Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:13 (2454156): wrapper (7.7.26015): starting
00:00:13 (2454156): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:00:13] Arguments: --nthreads 9
[2025-11-26 00:00:13] Threads: 9
[2025-11-26 00:00:13] Checking for CVMFS
[2025-11-26 00:00:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:00:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:00:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:00:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:00:15] 2.13.2.0 6099 33954 295968 153309 2 312 22967242 40960000 9525 16776704 0 37657499 99.767 23029014 36122 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:00:15] CVMFS is ok
[2025-11-26 00:00:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:00:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:00:15] Further information can be found at the LHC@home message board.
[2025-11-26 00:00:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:00:15] Checking for apptainer binary...
[2025-11-26 00:00:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:00:15] Running /usr/bin/apptainer --version
[2025-11-26 00:00:15] apptainer version 1.4.4-1.el9
[2025-11-26 00:00:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:00:16] c-210-31-2.aglt2.org
[2025-11-26 00:00:16] apptainer works
[2025-11-26 00:00:16] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:00:16] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:00:16] Starting ATLAS job with PandaID=6895386633
[2025-11-26 00:00:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:01:03]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:01:03] 2025-11-27 12:00:24,426 | INFO     | monitor loop #6795: job 0:6895386633 is in state 'finished'
[2025-11-27 07:01:03] 2025-11-27 12:00:24,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:01:03] 2025-11-27 12:00:26,020 | INFO     | time since job start (111545s) is within the limit (172800.0s)
[2025-11-27 07:01:03] 2025-11-27 12:00:26,936 | INFO     | monitor loop #6796: job 0:6895386633 is in state 'finished'
[2025-11-27 07:01:03] 2025-11-27 12:00:26,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:01:03] 2025-11-27 12:00:28,027 | INFO     | time since job start (111547s) is within the limit (172800.0s)
[2025-11-27 07:01:03] 2025-11-27 12:00:29,119 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 07:01:03] 2025-11-27 12:00:29,122 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2622.010500000001
[2025-11-27 07:01:03] 2025-11-27 12:00:29,161 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895386633/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:01:03] 2025-11-27 12:00:29,162 | INFO     | extracted standard info from prmon json
[2025-11-27 07:01:03] 2025-11-27 12:00:29,162 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:01:03] 2025-11-27 12:00:29,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:01:03] 2025-11-27 12:00:29,194 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:01:03] 2025-11-27 12:00:29,197 | INFO     | sum of square deviations: 1887913147069.797
[2025-11-27 07:01:03] 2025-11-27 12:00:29,353 | INFO     | sum of deviations: 10243430833413.229
[2025-11-27 07:01:03] 2025-11-27 12:00:29,354 | INFO     | mean x: 1764189087.3088717
[2025-11-27 07:01:03] 2025-11-27 12:00:29,354 | INFO     | mean y: 3037668.3329682364
[2025-11-27 07:01:03] 2025-11-27 12:00:29,354 | INFO     | intersect: -9569091706.876438
[2025-11-27 07:01:03] 2025-11-27 12:00:29,356 | INFO     | chi2: 15.417010820999653
[2025-11-27 07:01:03] 2025-11-27 12:00:29,362 | INFO     | sum of square deviations: 1872449034472.1926
[2025-11-27 07:01:03] 2025-11-27 12:00:29,447 | INFO     | monitor loop #6797: job 0:6895386633 is in state 'finished'
[2025-11-27 07:01:03] 2025-11-27 12:00:29,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:01:03] 2025-11-27 12:00:29,589 | INFO     | sum of deviations: 10894299384023.5
[2025-11-27 07:01:03] 2025-11-27 12:00:29,589 | INFO     | mean x: 1764188934.818781
[2025-11-27 07:01:03] 2025-11-27 12:00:29,589 | INFO     | mean y: 3044085.786381109
[2025-11-27 07:01:03] 2025-11-27 12:00:29,589 | INFO     | intersect: -10261375437.554586
[2025-11-27 07:01:03] 2025-11-27 12:00:29,595 | INFO     | chi2: 12.186616038924143
[2025-11-27 07:01:03] 2025-11-27 12:00:29,596 | INFO     | current chi2=12.186616038924143 (change=20.953444345225208 %)
[2025-11-27 07:01:03] 2025-11-27 12:00:29,596 | INFO     | right removable region: 1820
[2025-11-27 07:01:03] 2025-11-27 12:00:29,598 | INFO     | sum of square deviations: 1872444903179.558
[2025-11-27 07:01:03] 2025-11-27 12:00:29,766 | INFO     | sum of deviations: 9479001136138.867
[2025-11-27 07:01:03] 2025-11-27 12:00:29,767 | INFO     | mean x: 1764189239.81933
[2025-11-27 07:01:03] 2025-11-27 12:00:29,767 | INFO     | mean y: 3045204.1576057114
[2025-11-27 07:01:03] 2025-11-27 12:00:29,767 | INFO     | intersect: -8927926158.585752
[2025-11-27 07:01:03] 2025-11-27 12:00:29,773 | INFO     | chi2: 11.37116604098617
[2025-11-27 07:01:03] 2025-11-27 12:00:29,773 | INFO     | current chi2=11.37116604098617 (change=26.242731661721358 %)
[2025-11-27 07:01:03] 2025-11-27 12:00:29,775 | INFO     | sum of square deviations: 1857061358551.422
[2025-11-27 07:01:03] 2025-11-27 12:00:29,902 | INFO     | sum of deviations: 8838772047058.36
[2025-11-27 07:01:03] 2025-11-27 12:00:29,903 | INFO     | mean x: 1764189392.329846
[2025-11-27 07:01:03] 2025-11-27 12:00:29,903 | INFO     | mean y: 3051549.8975770925
[2025-11-27 07:01:03] 2025-11-27 12:00:29,903 | INFO     | intersect: -8393691947.476819
[2025-11-27 07:01:03] 2025-11-27 12:00:29,905 | INFO     | chi2: 8.650795951791874
[2025-11-27 07:01:03] 2025-11-27 12:00:29,905 | INFO     | current chi2=8.650795951791874 (change=23.92340485917634 %)
[2025-11-27 07:01:03] 2025-11-27 12:00:29,905 | INFO     | left removable region: 20
[2025-11-27 07:01:03] 2025-11-27 12:00:29,907 | INFO     | sum of square deviations: 1808408991031.063
[2025-11-27 07:01:03] 2025-11-27 12:00:30,076 | INFO     | sum of deviations: 9108334004063.893
[2025-11-27 07:01:03] 2025-11-27 12:00:30,076 | INFO     | mean x: 1764189514.3455555
[2025-11-27 07:01:03] 2025-11-27 12:00:30,076 | INFO     | mean y: 3064523.898888889
[2025-11-27 07:01:03] 2025-11-27 12:00:30,076 | INFO     | intersect: -8882551187.381643
[2025-11-27 07:01:03] 2025-11-27 12:00:30,078 | INFO     | chi2: 3.9884533310178267
[2025-11-27 07:01:03] 2025-11-27 12:00:30,079 | INFO     | current memory leak: 5.04 B/s (using 1800 data points, chi2=3.99)
[2025-11-27 07:01:03] 2025-11-27 12:00:30,080 | INFO     | could have reported an average CPU frequency of 2757 MHz (64 samples)
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | ..............................
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . Timing measurements:
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . get job = 0 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . initial setup = 5 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . payload setup = 45 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . stage-in = 0 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . payload execution = 111407 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . stage-out = 6 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | . log creation = 3 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,081 | INFO     | ..............................
[2025-11-27 07:01:03] 2025-11-27 12:00:30,270 | INFO     | PID=2461714 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:01:03] 2025-11-27 12:00:30,272 | INFO     | .. there are 10 such processes running
[2025-11-27 07:01:03] 2025-11-27 12:00:30,419 | INFO     | 
[2025-11-27 07:01:03] 2025-11-27 12:00:30,421 | INFO     | job summary report
[2025-11-27 07:01:03] 2025-11-27 12:00:30,421 | INFO     | --------------------------------------------------
[2025-11-27 07:01:03] 2025-11-27 12:00:30,421 | INFO     | PanDA job id: 6895386633
[2025-11-27 07:01:03] 2025-11-27 12:00:30,421 | INFO     | task id: 47556149
[2025-11-27 07:01:03] 2025-11-27 12:00:30,421 | INFO     | errors: (none)
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | pilot state: finished 
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | transexitcode: 0
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | exeerrorcode: 0
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | exeerrordiag: 
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | exitcode: 0
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | exitmsg: OK
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | cpuconsumptiontime: 254615 s
[2025-11-27 07:01:03] 2025-11-27 12:00:30,422 | INFO     | nevents: 1000
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | neventsw: 0
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | pid: 2484034
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | pgrp: 2484034
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | corecount: 9
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | event service: False
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | sizes: {0: 2284088, 1: 2284144, 2: 2284371, 3: 2284399, 14: 2284399, 25: 2284427, 30: 2284845, 36: 2284873, 111456: 2361480, 111463: 2370474, 111466: 2370530, 1114
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | --------------------------------------------------
[2025-11-27 07:01:03] 2025-11-27 12:00:30,423 | INFO     | 
[2025-11-27 07:01:03] 2025-11-27 12:00:30,424 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 07:01:03] 2025-11-27 12:00:30,462 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:01:03] 2025-11-27 12:00:30,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:01:03] 2025-11-27 12:00:30,465 | INFO     | job 6895386633 has completed (purged errors)
[2025-11-27 07:01:03] 2025-11-27 12:00:30,465 | INFO     | overall cleanup function is called
[2025-11-27 07:01:03] 2025-11-27 12:00:31,494 | INFO     | --- collectZombieJob: --- 10, [2484034]
[2025-11-27 07:01:03] 2025-11-27 12:00:31,495 | INFO     | zombie collector waiting for pid 2484034
[2025-11-27 07:01:03] 2025-11-27 12:00:31,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:01:03] 2025-11-27 12:00:31,495 | INFO     | collected zombie processes
[2025-11-27 07:01:03] 2025-11-27 12:00:31,495 | INFO     | will attempt to kill all subprocesses of pid=2484034
[2025-11-27 07:01:03] 2025-11-27 12:00:32,877 | INFO     | process IDs to be killed: [2484034] (in reverse order)
[2025-11-27 07:01:03] 2025-11-27 12:00:32,988 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:01:03] 2025-11-27 12:00:32,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:01:03] 2025-11-27 12:00:33,044 | INFO     | did not find any defunct processes belonging to 2484034
[2025-11-27 07:01:03] 2025-11-27 12:00:33,097 | INFO     | did not find any defunct processes belonging to 2484034
[2025-11-27 07:01:03] 2025-11-27 12:00:33,102 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:01:03] 2025-11-27 12:00:33,102 | INFO     | ready for new job
[2025-11-27 07:01:03] 2025-11-27 12:00:33,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:01:03] 2025-11-27 12:00:33,184 | INFO     | ***************************************
[2025-11-27 07:01:03] 2025-11-27 12:00:33,184 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:01:03] 2025-11-27 12:00:33,184 | INFO     | ***************************************
[2025-11-27 07:01:03] 2025-11-27 12:00:33,184 | INFO     | 
[2025-11-27 07:01:03] 2025-11-27 12:00:33,188 | INFO     | architecture information:
[2025-11-27 07:01:03] 2025-11-27 12:00:33,193 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:01:03] 2025-11-27 12:00:33,348 | INFO     | cat /etc/os-release:
[2025-11-27 07:01:03] NAME="CentOS Linux"
[2025-11-27 07:01:03] VERSION="7 (Core)"
[2025-11-27 07:01:03] ID="centos"
[2025-11-27 07:01:03] ID_LIKE="rhel fedora"
[2025-11-27 07:01:03] VERSION_ID="7"
[2025-11-27 07:01:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:01:03] ANSI_COLOR="0;31"
[2025-11-27 07:01:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:01:03] HOME_URL="https://www.centos.org/"
[2025-11-27 07:01:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:01:03] 
[2025-11-27 07:01:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:01:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:01:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:01:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:01:03] 
[2025-11-27 07:01:03] 2025-11-27 12:00:33,349 | INFO     | ***************************************
[2025-11-27 07:01:03] 2025-11-27 12:00:33,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 07:01:03] 2025-11-27 12:00:33,923 | INFO     | sufficient remaining disk space (70418169856 B)
[2025-11-27 07:01:03] 2025-11-27 12:00:33,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:01:03] 2025-11-27 12:00:33,924 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:01:03] 2025-11-27 12:00:33,924 | INFO     | update_server=False
[2025-11-27 07:01:03] 2025-11-27 12:00:33,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:01:03] 2025-11-27 12:00:33,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:03] 2025-11-27 12:00:33,926 | INFO     | aborting loop
[2025-11-27 07:01:03] 2025-11-27 12:00:34,043 | INFO     | all job control threads have been joined
[2025-11-27 07:01:03] 2025-11-27 12:00:34,603 | INFO     | all payload control threads have been joined
[2025-11-27 07:01:03] 2025-11-27 12:00:34,931 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:34,947 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:34,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:01:03] 2025-11-27 12:00:35,018 | INFO     | all data control threads have been joined
[2025-11-27 07:01:03] 2025-11-27 12:00:35,050 | INFO     | [job] control thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:35,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:03] 2025-11-27 12:00:35,414 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:35,414 | INFO     | [job] validate thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:35,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:35,472 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:35,610 | INFO     | [payload] control thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:35,697 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:36,025 | INFO     | [data] control thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:36,273 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:36,373 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:36,385 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:36,412 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:36,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:01:03] 2025-11-27 12:00:36,996 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:40,352 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:01:03] 2025-11-27 12:00:40,602 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:01:03] 2025-11-27 12:00:42,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990834411328)>', '<ExcThread(monitor, started 139990180796160)>']
[2025-11-27 07:01:03] 2025-11-27 12:00:47,466 | INFO     | all workflow threads have been joined
[2025-11-27 07:01:03] 2025-11-27 12:00:47,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:01:03] 2025-11-27 12:00:47,467 | INFO     | traces error code: 0
[2025-11-27 07:01:03] 2025-11-27 12:00:47,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:01:03] 2025-11-27 12:01:02,722 | INFO     | PID=2461714 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:01:03] 2025-11-27 12:01:02,723 | INFO     | .. there are 10 such processes running
[2025-11-27 07:01:03] 2025-11-27 12:01:02,723 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:01:03] 2025-11-27 12:01:02,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:01:03] 2025-11-27 12:01:02,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:01:03] 2025-11-27 12:01:02,724 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:01:03] 2025-11-27 12:01:02,724 | INFO     | [monitor] control thread has ended
[2025-11-27 07:01:03] 2025-11-27 12:01:02,929 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:01:03] 2025-11-27 12:01:02,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:01:03] 2025-11-27 12:01:02,936 [wrapper] pilotpid: 2461714
[2025-11-27 07:01:03] 2025-11-27 12:01:02,939 [wrapper] Pilot exit status: 0
[2025-11-27 07:01:03] 2025-11-27 12:01:02,961 [wrapper] pandaids: 6895386633
[2025-11-27 07:01:03] 2025-11-27 12:01:03,028 [wrapper] cleanup supervisor_pilot 2299849 2461716
[2025-11-27 07:01:03] 2025-11-27 12:01:03,034 [wrapper] Test setup, not cleaning
[2025-11-27 07:01:03] 2025-11-27 12:01:03,038 [wrapper] apfmon messages muted
[2025-11-27 07:01:03] 2025-11-27 12:01:03,042 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:01:03] 2025-11-27 12:01:03,045 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:01:03]  *** Error codes and diagnostics ***
[2025-11-27 07:01:03]     "exeErrorCode": 0,
[2025-11-27 07:01:03]     "exeErrorDiag": "",
[2025-11-27 07:01:03]     "pilotErrorCode": 0,
[2025-11-27 07:01:03]     "pilotErrorDiag": "",
[2025-11-27 07:01:03]  *** Listing of results directory ***
[2025-11-27 07:01:03] total 1325620
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-27 07:01:03] -rwx------. 1 boincer umatlas     36292 Nov 24 00:52 runpilot2-wrapper.sh
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:52 queuedata.json
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:01:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:00 run_atlas
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:00 job.xml
[2025-11-27 07:01:03] -rw-r--r--. 2 boincer umatlas 408072070 Nov 26 00:00 EVNT.47483658._001250.pool.root.1
[2025-11-27 07:01:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 07:01:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:00 shared
[2025-11-27 07:01:03] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:00 input.tar.gz
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:00 boinc_lockfile
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 00:00 pandaJob.out
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas        57 Nov 26 00:00 setup.sh.local
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas    991877 Nov 26 00:01 agis_schedconf.cvmfs.json
[2025-11-27 07:01:03] drwx------. 5 boincer umatlas      4096 Nov 26 00:01 pilot3
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:43 boinc_task_state.xml
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 06:57 init_data.xml
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas 911197077 Nov 27 06:58 HITS.47556149._002364.pool.root.1
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas      1059 Nov 27 06:59 memory_monitor_summary.json
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas   2866964 Nov 27 07:00 log.47556149._002364.job.log.tgz.1
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas        95 Nov 27 07:00 pilot_heartbeat.json
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas      8638 Nov 27 07:00 heartbeat.json
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:01 wrapper_checkpoint.txt
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas       823 Nov 27 07:01 pilotlog.txt
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:01 boinc_mmap_file
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas  14259500 Nov 27 07:01 log.47556149._002364.job.log.1
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas       353 Nov 27 07:01 output.list
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:01 runtime_log
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas  17141760 Nov 27 07:01 result.tar.gz
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas       665 Nov 27 07:01 uiTNDmofeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoULKDm5pVh1n.diag
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas      9354 Nov 27 07:01 runtime_log.err
[2025-11-27 07:01:03] -rw-r--r--. 1 boincer umatlas     21676 Nov 27 07:01 stderr.txt
[2025-11-27 07:01:03] HITS file was successfully produced:
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas 911197077 Nov 27 06:58 shared/HITS.pool.root.1
[2025-11-27 07:01:03]  *** Contents of shared directory: ***
[2025-11-27 07:01:03] total 1305696
[2025-11-27 07:01:03] -rw-r--r--. 2 boincer umatlas 408072070 Nov 26 00:00 ATLAS.root_0
[2025-11-27 07:01:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:00 start_atlas.sh
[2025-11-27 07:01:03] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:00 input.tar.gz
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas 911197077 Nov 27 06:58 HITS.pool.root.1
[2025-11-27 07:01:03] -rw-------. 1 boincer umatlas  17141760 Nov 27 07:01 result.tar.gz
07:01:04 (2454156): run_atlas exited; CPU time 256085.933773
07:01:04 (2454156): called boinc_finish(0)

</stderr_txt>
]]>

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