Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:01 (932442): wrapper (7.7.26015): starting
00:05:01 (932442): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:05:01] Arguments: --nthreads 9
[2025-11-26 00:05:01] Threads: 9
[2025-11-26 00:05:01] Checking for CVMFS
[2025-11-26 00:05:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:05:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:05:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:05:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:05:04] 2.13.2.0 7688 32467 181556 153309 2 66 25966942 39288833 7507 16776704 0 23606730 99.620 24965135 37948 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:05:04] CVMFS is ok
[2025-11-26 00:05:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:05:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:05:04] Further information can be found at the LHC@home message board.
[2025-11-26 00:05:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:05:04] Checking for apptainer binary...
[2025-11-26 00:05:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:05:04] Running /usr/bin/apptainer --version
[2025-11-26 00:05:04] apptainer version 1.4.4-1.el9
[2025-11-26 00:05:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:05:05] c-210-1.aglt2.org
[2025-11-26 00:05:05] apptainer works
[2025-11-26 00:05:05] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:05:05] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:05:06] Starting ATLAS job with PandaID=6895386447
[2025-11-26 00:05:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:15:11]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:15:11] 2025-11-27 19:14:07,394 | INFO     | time since job start (137245s) is within the limit (172800.0s)
[2025-11-27 14:15:11] 2025-11-27 19:14:08,987 | INFO     | monitor loop #8068: job 0:6895386447 is in state 'finished'
[2025-11-27 14:15:11] 2025-11-27 19:14:08,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:15:11] 2025-11-27 19:14:09,401 | INFO     | time since job start (137247s) is within the limit (172800.0s)
[2025-11-27 14:15:11] 2025-11-27 19:14:11,407 | INFO     | time since job start (137249s) is within the limit (172800.0s)
[2025-11-27 14:15:11] 2025-11-27 19:14:11,501 | INFO     | monitor loop #8069: job 0:6895386447 is in state 'finished'
[2025-11-27 14:15:11] 2025-11-27 19:14:11,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:15:11] 2025-11-27 19:14:13,414 | INFO     | time since job start (137251s) is within the limit (172800.0s)
[2025-11-27 14:15:11] 2025-11-27 19:14:13,475 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 14:15:11] 2025-11-27 19:14:13,482 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8634500000007
[2025-11-27 14:15:11] 2025-11-27 19:14:13,489 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895386447/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 14:15:11] 2025-11-27 19:14:13,490 | INFO     | extracted standard info from prmon json
[2025-11-27 14:15:11] 2025-11-27 19:14:13,490 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:15:11] 2025-11-27 19:14:13,490 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:15:11] 2025-11-27 19:14:13,528 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:15:11] 2025-11-27 19:14:13,531 | INFO     | sum of square deviations: 3517330268440.042
[2025-11-27 14:15:11] 2025-11-27 19:14:13,658 | INFO     | sum of deviations: 14635322232450.584
[2025-11-27 14:15:11] 2025-11-27 19:14:13,658 | INFO     | mean x: 1764202284.611037
[2025-11-27 14:15:11] 2025-11-27 19:14:13,658 | INFO     | mean y: 3079273.9114374723
[2025-11-27 14:15:11] 2025-11-27 19:14:13,659 | INFO     | intersect: -7337621470.110309
[2025-11-27 14:15:11] 2025-11-27 19:14:13,662 | INFO     | chi2: 16.418428490367866
[2025-11-27 14:15:11] 2025-11-27 19:14:13,665 | INFO     | sum of square deviations: 3493902815468.5356
[2025-11-27 14:15:11] 2025-11-27 19:14:13,786 | INFO     | sum of deviations: 15426236158934.668
[2025-11-27 14:15:11] 2025-11-27 19:14:13,787 | INFO     | mean x: 1764202132.1257806
[2025-11-27 14:15:11] 2025-11-27 19:14:13,787 | INFO     | mean y: 3084421.3238180196
[2025-11-27 14:15:11] 2025-11-27 19:14:13,787 | INFO     | intersect: -7786198841.444552
[2025-11-27 14:15:11] 2025-11-27 19:14:13,790 | INFO     | chi2: 13.372143467248561
[2025-11-27 14:15:11] 2025-11-27 19:14:13,790 | INFO     | current chi2=13.372143467248561 (change=18.55405969521661 %)
[2025-11-27 14:15:11] 2025-11-27 19:14:13,790 | INFO     | right removable region: 2241
[2025-11-27 14:15:11] 2025-11-27 19:14:13,793 | INFO     | sum of square deviations: 3493893890753.776
[2025-11-27 14:15:11] 2025-11-27 19:14:13,914 | INFO     | sum of deviations: 13675835116271.158
[2025-11-27 14:15:11] 2025-11-27 19:14:13,915 | INFO     | mean x: 1764202437.1253345
[2025-11-27 14:15:11] 2025-11-27 19:14:13,915 | INFO     | mean y: 3085517.28412132
[2025-11-27 14:15:11] 2025-11-27 19:14:13,915 | INFO     | intersect: -6902373662.715372
[2025-11-27 14:15:11] 2025-11-27 19:14:13,918 | INFO     | chi2: 12.304533861501803
[2025-11-27 14:15:11] 2025-11-27 19:14:13,918 | INFO     | current chi2=12.304533861501803 (change=25.056567571491666 %)
[2025-11-27 14:15:11] 2025-11-27 19:14:13,921 | INFO     | sum of square deviations: 3470561794091.5986
[2025-11-27 14:15:11] 2025-11-27 19:14:14,089 | INFO     | sum of deviations: 12840823661972.336
[2025-11-27 14:15:11] 2025-11-27 19:14:14,090 | INFO     | mean x: 1764202589.6396961
[2025-11-27 14:15:11] 2025-11-27 19:14:14,090 | INFO     | mean y: 3090974.6964684846
[2025-11-27 14:15:11] 2025-11-27 19:14:14,090 | INFO     | intersect: -6524328994.060433
[2025-11-27 14:15:11] 2025-11-27 19:14:14,138 | INFO     | chi2: 9.287507356958466
[2025-11-27 14:15:11] 2025-11-27 19:14:14,139 | INFO     | current chi2=9.287507356958466 (change=24.51963266957193 %)
[2025-11-27 14:15:11] 2025-11-27 19:14:14,139 | INFO     | left removable region: 20
[2025-11-27 14:15:11] 2025-11-27 19:14:14,190 | INFO     | sum of square deviations: 3396614101726.105
[2025-11-27 14:15:11] 2025-11-27 19:14:14,328 | INFO     | monitor loop #8070: job 0:6895386447 is in state 'finished'
[2025-11-27 14:15:11] 2025-11-27 19:14:14,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:15:11] 2025-11-27 19:14:14,861 | INFO     | sum of deviations: 12853158283299.887
[2025-11-27 14:15:11] 2025-11-27 19:14:14,862 | INFO     | mean x: 1764202711.6659162
[2025-11-27 14:15:11] 2025-11-27 19:14:14,862 | INFO     | mean y: 3103605.338135975
[2025-11-27 14:15:11] 2025-11-27 19:14:14,862 | INFO     | intersect: -6672831905.070752
[2025-11-27 14:15:11] 2025-11-27 19:14:14,865 | INFO     | chi2: 3.595766896829449
[2025-11-27 14:15:11] 2025-11-27 19:14:14,865 | INFO     | current memory leak: 3.78 B/s (using 2221 data points, chi2=3.60)
[2025-11-27 14:15:11] 2025-11-27 19:14:14,867 | INFO     | could have reported an average CPU frequency of 2599 MHz (78 samples)
[2025-11-27 14:15:11] 2025-11-27 19:14:14,867 | INFO     | ..............................
[2025-11-27 14:15:11] 2025-11-27 19:14:14,867 | INFO     | . Timing measurements:
[2025-11-27 14:15:11] 2025-11-27 19:14:14,867 | INFO     | . get job = 0 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,867 | INFO     | . initial setup = 10 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,867 | INFO     | . payload setup = 59 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,867 | INFO     | . stage-in = 0 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,868 | INFO     | . payload execution = 137084 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,868 | INFO     | . stage-out = 12 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,868 | INFO     | . log creation = 1 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,868 | INFO     | ..............................
[2025-11-27 14:15:11] 2025-11-27 19:14:14,974 | INFO     | 
[2025-11-27 14:15:11] 2025-11-27 19:14:14,975 | INFO     | job summary report
[2025-11-27 14:15:11] 2025-11-27 19:14:14,975 | INFO     | --------------------------------------------------
[2025-11-27 14:15:11] 2025-11-27 19:14:14,975 | INFO     | PanDA job id: 6895386447
[2025-11-27 14:15:11] 2025-11-27 19:14:14,975 | INFO     | task id: 47556149
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | errors: (none)
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | pilot state: finished 
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | transexitcode: 0
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | exeerrorcode: 0
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | exeerrordiag: 
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | exitcode: 0
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | exitmsg: OK
[2025-11-27 14:15:11] 2025-11-27 19:14:14,976 | INFO     | cpuconsumptiontime: 292250 s
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | nevents: 1000
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | neventsw: 0
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | pid: 949861
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | pgrp: 949861
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | corecount: 9
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | event service: False
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | sizes: {0: 2283486, 1: 2284171, 3: 2284171, 4: 2284199, 5: 2284398, 6: 2284454, 17: 2284610, 28: 2284638, 35: 2284928, 39: 2284956, 137147: 2373424, 137160: 238241
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | --------------------------------------------------
[2025-11-27 14:15:11] 2025-11-27 19:14:14,977 | INFO     | 
[2025-11-27 14:15:11] 2025-11-27 19:14:14,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 14:15:11] 2025-11-27 19:14:15,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:15:11] 2025-11-27 19:14:15,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:15:11] 2025-11-27 19:14:15,014 | INFO     | job 6895386447 has completed (purged errors)
[2025-11-27 14:15:11] 2025-11-27 19:14:15,014 | INFO     | overall cleanup function is called
[2025-11-27 14:15:11] 2025-11-27 19:14:16,044 | INFO     | --- collectZombieJob: --- 10, [949861]
[2025-11-27 14:15:11] 2025-11-27 19:14:16,044 | INFO     | zombie collector waiting for pid 949861
[2025-11-27 14:15:11] 2025-11-27 19:14:16,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:15:11] 2025-11-27 19:14:16,044 | INFO     | collected zombie processes
[2025-11-27 14:15:11] 2025-11-27 19:14:16,044 | INFO     | will attempt to kill all subprocesses of pid=949861
[2025-11-27 14:15:11] 2025-11-27 19:14:16,788 | INFO     | process IDs to be killed: [949861] (in reverse order)
[2025-11-27 14:15:11] 2025-11-27 19:14:16,863 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:15:11] 2025-11-27 19:14:16,863 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:15:11] 2025-11-27 19:14:16,880 | INFO     | did not find any defunct processes belonging to 949861
[2025-11-27 14:15:11] 2025-11-27 19:14:16,888 | INFO     | did not find any defunct processes belonging to 949861
[2025-11-27 14:15:11] 2025-11-27 19:14:16,889 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:15:11] 2025-11-27 19:14:16,889 | INFO     | ready for new job
[2025-11-27 14:15:11] 2025-11-27 19:14:16,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:15:11] 2025-11-27 19:14:16,968 | INFO     | ***************************************
[2025-11-27 14:15:11] 2025-11-27 19:14:16,968 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:15:11] 2025-11-27 19:14:16,968 | INFO     | ***************************************
[2025-11-27 14:15:11] 2025-11-27 19:14:16,969 | INFO     | 
[2025-11-27 14:15:11] 2025-11-27 19:14:17,025 | INFO     | architecture information:
[2025-11-27 14:15:11] 2025-11-27 19:14:17,026 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:15:11] 2025-11-27 19:14:17,046 | INFO     | cat /etc/os-release:
[2025-11-27 14:15:11] NAME="CentOS Linux"
[2025-11-27 14:15:11] VERSION="7 (Core)"
[2025-11-27 14:15:11] ID="centos"
[2025-11-27 14:15:11] ID_LIKE="rhel fedora"
[2025-11-27 14:15:11] VERSION_ID="7"
[2025-11-27 14:15:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:15:11] ANSI_COLOR="0;31"
[2025-11-27 14:15:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:15:11] HOME_URL="https://www.centos.org/"
[2025-11-27 14:15:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:15:11] 
[2025-11-27 14:15:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:15:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:15:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:15:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:15:11] 
[2025-11-27 14:15:11] 2025-11-27 19:14:17,047 | INFO     | ***************************************
[2025-11-27 14:15:11] 2025-11-27 19:14:17,550 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 14:15:11] 2025-11-27 19:14:17,571 | INFO     | sufficient remaining disk space (50964987904 B)
[2025-11-27 14:15:11] 2025-11-27 19:14:17,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:15:11] 2025-11-27 19:14:17,574 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:15:11] 2025-11-27 19:14:17,574 | INFO     | update_server=False
[2025-11-27 14:15:11] 2025-11-27 19:14:17,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:15:11] 2025-11-27 19:14:17,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:15:11] 2025-11-27 19:14:17,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:15:11] 2025-11-27 19:14:17,890 | INFO     | aborting loop
[2025-11-27 14:15:11] 2025-11-27 19:14:18,032 | INFO     | all job control threads have been joined
[2025-11-27 14:15:11] 2025-11-27 19:14:18,332 | INFO     | all data control threads have been joined
[2025-11-27 14:15:11] 2025-11-27 19:14:18,581 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:18,633 | INFO     | all payload control threads have been joined
[2025-11-27 14:15:11] 2025-11-27 19:14:18,705 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:15:11] 2025-11-27 19:14:18,711 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:18,896 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,028 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,038 | INFO     | [job] control thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,338 | INFO     | [data] control thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,376 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,563 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,631 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,639 | INFO     | [payload] control thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,713 | INFO     | [job] validate thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,768 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:19,805 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:20,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:15:11] 2025-11-27 19:14:20,713 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:21,036 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:21,584 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:15:11] 2025-11-27 19:14:49,968 | INFO     | PID=937146 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 14:15:11] 2025-11-27 19:14:49,969 | INFO     | .. there are 7 such processes running
[2025-11-27 14:15:11] 2025-11-27 19:14:49,970 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:15:11] 2025-11-27 19:14:49,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:15:11] 2025-11-27 19:14:49,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:15:11] 2025-11-27 19:15:03,980 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:15:11] 2025-11-27 19:15:04,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140138591487808)>', '<ExcThread(monitor, started 140137669326592)>']
[2025-11-27 14:15:11] 2025-11-27 19:15:05,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:15:11] 2025-11-27 19:15:05,078 | INFO     | [monitor] control thread has ended
[2025-11-27 14:15:11] 2025-11-27 19:15:09,305 | INFO     | all workflow threads have been joined
[2025-11-27 14:15:11] 2025-11-27 19:15:09,305 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:15:11] 2025-11-27 19:15:09,306 | INFO     | traces error code: 0
[2025-11-27 14:15:11] 2025-11-27 19:15:09,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:15:11] 2025-11-27 19:15:10,826 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:15:11] 2025-11-27 19:15:10,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:15:11] 2025-11-27 19:15:10,835 [wrapper] pilotpid: 937146
[2025-11-27 14:15:11] 2025-11-27 19:15:10,837 [wrapper] Pilot exit status: 0
[2025-11-27 14:15:11] 2025-11-27 19:15:10,860 [wrapper] pandaids: 6895386447
[2025-11-27 14:15:11] 2025-11-27 19:15:10,919 [wrapper] cleanup supervisor_pilot 1079142 937147
[2025-11-27 14:15:11] 2025-11-27 19:15:10,922 [wrapper] Test setup, not cleaning
[2025-11-27 14:15:11] 2025-11-27 19:15:10,926 [wrapper] apfmon messages muted
[2025-11-27 14:15:11] 2025-11-27 19:15:10,928 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:15:11] 2025-11-27 19:15:10,931 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:15:11]  *** Error codes and diagnostics ***
[2025-11-27 14:15:11]     "exeErrorCode": 0,
[2025-11-27 14:15:11]     "exeErrorDiag": "",
[2025-11-27 14:15:11]     "pilotErrorCode": 0,
[2025-11-27 14:15:11]     "pilotErrorDiag": "",
[2025-11-27 14:15:11]  *** Listing of results directory ***
[2025-11-27 14:15:11] total 1334392
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-27 14:15:11] -rwx------. 1 boincer umatlas     36292 Nov 24 00:17 runpilot2-wrapper.sh
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:17 queuedata.json
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:15:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:05 run_atlas
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:05 job.xml
[2025-11-27 14:15:11] -rw-r--r--. 2 boincer umatlas 409564027 Nov 26 00:05 EVNT.47483658._001243.pool.root.1
[2025-11-27 14:15:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:05 start_atlas.sh
[2025-11-27 14:15:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:05 shared
[2025-11-27 14:15:11] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:05 input.tar.gz
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:05 boinc_lockfile
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:05 pandaJob.out
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas        57 Nov 26 00:05 setup.sh.local
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas    991877 Nov 26 00:06 agis_schedconf.cvmfs.json
[2025-11-27 14:15:11] drwx------. 5 boincer umatlas      4096 Nov 26 00:06 pilot3
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:55 boinc_task_state.xml
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas 912373663 Nov 27 14:12 HITS.47556149._002300.pool.root.1
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 14:13 init_data.xml
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas      1057 Nov 27 14:13 memory_monitor_summary.json
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas   3140033 Nov 27 14:14 log.47556149._002300.job.log.tgz.1
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas      8621 Nov 27 14:14 heartbeat.json
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas        95 Nov 27 14:14 pilot_heartbeat.json
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas      4822 Nov 27 14:15 pilotlog.txt
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas  17137849 Nov 27 14:15 log.47556149._002300.job.log.1
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:15 boinc_mmap_file
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas       353 Nov 27 14:15 output.list
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:15 wrapper_checkpoint.txt
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:15 runtime_log
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas  20295680 Nov 27 14:15 result.tar.gz
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas      9339 Nov 27 14:15 runtime_log.err
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas       662 Nov 27 14:15 M81MDm67dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXTLKDmcnNEun.diag
[2025-11-27 14:15:11] -rw-r--r--. 1 boincer umatlas     21593 Nov 27 14:15 stderr.txt
[2025-11-27 14:15:11] HITS file was successfully produced:
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas 912373663 Nov 27 14:12 shared/HITS.pool.root.1
[2025-11-27 14:15:11]  *** Contents of shared directory: ***
[2025-11-27 14:15:11] total 1311384
[2025-11-27 14:15:11] -rw-r--r--. 2 boincer umatlas 409564027 Nov 26 00:05 ATLAS.root_0
[2025-11-27 14:15:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:05 start_atlas.sh
[2025-11-27 14:15:11] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:05 input.tar.gz
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas 912373663 Nov 27 14:12 HITS.pool.root.1
[2025-11-27 14:15:11] -rw-------. 1 boincer umatlas  20295680 Nov 27 14:15 result.tar.gz
14:15:13 (932442): run_atlas exited; CPU time 294348.075972
14:15:13 (932442): called boinc_finish(0)

</stderr_txt>
]]>

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