Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:29:40 (2920762): wrapper (7.7.26015): starting
19:29:40 (2920762): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 19:29:40] Arguments: --nthreads 9
[2025-11-25 19:29:40] Threads: 9
[2025-11-25 19:29:40] Checking for CVMFS
[2025-11-25 19:29:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 19:29:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 19:29:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 19:29:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 19:29:40] 2.13.3.0 11393 29332 326108 153303 3 174 21420072 32935937 14827 16776704 0 89024490 99.380 140072115 40678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 19:29:40] CVMFS is ok
[2025-11-25 19:29:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:29:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:29:40] Further information can be found at the LHC@home message board.
[2025-11-25 19:29:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:29:40] Checking for apptainer binary...
[2025-11-25 19:29:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 19:29:40] Running /usr/bin/apptainer --version
[2025-11-25 19:29:41] apptainer version 1.4.4-1.el9
[2025-11-25 19:29:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:29:41] c6-5-37-2.aglt2.org
[2025-11-25 19:29:41] apptainer works
[2025-11-25 19:29:41] Set ATHENA_PROC_NUMBER=9
[2025-11-25 19:29:41] Set ATHENA_CORE_NUMBER=9
[2025-11-25 19:29:41] Starting ATLAS job with PandaID=6895385438
[2025-11-25 19:29:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:45:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:45:21] 2025-11-27 17:27:05,946 | INFO     | .. there are 27 such processes running
[2025-11-27 12:45:21] 2025-11-27 17:27:06,948 | INFO     | time since job start (147434s) is within the limit (172800.0s)
[2025-11-27 12:45:21] 2025-11-27 17:27:07,524 | INFO     | monitor loop #8919: job 0:6895385438 is in state 'finished'
[2025-11-27 12:45:21] 2025-11-27 17:27:07,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:45:21] 2025-11-27 17:27:08,973 | INFO     | time since job start (147436s) is within the limit (172800.0s)
[2025-11-27 12:45:21] 2025-11-27 17:27:10,044 | INFO     | monitor loop #8920: job 0:6895385438 is in state 'finished'
[2025-11-27 12:45:21] 2025-11-27 17:27:10,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:45:21] 2025-11-27 17:27:10,989 | INFO     | time since job start (147438s) is within the limit (172800.0s)
[2025-11-27 12:45:21] 2025-11-27 17:27:12,553 | INFO     | monitor loop #8921: job 0:6895385438 is in state 'finished'
[2025-11-27 12:45:21] 2025-11-27 17:27:12,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:45:21] 2025-11-27 17:27:12,996 | INFO     | time since job start (147440s) is within the limit (172800.0s)
[2025-11-27 12:45:21] 2025-11-27 17:27:13,893 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 12:45:21] 2025-11-27 17:27:13,970 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2880.318553571429
[2025-11-27 12:45:21] 2025-11-27 17:27:14,177 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895385438/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:45:21] 2025-11-27 17:27:14,177 | INFO     | extracted standard info from prmon json
[2025-11-27 12:45:21] 2025-11-27 17:27:14,178 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:45:21] 2025-11-27 17:27:14,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:45:21] 2025-11-27 17:27:14,870 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:45:21] 2025-11-27 17:27:14,907 | INFO     | sum of square deviations: 4373077788394.04
[2025-11-27 12:45:21] 2025-11-27 17:27:15,013 | INFO     | time since job start (147443s) is within the limit (172800.0s)
[2025-11-27 12:45:21] 2025-11-27 17:27:15,134 | INFO     | monitor loop #8922: job 0:6895385438 is in state 'finished'
[2025-11-27 12:45:21] 2025-11-27 17:27:15,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:45:21] 2025-11-27 17:27:17,146 | INFO     | time since job start (147445s) is within the limit (172800.0s)
[2025-11-27 12:45:21] 2025-11-27 17:27:17,321 | INFO     | sum of deviations: 1861792004635.1396
[2025-11-27 12:45:21] 2025-11-27 17:27:17,321 | INFO     | mean x: 1764190678.4296358
[2025-11-27 12:45:21] 2025-11-27 17:27:17,321 | INFO     | mean y: 3114742.333195364
[2025-11-27 12:45:21] 2025-11-27 17:27:17,321 | INFO     | intersect: -747970936.6065228
[2025-11-27 12:45:21] 2025-11-27 17:27:17,328 | INFO     | chi2: 37.30810338850868
[2025-11-27 12:45:21] 2025-11-27 17:27:17,331 | INFO     | sum of square deviations: 4345986490311.0493
[2025-11-27 12:45:21] 2025-11-27 17:27:17,525 | INFO     | sum of deviations: 2848276635852.3315
[2025-11-27 12:45:21] 2025-11-27 17:27:17,525 | INFO     | mean x: 1764190525.9357114
[2025-11-27 12:45:21] 2025-11-27 17:27:17,525 | INFO     | mean y: 3120294.653670676
[2025-11-27 12:45:21] 2025-11-27 17:27:17,525 | INFO     | intersect: -1153096519.9676473
[2025-11-27 12:45:21] 2025-11-27 17:27:17,532 | INFO     | chi2: 33.14472359115512
[2025-11-27 12:45:21] 2025-11-27 17:27:17,532 | INFO     | current chi2=33.14472359115512 (change=11.15945175233948 %)
[2025-11-27 12:45:21] 2025-11-27 17:27:17,532 | INFO     | right removable region: 2410
[2025-11-27 12:45:21] 2025-11-27 17:27:17,539 | INFO     | sum of square deviations: 4345982172731.031
[2025-11-27 12:45:21] 2025-11-27 17:27:17,735 | INFO     | sum of deviations: 1253526227000.7053
[2025-11-27 12:45:21] 2025-11-27 17:27:17,736 | INFO     | mean x: 1764190830.9357114
[2025-11-27 12:45:21] 2025-11-27 17:27:17,737 | INFO     | mean y: 3118163.6304437993
[2025-11-27 12:45:21] 2025-11-27 17:27:17,737 | INFO     | intersect: -505733319.9048401
[2025-11-27 12:45:21] 2025-11-27 17:27:17,740 | INFO     | chi2: 35.551646359810505
[2025-11-27 12:45:21] 2025-11-27 17:27:17,749 | INFO     | current chi2=35.551646359810505 (change=4.707977273482042 %)
[2025-11-27 12:45:21] 2025-11-27 17:27:17,749 | INFO     | left removable region: 10
[2025-11-27 12:45:21] 2025-11-27 17:27:17,752 | INFO     | sum of square deviations: 4286772144275.068
[2025-11-27 12:45:21] 2025-11-27 17:27:17,785 | INFO     | monitor loop #8923: job 0:6895385438 is in state 'finished'
[2025-11-27 12:45:21] 2025-11-27 17:27:17,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:45:21] 2025-11-27 17:27:18,407 | INFO     | sum of deviations: 2228813695815.6445
[2025-11-27 12:45:21] 2025-11-27 17:27:18,407 | INFO     | mean x: 1764190800.44625
[2025-11-27 12:45:21] 2025-11-27 17:27:18,412 | INFO     | mean y: 3125786.16
[2025-11-27 12:45:21] 2025-11-27 17:27:18,412 | INFO     | intersect: -914126749.251236
[2025-11-27 12:45:21] 2025-11-27 17:27:18,415 | INFO     | chi2: 30.63247376821334
[2025-11-27 12:45:21] 2025-11-27 17:27:18,415 | INFO     | current memory leak: 0.52 B/s (using 2400 data points, chi2=30.63)
[2025-11-27 12:45:21] 2025-11-27 17:27:18,421 | INFO     | could have reported an average CPU frequency of 2892 MHz (84 samples)
[2025-11-27 12:45:21] 2025-11-27 17:27:18,421 | INFO     | ..............................
[2025-11-27 12:45:21] 2025-11-27 17:27:18,421 | INFO     | . Timing measurements:
[2025-11-27 12:45:21] 2025-11-27 17:27:18,421 | INFO     | . get job = 0 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,422 | INFO     | . initial setup = 2 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,422 | INFO     | . payload setup = 5 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,422 | INFO     | . stage-in = 0 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,422 | INFO     | . payload execution = 147340 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,422 | INFO     | . stage-out = 27 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,422 | INFO     | . log creation = 10 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,422 | INFO     | ..............................
[2025-11-27 12:45:21] 2025-11-27 17:27:18,613 | INFO     | 
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | job summary report
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | --------------------------------------------------
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | PanDA job id: 6895385438
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | task id: 47556149
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | errors: (none)
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | pilot state: finished 
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | transexitcode: 0
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | exeerrorcode: 0
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | exeerrordiag: 
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | exitcode: 0
[2025-11-27 12:45:21] 2025-11-27 17:27:18,614 | INFO     | exitmsg: OK
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | cpuconsumptiontime: 259092 s
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | nevents: 1000
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | neventsw: 0
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | pid: 2940385
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | pgrp: 2940385
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | corecount: 9
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | event service: False
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | sizes: {0: 2284309, 4: 2284571, 11: 2284599, 147349: 2378786, 147378: 2387780, 147379: 2387836, 147430: 2388210}
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | --------------------------------------------------
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | 
[2025-11-27 12:45:21] 2025-11-27 17:27:18,615 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 12:45:21] 2025-11-27 17:27:18,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:45:21] 2025-11-27 17:27:18,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,670 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:45:21] 2025-11-27 17:27:18,670 | INFO     | job 6895385438 has completed (purged errors)
[2025-11-27 12:45:21] 2025-11-27 17:27:18,670 | INFO     | overall cleanup function is called
[2025-11-27 12:45:21] 2025-11-27 17:27:19,709 | INFO     | --- collectZombieJob: --- 10, [2940385]
[2025-11-27 12:45:21] 2025-11-27 17:27:19,710 | INFO     | zombie collector waiting for pid 2940385
[2025-11-27 12:45:21] 2025-11-27 17:27:19,710 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:45:21] 2025-11-27 17:27:19,710 | INFO     | collected zombie processes
[2025-11-27 12:45:21] 2025-11-27 17:27:19,710 | INFO     | will attempt to kill all subprocesses of pid=2940385
[2025-11-27 12:45:21] 2025-11-27 17:27:20,648 | INFO     | process IDs to be killed: [2940385] (in reverse order)
[2025-11-27 12:45:21] 2025-11-27 17:27:23,031 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:45:21] 2025-11-27 17:27:23,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:45:21] 2025-11-27 17:27:23,154 | INFO     | did not find any defunct processes belonging to 2940385
[2025-11-27 12:45:21] 2025-11-27 17:27:23,288 | INFO     | did not find any defunct processes belonging to 2940385
[2025-11-27 12:45:21] 2025-11-27 17:27:23,315 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:45:21] 2025-11-27 17:27:23,315 | INFO     | ready for new job
[2025-11-27 12:45:21] 2025-11-27 17:27:23,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:45:21] 2025-11-27 17:27:23,377 | INFO     | ***************************************
[2025-11-27 12:45:21] 2025-11-27 17:27:23,377 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:45:21] 2025-11-27 17:27:23,377 | INFO     | ***************************************
[2025-11-27 12:45:21] 2025-11-27 17:27:23,377 | INFO     | 
[2025-11-27 12:45:21] 2025-11-27 17:27:23,413 | INFO     | architecture information:
[2025-11-27 12:45:21] 2025-11-27 17:27:23,438 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:45:21] 2025-11-27 17:27:23,607 | INFO     | cat /etc/os-release:
[2025-11-27 12:45:21] NAME="CentOS Linux"
[2025-11-27 12:45:21] VERSION="7 (Core)"
[2025-11-27 12:45:21] ID="centos"
[2025-11-27 12:45:21] ID_LIKE="rhel fedora"
[2025-11-27 12:45:21] VERSION_ID="7"
[2025-11-27 12:45:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:45:21] ANSI_COLOR="0;31"
[2025-11-27 12:45:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:45:21] HOME_URL="https://www.centos.org/"
[2025-11-27 12:45:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:45:21] 
[2025-11-27 12:45:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:45:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:45:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:45:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:45:21] 
[2025-11-27 12:45:21] 2025-11-27 17:27:23,607 | INFO     | ***************************************
[2025-11-27 12:45:21] 2025-11-27 17:27:24,111 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 12:45:21] 2025-11-27 17:27:24,199 | INFO     | sufficient remaining disk space (67949821952 B)
[2025-11-27 12:45:21] 2025-11-27 17:27:24,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:45:21] 2025-11-27 17:27:24,200 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:45:21] 2025-11-27 17:27:24,200 | INFO     | update_server=False
[2025-11-27 12:45:21] 2025-11-27 17:27:24,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:45:21] 2025-11-27 17:27:24,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:45:21] 2025-11-27 17:27:24,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:45:21] 2025-11-27 17:27:24,200 | INFO     | aborting loop
[2025-11-27 12:45:21] 2025-11-27 17:27:24,668 | INFO     | all payload control threads have been joined
[2025-11-27 12:45:21] 2025-11-27 17:27:24,668 | INFO     | all data control threads have been joined
[2025-11-27 12:45:21] 2025-11-27 17:27:25,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:45:21] 2025-11-27 17:27:25,206 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,206 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,207 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,393 | INFO     | all job control threads have been joined
[2025-11-27 12:45:21] 2025-11-27 17:27:25,676 | INFO     | [payload] control thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,684 | INFO     | [data] control thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,910 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,923 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,929 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:25,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:26,212 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:26,212 | INFO     | [job] validate thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:26,399 | INFO     | [job] control thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:26,779 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:26,784 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:27,157 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:27,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:45:21] 2025-11-27 17:27:31,222 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:45:21] 2025-11-27 17:27:51,561 | INFO     | PID=2926576 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:45:21] 2025-11-27 17:27:51,562 | INFO     | .. there are 27 such processes running
[2025-11-27 12:45:21] 2025-11-27 17:27:51,562 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:45:21] 2025-11-27 17:27:51,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:45:21] 2025-11-27 17:27:51,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:45:21] 2025-11-27 17:28:22,413 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:45:21] 2025-11-27 17:28:22,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476375971648)>', '<ExcThread(monitor, started 140475738605312)>']
[2025-11-27 12:45:21] 2025-11-27 17:28:22,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:45:21] 2025-11-27 17:28:22,965 | INFO     | [monitor] control thread has ended
[2025-11-27 12:45:21] 2025-11-27 17:28:27,598 | INFO     | all workflow threads have been joined
[2025-11-27 12:45:21] 2025-11-27 17:28:27,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:45:21] 2025-11-27 17:28:27,599 | INFO     | traces error code: 0
[2025-11-27 12:45:21] 2025-11-27 17:28:27,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:45:21] 2025-11-27 17:28:30,205 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:45:21] 2025-11-27 17:28:30,257 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:45:21] 2025-11-27 17:28:30,275 [wrapper] pilotpid: 2926576
[2025-11-27 12:45:21] 2025-11-27 17:28:30,291 [wrapper] Pilot exit status: 0
[2025-11-27 12:45:21] 2025-11-27 17:28:30,395 [wrapper] pandaids: 6895385438
[2025-11-27 12:45:21] 2025-11-27 17:28:30,547 [wrapper] cleanup supervisor_pilot 1792837 2926577
[2025-11-27 12:45:21] 2025-11-27 17:28:30,593 [wrapper] Test setup, not cleaning
[2025-11-27 12:45:21] 2025-11-27 17:28:30,644 [wrapper] apfmon messages muted
[2025-11-27 12:45:21] 2025-11-27 17:28:30,670 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:45:21] 2025-11-27 17:28:30,701 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:45:21]  *** Error codes and diagnostics ***
[2025-11-27 12:45:21]     "exeErrorCode": 0,
[2025-11-27 12:45:21]     "exeErrorDiag": "",
[2025-11-27 12:45:21]     "pilotErrorCode": 0,
[2025-11-27 12:45:21]     "pilotErrorDiag": "",
[2025-11-27 12:45:21]  *** Listing of results directory ***
[2025-11-27 12:45:21] total 1361696
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:12 queuedata.json
[2025-11-27 12:45:21] -rwx------. 1 boincer umatlas     36292 Nov 24 00:14 runpilot2-wrapper.sh
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas       100 Nov 25 19:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:45:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 19:29 run_atlas
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas       105 Nov 25 19:29 job.xml
[2025-11-27 12:45:21] -rw-r--r--. 2 boincer umatlas 411554268 Nov 25 19:29 EVNT.47483658._001237.pool.root.1
[2025-11-27 12:45:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:29 start_atlas.sh
[2025-11-27 12:45:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 19:29 shared
[2025-11-27 12:45:21] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 19:29 input.tar.gz
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas         0 Nov 25 19:29 boinc_lockfile
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 19:29 pandaJob.out
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas        57 Nov 25 19:29 setup.sh.local
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas    991877 Nov 25 19:29 agis_schedconf.cvmfs.json
[2025-11-27 12:45:21] drwx------. 5 boincer umatlas      4096 Nov 25 19:29 pilot3
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas       534 Nov 27 11:11 boinc_task_state.xml
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas 935173142 Nov 27 12:22 HITS.47556149._002231.pool.root.1
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas      1058 Nov 27 12:25 memory_monitor_summary.json
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas   3251863 Nov 27 12:26 log.47556149._002231.job.log.tgz.1
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas      8617 Nov 27 12:27 heartbeat.json
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas        95 Nov 27 12:27 pilot_heartbeat.json
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas      4824 Nov 27 12:28 pilotlog.txt
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas  18616071 Nov 27 12:28 log.47556149._002231.job.log.1
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas       353 Nov 27 12:28 output.list
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:28 runtime_log
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas  21882880 Nov 27 12:28 result.tar.gz
[2025-11-27 12:45:21] -rw-------. 1 boincer umatlas       664 Nov 27 12:28 X0GNDm84dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0SLKDmehgJOo.diag
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas      9349 Nov 27 12:28 runtime_log.err
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 12:45 init_data.xml
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas        30 Nov 27 12:45 wrapper_checkpoint.txt
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:45 boinc_mmap_file
[2025-11-27 12:45:21] -rw-r--r--. 1 boincer umatlas     21741 Nov 27 12:45 stderr.txt
[2025-11-27 12:45:22] HITS file was successfully produced:
[2025-11-27 12:45:22] -rw-------. 1 boincer umatlas 935173142 Nov 27 12:22 shared/HITS.pool.root.1
[2025-11-27 12:45:22]  *** Contents of shared directory: ***
[2025-11-27 12:45:22] total 1337140
[2025-11-27 12:45:22] -rw-r--r--. 2 boincer umatlas 411554268 Nov 25 19:29 ATLAS.root_0
[2025-11-27 12:45:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 19:29 start_atlas.sh
[2025-11-27 12:45:22] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 19:29 input.tar.gz
[2025-11-27 12:45:22] -rw-------. 1 boincer umatlas 935173142 Nov 27 12:22 HITS.pool.root.1
[2025-11-27 12:45:22] -rw-------. 1 boincer umatlas  21882880 Nov 27 12:28 result.tar.gz
12:45:23 (2920762): run_atlas exited; CPU time 262507.232427
12:45:23 (2920762): called boinc_finish(0)

</stderr_txt>
]]>

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