Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:50:47 (107362): wrapper (7.7.26015): starting
18:50:47 (107362): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 18:50:47] Arguments: --nthreads 3
[2025-11-27 18:50:47] Threads: 3
[2025-11-27 18:50:47] Checking for CVMFS
[2025-11-27 18:50:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 18:50:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 18:50:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 18:50:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 18:50:48] 2.9.2.0 2549270 13067 94792 153377 3 81 29696173 36864000 0 130560 0 4841115 99.881 742767 6237 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 18:50:48] CVMFS is ok
[2025-11-27 18:50:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 18:50:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 18:50:48] Further information can be found at the LHC@home message board.
[2025-11-27 18:50:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 18:50:48] Checking for apptainer binary...
[2025-11-27 18:50:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 18:50:48] Running /usr/bin/apptainer --version
[2025-11-27 18:50:48] apptainer version 1.4.1-1.1
[2025-11-27 18:50:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 18:50:48] atlasA214
[2025-11-27 18:50:48] apptainer works
[2025-11-27 18:50:48] Set ATHENA_PROC_NUMBER=3
[2025-11-27 18:50:48] Set ATHENA_CORE_NUMBER=3
[2025-11-27 18:50:48] Starting ATLAS job with PandaID=6895366346
[2025-11-27 18:50:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 03:10:33]  *** The last 200 lines of the pilot log: ***
[2025-11-28 03:10:33] 2025-11-28 02:09:40,503 | INFO     | number of running child processes to parent process 117531: 1
[2025-11-28 03:10:33] 2025-11-28 02:09:40,503 | INFO     | maximum number of monitored processes: 8
[2025-11-28 03:10:33] 2025-11-28 02:09:40,618 | INFO     | time since job start (29926s) is within the limit (172800.0s)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,654 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 03:10:33] 2025-11-28 02:09:41,655 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3448.476
[2025-11-28 03:10:33] 2025-11-28 02:09:41,656 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895366346/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,656 | INFO     | extracted standard info from prmon json
[2025-11-28 03:10:33] 2025-11-28 02:09:41,656 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 03:10:33] 2025-11-28 02:09:41,656 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 03:10:33] 2025-11-28 02:09:41,659 | INFO     | fitting pss+swap vs Time
[2025-11-28 03:10:33] 2025-11-28 02:09:41,659 | INFO     | sum of square deviations: 36704650990.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,661 | INFO     | sum of deviations: 203166267733.00003
[2025-11-28 03:10:33] 2025-11-28 02:09:41,661 | INFO     | mean x: 1764280818.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,661 | INFO     | mean y: 2199708.2749490836
[2025-11-28 03:10:33] 2025-11-28 02:09:41,661 | INFO     | intersect: -9763384198.888208
[2025-11-28 03:10:33] 2025-11-28 02:09:41,661 | INFO     | chi2: 4.31083708928038
[2025-11-28 03:10:33] 2025-11-28 02:09:41,661 | INFO     | sum of square deviations: 35594704597.5
[2025-11-28 03:10:33] 2025-11-28 02:09:41,663 | INFO     | sum of deviations: 286532649153.5
[2025-11-28 03:10:33] 2025-11-28 02:09:41,663 | INFO     | mean x: 1764280665.5
[2025-11-28 03:10:33] 2025-11-28 02:09:41,663 | INFO     | mean y: 2211123.3353909464
[2025-11-28 03:10:33] 2025-11-28 02:09:41,663 | INFO     | intersect: -14200014141.698008
[2025-11-28 03:10:33] 2025-11-28 02:09:41,663 | INFO     | chi2: 2.3948158969315223
[2025-11-28 03:10:33] 2025-11-28 02:09:41,663 | INFO     | current chi2=2.3948158969315223 (change=44.44661564950728 %)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,664 | INFO     | sum of square deviations: 34507363280.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,665 | INFO     | sum of deviations: 280512496719.99994
[2025-11-28 03:10:33] 2025-11-28 02:09:41,665 | INFO     | mean x: 1764280513.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,666 | INFO     | mean y: 2210278.9937629937
[2025-11-28 03:10:33] 2025-11-28 02:09:41,666 | INFO     | intersect: -14339735455.901352
[2025-11-28 03:10:33] 2025-11-28 02:09:41,666 | INFO     | chi2: 2.394720212138408
[2025-11-28 03:10:33] 2025-11-28 02:09:41,666 | INFO     | current chi2=2.394720212138408 (change=0.003995496824485387 %)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,666 | INFO     | right removable region: 480
[2025-11-28 03:10:33] 2025-11-28 02:09:41,666 | INFO     | sum of square deviations: 35594704597.5
[2025-11-28 03:10:33] 2025-11-28 02:09:41,668 | INFO     | sum of deviations: 99854914654.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,668 | INFO     | mean x: 1764280970.5
[2025-11-28 03:10:33] 2025-11-28 02:09:41,668 | INFO     | mean y: 2213884.670781893
[2025-11-28 03:10:33] 2025-11-28 02:09:41,668 | INFO     | intersect: -4947177541.022558
[2025-11-28 03:10:33] 2025-11-28 02:09:41,668 | INFO     | chi2: 2.212274579786799
[2025-11-28 03:10:33] 2025-11-28 02:09:41,668 | INFO     | current chi2=2.212274579786799 (change=48.68109061026706 %)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,668 | INFO     | sum of square deviations: 34507363280.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,670 | INFO     | sum of deviations: 74152076227.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,670 | INFO     | mean x: 1764281123.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,670 | INFO     | mean y: 2217474.1787941786
[2025-11-28 03:10:33] 2025-11-28 02:09:41,670 | INFO     | intersect: -3789005496.322044
[2025-11-28 03:10:33] 2025-11-28 02:09:41,670 | INFO     | chi2: 2.00952013360288
[2025-11-28 03:10:33] 2025-11-28 02:09:41,670 | INFO     | current chi2=2.00952013360288 (change=9.164976537562469 %)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,670 | INFO     | left removable region: 20
[2025-11-28 03:10:33] 2025-11-28 02:09:41,671 | INFO     | sum of square deviations: 30182128695.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,672 | INFO     | sum of deviations: 133790257022.0
[2025-11-28 03:10:33] 2025-11-28 02:09:41,672 | INFO     | mean x: 1764281092.5
[2025-11-28 03:10:33] 2025-11-28 02:09:41,672 | INFO     | mean y: 2231215.065217391
[2025-11-28 03:10:33] 2025-11-28 02:09:41,672 | INFO     | intersect: -7818410702.207277
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | chi2: 0.06499742595650018
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | current memory leak: 4.43 B/s (using 460 data points, chi2=0.06)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | could have reported an average CPU frequency of 3850 MHz (20 samples)
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | ..............................
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . Timing measurements:
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . get job = 0 s
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . initial setup = 1 s
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . payload setup = 2 s
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . stage-in = 0 s
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . payload execution = 29903 s
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . stage-out = 1 s
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | . log creation = 0 s
[2025-11-28 03:10:33] 2025-11-28 02:09:41,673 | INFO     | ..............................
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | 
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | job summary report
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | --------------------------------------------------
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | PanDA job id: 6895366346
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | task id: 47556137
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | errors: (none)
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | pilot state: finished 
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | transexitcode: 0
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | exeerrorcode: 0
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | exeerrordiag: 
[2025-11-28 03:10:33] 2025-11-28 02:09:42,159 | INFO     | exitcode: 0
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | exitmsg: OK
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | cpuconsumptiontime: 88273 s
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | nevents: 1000
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | neventsw: 0
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | pid: 117531
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | pgrp: 117531
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | corecount: 3
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | event service: False
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | sizes: {0: 2284261, 2: 2284523, 11: 2284551, 29909: 2323875, 29911: 2332931, 29914: 2333121}
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | --------------------------------------------------
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | 
[2025-11-28 03:10:33] 2025-11-28 02:09:42,160 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-28 03:10:33] 2025-11-28 02:09:42,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | job 6895366346 has completed (purged errors)
[2025-11-28 03:10:33] 2025-11-28 02:09:42,175 | INFO     | overall cleanup function is called
[2025-11-28 03:10:33] 2025-11-28 02:09:43,184 | INFO     | --- collectZombieJob: --- 10, [117531]
[2025-11-28 03:10:33] 2025-11-28 02:09:43,184 | INFO     | zombie collector waiting for pid 117531
[2025-11-28 03:10:33] 2025-11-28 02:09:43,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 03:10:33] 2025-11-28 02:09:43,184 | INFO     | collected zombie processes
[2025-11-28 03:10:33] 2025-11-28 02:09:43,184 | INFO     | will attempt to kill all subprocesses of pid=117531
[2025-11-28 03:10:33] 2025-11-28 02:09:43,225 | INFO     | process IDs to be killed: [117531] (in reverse order)
[2025-11-28 03:10:33] 2025-11-28 02:09:43,249 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 03:10:33] 2025-11-28 02:09:43,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 03:10:33] 2025-11-28 02:09:43,250 | INFO     | did not find any defunct processes belonging to 117531
[2025-11-28 03:10:33] 2025-11-28 02:09:43,251 | INFO     | did not find any defunct processes belonging to 117531
[2025-11-28 03:10:33] 2025-11-28 02:09:43,251 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 03:10:33] 2025-11-28 02:09:43,251 | INFO     | ready for new job
[2025-11-28 03:10:33] 2025-11-28 02:09:43,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 03:10:33] 2025-11-28 02:09:43,253 | INFO     | ***************************************
[2025-11-28 03:10:33] 2025-11-28 02:09:43,253 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 03:10:33] 2025-11-28 02:09:43,253 | INFO     | ***************************************
[2025-11-28 03:10:33] 2025-11-28 02:09:43,253 | INFO     | 
[2025-11-28 03:10:33] 2025-11-28 02:09:43,253 | INFO     | architecture information:
[2025-11-28 03:10:33] 2025-11-28 02:09:43,253 | INFO     | executing command: cat /etc/os-release
[2025-11-28 03:10:33] 2025-11-28 02:09:43,262 | INFO     | cat /etc/os-release:
[2025-11-28 03:10:33] NAME="CentOS Linux"
[2025-11-28 03:10:33] VERSION="7 (Core)"
[2025-11-28 03:10:33] ID="centos"
[2025-11-28 03:10:33] ID_LIKE="rhel fedora"
[2025-11-28 03:10:33] VERSION_ID="7"
[2025-11-28 03:10:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 03:10:33] ANSI_COLOR="0;31"
[2025-11-28 03:10:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 03:10:33] HOME_URL="https://www.centos.org/"
[2025-11-28 03:10:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 03:10:33] 
[2025-11-28 03:10:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 03:10:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 03:10:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 03:10:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 03:10:33] 
[2025-11-28 03:10:33] 2025-11-28 02:09:43,262 | INFO     | ***************************************
[2025-11-28 03:10:33] 2025-11-28 02:09:43,765 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 03:10:33] 2025-11-28 02:09:43,777 | INFO     | sufficient remaining disk space (227088007168 B)
[2025-11-28 03:10:33] 2025-11-28 02:09:43,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 03:10:33] 2025-11-28 02:09:43,777 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 03:10:33] 2025-11-28 02:09:43,777 | INFO     | update_server=False
[2025-11-28 03:10:33] 2025-11-28 02:09:43,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 03:10:33] 2025-11-28 02:09:43,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 03:10:33] 2025-11-28 02:09:43,985 | INFO     | all payload control threads have been joined
[2025-11-28 03:10:33] 2025-11-28 02:09:44,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:10:33] 2025-11-28 02:09:44,011 | INFO     | aborting loop
[2025-11-28 03:10:33] 2025-11-28 02:09:44,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 03:10:33] 2025-11-28 02:09:44,285 | INFO     | all job control threads have been joined
[2025-11-28 03:10:33] 2025-11-28 02:09:44,437 | INFO     | all data control threads have been joined
[2025-11-28 03:10:33] 2025-11-28 02:09:44,783 | INFO     | [job] retrieve thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:44,991 | INFO     | [payload] control thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,014 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,017 | INFO     | [job] job monitor thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,087 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,291 | INFO     | [job] control thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,442 | INFO     | [data] control thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,544 | INFO     | [payload] validate_post thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,651 | INFO     | [payload] failed_post thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,783 | INFO     | [data] copytool_out thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:45,857 | INFO     | [data] copytool_in thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:46,168 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:46,248 | INFO     | [job] validate thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:46,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:10:33] 2025-11-28 02:09:47,719 | INFO     | [job] queue monitor thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:48,038 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:09:54,298 | INFO     | job.realtimelogging is not enabled
[2025-11-28 03:10:33] 2025-11-28 02:09:55,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 03:10:33] 2025-11-28 02:10:13,709 | INFO     | PID=111081 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-28 03:10:33] 2025-11-28 02:10:13,709 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 03:10:33] 2025-11-28 02:10:13,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 03:10:33] 2025-11-28 02:10:13,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 03:10:33] 2025-11-28 02:10:28,524 | INFO     | [monitor] cgroup control has ended
[2025-11-28 03:10:33] 2025-11-28 02:10:28,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338493937472)>', '<ExcThread(monitor, started 140337771173632)>']
[2025-11-28 03:10:33] 2025-11-28 02:10:28,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 03:10:33] 2025-11-28 02:10:28,789 | INFO     | [monitor] control thread has ended
[2025-11-28 03:10:33] 2025-11-28 02:10:33,685 | INFO     | all workflow threads have been joined
[2025-11-28 03:10:33] 2025-11-28 02:10:33,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 03:10:33] 2025-11-28 02:10:33,686 | INFO     | traces error code: 0
[2025-11-28 03:10:33] 2025-11-28 02:10:33,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 03:10:33] 2025-11-28 02:10:33,735 [wrapper] ==== pilot stdout END ====
[2025-11-28 03:10:33] 2025-11-28 02:10:33,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 03:10:33] 2025-11-28 02:10:33,740 [wrapper] pilotpid: 111081
[2025-11-28 03:10:33] 2025-11-28 02:10:33,742 [wrapper] Pilot exit status: 0
[2025-11-28 03:10:33] 2025-11-28 02:10:33,749 [wrapper] pandaids: 6895366346
[2025-11-28 03:10:33] 2025-11-28 02:10:33,765 [wrapper] cleanup supervisor_pilot  172147 111082
[2025-11-28 03:10:33] 2025-11-28 02:10:33,768 [wrapper] Test setup, not cleaning
[2025-11-28 03:10:33] 2025-11-28 02:10:33,770 [wrapper] apfmon messages muted
[2025-11-28 03:10:33] 2025-11-28 02:10:33,772 [wrapper] ==== wrapper stdout END ====
[2025-11-28 03:10:33] 2025-11-28 02:10:33,774 [wrapper] ==== wrapper stderr END ====
[2025-11-28 03:10:33]  *** Error codes and diagnostics ***
[2025-11-28 03:10:33]     "exeErrorCode": 0,
[2025-11-28 03:10:33]     "exeErrorDiag": "",
[2025-11-28 03:10:33]     "pilotErrorCode": 0,
[2025-11-28 03:10:33]     "pilotErrorDiag": "",
[2025-11-28 03:10:33]  *** Listing of results directory ***
[2025-11-28 03:10:33] total 1316932
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc      5112 Nov 23 19:22 queuedata.json
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc    576529 Nov 23 19:24 pilot3.tar.gz
[2025-11-28 03:10:33] -rwx------ 1 boinc boinc     36292 Nov 23 19:24 runpilot2-wrapper.sh
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc       100 Nov 27 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 03:10:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 18:50 run_atlas
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc       105 Nov 27 18:50 job.xml
[2025-11-28 03:10:33] -rw-r--r-- 2 boinc boinc 408668066 Nov 27 18:50 EVNT.47483658._000841.pool.root.1
[2025-11-28 03:10:33] -rw-r--r-- 2 boinc boinc    590106 Nov 27 18:50 input.tar.gz
[2025-11-28 03:10:33] -rw-r--r-- 2 boinc boinc     15847 Nov 27 18:50 start_atlas.sh
[2025-11-28 03:10:33] drwxrwx--x 2 boinc boinc      4096 Nov 27 18:50 shared
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc         0 Nov 27 18:50 boinc_setup_complete
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc      6443 Nov 27 18:50 init_data.xml
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc         0 Nov 27 18:50 boinc_lockfile
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc      2782 Nov 27 18:50 pandaJob.out
[2025-11-28 03:10:33] -rw------- 1 boinc boinc    991231 Nov 27 18:50 agis_schedconf.cvmfs.json
[2025-11-28 03:10:33] drwx------ 5 boinc boinc      4096 Nov 27 18:50 pilot3
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc       532 Nov 28 03:04 boinc_task_state.xml
[2025-11-28 03:10:33] -rw------- 1 boinc boinc 925181645 Nov 28 03:09 HITS.47556137._008271.pool.root.1
[2025-11-28 03:10:33] -rw------- 1 boinc boinc        95 Nov 28 03:09 pilot_heartbeat.json
[2025-11-28 03:10:33] -rw------- 1 boinc boinc      1028 Nov 28 03:09 memory_monitor_summary.json
[2025-11-28 03:10:33] -rw------- 1 boinc boinc   1516240 Nov 28 03:09 agis_ddmendpoints.agis.ALL.json
[2025-11-28 03:10:33] -rw------- 1 boinc boinc   1176263 Nov 28 03:09 log.47556137._008271.job.log.tgz.1
[2025-11-28 03:10:33] -rw------- 1 boinc boinc      8581 Nov 28 03:09 heartbeat.json
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc      8192 Nov 28 03:10 boinc_mmap_file
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc        28 Nov 28 03:10 wrapper_checkpoint.txt
[2025-11-28 03:10:33] -rw------- 1 boinc boinc      4823 Nov 28 03:10 pilotlog.txt
[2025-11-28 03:10:33] -rw------- 1 boinc boinc   4208067 Nov 28 03:10 log.47556137._008271.job.log.1
[2025-11-28 03:10:33] -rw------- 1 boinc boinc       353 Nov 28 03:10 output.list
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc       620 Nov 28 03:10 runtime_log
[2025-11-28 03:10:33] -rw------- 1 boinc boinc   5406720 Nov 28 03:10 result.tar.gz
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc      8913 Nov 28 03:10 runtime_log.err
[2025-11-28 03:10:33] -rw------- 1 boinc boinc       668 Nov 28 03:10 RmONDmjwTh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5fIKDmr91yEo.diag
[2025-11-28 03:10:33] -rw-r--r-- 1 boinc boinc     21151 Nov 28 03:10 stderr.txt
[2025-11-28 03:10:33] HITS file was successfully produced:
[2025-11-28 03:10:33] -rw------- 1 boinc boinc 925181645 Nov 28 03:09 shared/HITS.pool.root.1
[2025-11-28 03:10:33]  *** Contents of shared directory: ***
[2025-11-28 03:10:33] total 1308476
[2025-11-28 03:10:33] -rw-r--r-- 2 boinc boinc 408668066 Nov 27 18:50 ATLAS.root_0
[2025-11-28 03:10:33] -rw-r--r-- 2 boinc boinc    590106 Nov 27 18:50 input.tar.gz
[2025-11-28 03:10:33] -rw-r--r-- 2 boinc boinc     15847 Nov 27 18:50 start_atlas.sh
[2025-11-28 03:10:33] -rw------- 1 boinc boinc 925181645 Nov 28 03:09 HITS.pool.root.1
[2025-11-28 03:10:33] -rw------- 1 boinc boinc   5406720 Nov 28 03:10 result.tar.gz
03:10:34 (107362): run_atlas exited; CPU time 88283.174443
03:10:34 (107362): called boinc_finish(0)

</stderr_txt>
]]>

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