-25 23:21:53,302 | INFO     | corecount: 9
[2025-11-25 18:23:01] 2025-11-25 23:21:53,302 | INFO     | event service: False
[2025-11-25 18:23:01] 2025-11-25 23:21:53,302 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 21: 2284628, 23: 2284656, 65753: 2339167, 65760: 2348166, 65762: 2348222, 65774: 2348468}
[2025-11-25 18:23:01] 2025-11-25 23:21:53,302 | INFO     | --------------------------------------------------
[2025-11-25 18:23:01] 2025-11-25 23:21:53,302 | INFO     | 
[2025-11-25 18:23:01] 2025-11-25 23:21:53,302 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-25 18:23:01] 2025-11-25 23:21:53,323 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,326 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,326 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,328 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:23:01] 2025-11-25 23:21:53,328 | INFO     | job 6895386547 has completed (purged errors)
[2025-11-25 18:23:01] 2025-11-25 23:21:53,328 | INFO     | overall cleanup function is called
[2025-11-25 18:23:01] 2025-11-25 23:21:54,361 | INFO     | --- collectZombieJob: --- 10, [1539144]
[2025-11-25 18:23:01] 2025-11-25 23:21:54,362 | INFO     | zombie collector waiting for pid 1539144
[2025-11-25 18:23:01] 2025-11-25 23:21:54,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:23:01] 2025-11-25 23:21:54,362 | INFO     | collected zombie processes
[2025-11-25 18:23:01] 2025-11-25 23:21:54,362 | INFO     | will attempt to kill all subprocesses of pid=1539144
[2025-11-25 18:23:01] 2025-11-25 23:21:55,152 | INFO     | process IDs to be killed: [1539144] (in reverse order)
[2025-11-25 18:23:01] 2025-11-25 23:21:55,337 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:23:01] 2025-11-25 23:21:55,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:23:01] 2025-11-25 23:21:55,362 | INFO     | did not find any defunct processes belonging to 1539144
[2025-11-25 18:23:01] 2025-11-25 23:21:55,388 | INFO     | did not find any defunct processes belonging to 1539144
[2025-11-25 18:23:01] 2025-11-25 23:21:55,389 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:23:01] 2025-11-25 23:21:55,389 | INFO     | ready for new job
[2025-11-25 18:23:01] 2025-11-25 23:21:55,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:23:01] 2025-11-25 23:21:55,394 | INFO     | ***************************************
[2025-11-25 18:23:01] 2025-11-25 23:21:55,394 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:23:01] 2025-11-25 23:21:55,395 | INFO     | ***************************************
[2025-11-25 18:23:01] 2025-11-25 23:21:55,395 | INFO     | 
[2025-11-25 18:23:01] 2025-11-25 23:21:55,400 | INFO     | architecture information:
[2025-11-25 18:23:01] 2025-11-25 23:21:55,401 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:23:01] 2025-11-25 23:21:55,419 | INFO     | cat /etc/os-release:
[2025-11-25 18:23:01] NAME="CentOS Linux"
[2025-11-25 18:23:01] VERSION="7 (Core)"
[2025-11-25 18:23:01] ID="centos"
[2025-11-25 18:23:01] ID_LIKE="rhel fedora"
[2025-11-25 18:23:01] VERSION_ID="7"
[2025-11-25 18:23:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:23:01] ANSI_COLOR="0;31"
[2025-11-25 18:23:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:23:01] HOME_URL="https://www.centos.org/"
[2025-11-25 18:23:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:23:01] 
[2025-11-25 18:23:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:23:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:23:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:23:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:23:01] 
[2025-11-25 18:23:01] 2025-11-25 23:21:55,419 | INFO     | ***************************************
[2025-11-25 18:23:01] 2025-11-25 23:21:55,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-25 18:23:01] 2025-11-25 23:21:56,004 | INFO     | sufficient remaining disk space (86936387584 B)
[2025-11-25 18:23:01] 2025-11-25 23:21:56,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:23:01] 2025-11-25 23:21:56,005 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:23:01] 2025-11-25 23:21:56,005 | INFO     | update_server=False
[2025-11-25 18:23:01] 2025-11-25 23:21:56,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:23:01] 2025-11-25 23:21:56,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:23:01] 2025-11-25 23:21:56,007 | INFO     | aborting loop
[2025-11-25 18:23:01] 2025-11-25 23:21:56,274 | INFO     | all data control threads have been joined
[2025-11-25 18:23:01] 2025-11-25 23:21:56,391 | INFO     | all job control threads have been joined
[2025-11-25 18:23:01] 2025-11-25 23:21:56,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:23:01] 2025-11-25 23:21:57,019 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:57,020 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:57,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:23:01] 2025-11-25 23:21:57,075 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:57,254 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:57,280 | INFO     | [data] control thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:57,397 | INFO     | [job] control thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:57,405 | INFO     | all payload control threads have been joined
[2025-11-25 18:23:01] 2025-11-25 23:21:57,550 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:58,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:58,178 | INFO     | [job] validate thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:58,297 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:58,298 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:58,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:23:01] 2025-11-25 23:21:58,340 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:58,415 | INFO     | [payload] control thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:59,072 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:21:59,329 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:22:00,546 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:23:01] 2025-11-25 23:22:26,874 | INFO     | PID=1503136 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 18:23:01] 2025-11-25 23:22:26,874 | INFO     | .. there are 54 such processes running
[2025-11-25 18:23:01] 2025-11-25 23:22:26,875 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:23:01] 2025-11-25 23:22:26,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:23:01] 2025-11-25 23:22:26,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:23:01] 2025-11-25 23:22:55,908 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:23:01] 2025-11-25 23:22:56,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452186801984)>', '<ExcThread(monitor, started 140451394873088)>']
[2025-11-25 18:23:01] 2025-11-25 23:22:57,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:23:01] 2025-11-25 23:22:57,085 | INFO     | [monitor] control thread has ended
[2025-11-25 18:23:01] 2025-11-25 23:23:01,247 | INFO     | all workflow threads have been joined
[2025-11-25 18:23:01] 2025-11-25 23:23:01,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:23:01] 2025-11-25 23:23:01,247 | INFO     | traces error code: 0
[2025-11-25 18:23:01] 2025-11-25 23:23:01,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:23:01] 2025-11-25 23:23:01,449 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:23:01] 2025-11-25 23:23:01,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:23:01] 2025-11-25 23:23:01,455 [wrapper] pilotpid: 1503136
[2025-11-25 18:23:01] 2025-11-25 23:23:01,458 [wrapper] Pilot exit status: 0
[2025-11-25 18:23:01] 2025-11-25 23:23:01,475 [wrapper] pandaids: 6895386547
[2025-11-25 18:23:01] 2025-11-25 23:23:01,605 [wrapper] cleanup supervisor_pilot 2040475 1503137
[2025-11-25 18:23:01] 2025-11-25 23:23:01,608 [wrapper] Test setup, not cleaning
[2025-11-25 18:23:01] 2025-11-25 23:23:01,611 [wrapper] apfmon messages muted
[2025-11-25 18:23:01] 2025-11-25 23:23:01,613 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:23:01] 2025-11-25 23:23:01,616 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:23:01]  *** Error codes and diagnostics ***
[2025-11-25 18:23:01]     "exeErrorCode": 0,
[2025-11-25 18:23:01]     "exeErrorDiag": "",
[2025-11-25 18:23:01]     "pilotErrorCode": 0,
[2025-11-25 18:23:01]     "pilotErrorDiag": "",
[2025-11-25 18:23:01]  *** Listing of results directory ***
[2025-11-25 18:23:01] total 1314220
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:25 queuedata.json
[2025-11-25 18:23:01] -rwx------. 1 boincer umatlas     36292 Nov 24 00:25 runpilot2-wrapper.sh
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:23:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:04 run_atlas
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:04 job.xml
[2025-11-25 18:23:01] -rw-r--r--. 2 boincer umatlas 408053102 Nov 25 00:04 EVNT.47483658._001245.pool.root.1
[2025-11-25 18:23:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 18:23:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:04 shared
[2025-11-25 18:23:01] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 00:04 input.tar.gz
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:04 boinc_lockfile
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:04 pandaJob.out
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas        57 Nov 25 00:04 setup.sh.local
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 18:23:01] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas       533 Nov 25 18:09 boinc_task_state.xml
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas 913469795 Nov 25 18:20 HITS.47556149._002318.pool.root.1
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas      1059 Nov 25 18:21 memory_monitor_summary.json
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas   1516240 Nov 25 18:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas   2280478 Nov 25 18:21 log.47556149._002318.job.log.tgz.1
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas      8619 Nov 25 18:21 heartbeat.json
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas        95 Nov 25 18:22 pilot_heartbeat.json
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas      6878 Nov 25 18:22 init_data.xml
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 18:23 boinc_mmap_file
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas        29 Nov 25 18:23 wrapper_checkpoint.txt
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas      4824 Nov 25 18:23 pilotlog.txt
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas   7873262 Nov 25 18:23 log.47556149._002318.job.log.1
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas       353 Nov 25 18:23 output.list
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas       620 Nov 25 18:23 runtime_log
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas  10178560 Nov 25 18:23 result.tar.gz
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 18:23 runtime_log.err
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas       661 Nov 25 18:23 IBGLDmAGeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyTLKDmWCcJMo.diag
[2025-11-25 18:23:01] -rw-r--r--. 1 boincer umatlas     21355 Nov 25 18:23 stderr.txt
[2025-11-25 18:23:01] HITS file was successfully produced:
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas 913469795 Nov 25 18:20 shared/HITS.pool.root.1
[2025-11-25 18:23:01]  *** Contents of shared directory: ***
[2025-11-25 18:23:01] total 1301100
[2025-11-25 18:23:01] -rw-r--r--. 2 boincer umatlas 408053102 Nov 25 00:04 ATLAS.root_0
[2025-11-25 18:23:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 18:23:01] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 00:04 input.tar.gz
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas 913469795 Nov 25 18:20 HITS.pool.root.1
[2025-11-25 18:23:01] -rw-------. 1 boincer umatlas  10178560 Nov 25 18:23 result.tar.gz
18:23:02 (1484546): run_atlas exited; CPU time 259903.233114
18:23:02 (1484546): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN