Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:12 (1488388): wrapper (7.7.26015): starting
00:04:12 (1488388): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:04:12] Arguments: --nthreads 9
[2025-11-25 00:04:12] Threads: 9
[2025-11-25 00:04:12] Checking for CVMFS
[2025-11-25 00:04:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:04:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:04:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:04:13] 2.13.3.0 11836 26686 339544 153270 0 227 31436177 32935937 39574 16776704 0 112266336 99.536 124836025 35717 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:04:13] CVMFS is ok
[2025-11-25 00:04:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:04:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:04:13] Further information can be found at the LHC@home message board.
[2025-11-25 00:04:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:04:13] Checking for apptainer binary...
[2025-11-25 00:04:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:04:13] Running /usr/bin/apptainer --version
[2025-11-25 00:04:14] apptainer version 1.4.4-1.el9
[2025-11-25 00:04:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:04:14] c6-2-11-1.aglt2.org
[2025-11-25 00:04:14] apptainer works
[2025-11-25 00:04:14] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:04:14] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:04:14] Starting ATLAS job with PandaID=6895386417
[2025-11-25 00:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:17:20]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:17:20] 2025-11-25 23:16:11,183 | INFO     | monitor loop #2985: job 0:6895386417 is in state 'finished'
[2025-11-25 18:17:20] 2025-11-25 23:16:11,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:17:20] 2025-11-25 23:16:11,270 | INFO     | time since job start (65469s) is within the limit (172800.0s)
[2025-11-25 18:17:20] 2025-11-25 23:16:11,999 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 18:17:20] 2025-11-25 23:16:12,012 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2654.4921458333324
[2025-11-25 18:17:20] 2025-11-25 23:16:12,030 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6895386417/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,031 | INFO     | extracted standard info from prmon json
[2025-11-25 18:17:20] 2025-11-25 23:16:12,031 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:17:20] 2025-11-25 23:16:12,031 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:17:20] 2025-11-25 23:16:12,049 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:17:20] 2025-11-25 23:16:12,051 | INFO     | sum of square deviations: 381900380317.6264
[2025-11-25 18:17:20] 2025-11-25 23:16:12,074 | INFO     | sum of deviations: 2398497691667.987
[2025-11-25 18:17:20] 2025-11-25 23:16:12,074 | INFO     | mean x: 1764079885.5186567
[2025-11-25 18:17:20] 2025-11-25 23:16:12,074 | INFO     | mean y: 3019533.350746269
[2025-11-25 18:17:20] 2025-11-25 23:16:12,074 | INFO     | intersect: -11076156480.60186
[2025-11-25 18:17:20] 2025-11-25 23:16:12,076 | INFO     | chi2: 9.43430689296928
[2025-11-25 18:17:20] 2025-11-25 23:16:12,077 | INFO     | sum of square deviations: 376583080059.0401
[2025-11-25 18:17:20] 2025-11-25 23:16:12,100 | INFO     | sum of deviations: 2786954105643.9937
[2025-11-25 18:17:20] 2025-11-25 23:16:12,100 | INFO     | mean x: 1764079733.0609186
[2025-11-25 18:17:20] 2025-11-25 23:16:12,100 | INFO     | mean y: 3030670.2924086223
[2025-11-25 18:17:20] 2025-11-25 23:16:12,100 | INFO     | intersect: -13052280402.01254
[2025-11-25 18:17:20] 2025-11-25 23:16:12,101 | INFO     | chi2: 6.155624944063459
[2025-11-25 18:17:20] 2025-11-25 23:16:12,102 | INFO     | current chi2=6.155624944063459 (change=34.752759117356995 %)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,103 | INFO     | sum of square deviations: 371314889971.70374
[2025-11-25 18:17:20] 2025-11-25 23:16:12,125 | INFO     | sum of deviations: 2948745835977.1523
[2025-11-25 18:17:20] 2025-11-25 23:16:12,125 | INFO     | mean x: 1764079580.5960453
[2025-11-25 18:17:20] 2025-11-25 23:16:12,125 | INFO     | mean y: 3035348.9397363467
[2025-11-25 18:17:20] 2025-11-25 23:16:12,125 | INFO     | intersect: -14006158621.200588
[2025-11-25 18:17:20] 2025-11-25 23:16:12,127 | INFO     | chi2: 5.39910239127762
[2025-11-25 18:17:20] 2025-11-25 23:16:12,127 | INFO     | current chi2=5.39910239127762 (change=12.289939033979582 %)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,127 | INFO     | right removable region: 1061
[2025-11-25 18:17:20] 2025-11-25 23:16:12,128 | INFO     | sum of square deviations: 376577247866.1613
[2025-11-25 18:17:20] 2025-11-25 23:16:12,150 | INFO     | sum of deviations: 1965587511190.169
[2025-11-25 18:17:20] 2025-11-25 23:16:12,150 | INFO     | mean x: 1764080038.0599813
[2025-11-25 18:17:20] 2025-11-25 23:16:12,151 | INFO     | mean y: 3031936.2474226803
[2025-11-25 18:17:20] 2025-11-25 23:16:12,151 | INFO     | intersect: -9204783223.0554
[2025-11-25 18:17:20] 2025-11-25 23:16:12,152 | INFO     | chi2: 5.603073869193311
[2025-11-25 18:17:20] 2025-11-25 23:16:12,152 | INFO     | current chi2=5.603073869193311 (change=40.60958655723946 %)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,153 | INFO     | sum of square deviations: 371303939193.1183
[2025-11-25 18:17:20] 2025-11-25 23:16:12,175 | INFO     | sum of deviations: 1746211035762.3567
[2025-11-25 18:17:20] 2025-11-25 23:16:12,176 | INFO     | mean x: 1764080190.59887
[2025-11-25 18:17:20] 2025-11-25 23:16:12,176 | INFO     | mean y: 3038276.134651601
[2025-11-25 18:17:20] 2025-11-25 23:16:12,176 | INFO     | intersect: -8293281723.829953
[2025-11-25 18:17:20] 2025-11-25 23:16:12,177 | INFO     | chi2: 4.606849369131629
[2025-11-25 18:17:20] 2025-11-25 23:16:12,178 | INFO     | current chi2=4.606849369131629 (change=17.77996370062334 %)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,178 | INFO     | left removable region: 20
[2025-11-25 18:17:20] 2025-11-25 23:16:12,179 | INFO     | sum of square deviations: 349705844076.536
[2025-11-25 18:17:20] 2025-11-25 23:16:12,199 | INFO     | sum of deviations: 2115991695994.8044
[2025-11-25 18:17:20] 2025-11-25 23:16:12,200 | INFO     | mean x: 1764080160.2449567
[2025-11-25 18:17:20] 2025-11-25 23:16:12,200 | INFO     | mean y: 3060639.8674351587
[2025-11-25 18:17:20] 2025-11-25 23:16:12,200 | INFO     | intersect: -10670993092.361767
[2025-11-25 18:17:20] 2025-11-25 23:16:12,201 | INFO     | chi2: 0.279470016367846
[2025-11-25 18:17:20] 2025-11-25 23:16:12,201 | INFO     | current memory leak: 6.05 B/s (using 1041 data points, chi2=0.28)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,203 | INFO     | could have reported an average CPU frequency of 2663 MHz (39 samples)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,203 | INFO     | ..............................
[2025-11-25 18:17:20] 2025-11-25 23:16:12,203 | INFO     | . Timing measurements:
[2025-11-25 18:17:20] 2025-11-25 23:16:12,203 | INFO     | . get job = 0 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,203 | INFO     | . initial setup = 3 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,203 | INFO     | . payload setup = 38 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,204 | INFO     | . stage-in = 0 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,204 | INFO     | . payload execution = 65367 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,204 | INFO     | . stage-out = 3 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,204 | INFO     | . log creation = 0 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,204 | INFO     | ..............................
[2025-11-25 18:17:20] 2025-11-25 23:16:12,646 | INFO     | 
[2025-11-25 18:17:20] 2025-11-25 23:16:12,648 | INFO     | job summary report
[2025-11-25 18:17:20] 2025-11-25 23:16:12,648 | INFO     | --------------------------------------------------
[2025-11-25 18:17:20] 2025-11-25 23:16:12,648 | INFO     | PanDA job id: 6895386417
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | task id: 47556149
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | errors: (none)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | pilot state: finished 
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | transexitcode: 0
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | exeerrorcode: 0
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | exeerrordiag: 
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | exitcode: 0
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | exitmsg: OK
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | cpuconsumptiontime: 255794 s
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | nevents: 1000
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | neventsw: 0
[2025-11-25 18:17:20] 2025-11-25 23:16:12,649 | INFO     | pid: 1545491
[2025-11-25 18:17:20] 2025-11-25 23:16:12,650 | INFO     | pgrp: 1545491
[2025-11-25 18:17:20] 2025-11-25 23:16:12,650 | INFO     | corecount: 9
[2025-11-25 18:17:20] 2025-11-25 23:16:12,650 | INFO     | event service: False
[2025-11-25 18:17:20] 2025-11-25 23:16:12,650 | INFO     | sizes: {0: 2283482, 1: 2284167, 2: 2284366, 13: 2284366, 21: 2284684, 24: 2284712, 65409: 2337583, 65414: 2346582, 65417: 2346638, 65424: 2346884}
[2025-11-25 18:17:20] 2025-11-25 23:16:12,650 | INFO     | --------------------------------------------------
[2025-11-25 18:17:20] 2025-11-25 23:16:12,650 | INFO     | 
[2025-11-25 18:17:20] 2025-11-25 23:16:12,650 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:17:20] 2025-11-25 23:16:12,673 | INFO     | job 6895386417 has completed (purged errors)
[2025-11-25 18:17:20] 2025-11-25 23:16:12,673 | INFO     | overall cleanup function is called
[2025-11-25 18:17:20] 2025-11-25 23:16:13,694 | INFO     | --- collectZombieJob: --- 10, [1545491]
[2025-11-25 18:17:20] 2025-11-25 23:16:13,695 | INFO     | zombie collector waiting for pid 1545491
[2025-11-25 18:17:20] 2025-11-25 23:16:13,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:17:20] 2025-11-25 23:16:13,695 | INFO     | collected zombie processes
[2025-11-25 18:17:20] 2025-11-25 23:16:13,695 | INFO     | will attempt to kill all subprocesses of pid=1545491
[2025-11-25 18:17:20] 2025-11-25 23:16:14,246 | INFO     | process IDs to be killed: [1545491] (in reverse order)
[2025-11-25 18:17:20] 2025-11-25 23:16:14,408 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:17:20] 2025-11-25 23:16:14,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:17:20] 2025-11-25 23:16:14,430 | INFO     | did not find any defunct processes belonging to 1545491
[2025-11-25 18:17:20] 2025-11-25 23:16:14,451 | INFO     | did not find any defunct processes belonging to 1545491
[2025-11-25 18:17:20] 2025-11-25 23:16:14,452 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:17:20] 2025-11-25 23:16:14,453 | INFO     | ready for new job
[2025-11-25 18:17:20] 2025-11-25 23:16:14,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:17:20] 2025-11-25 23:16:14,474 | INFO     | ***************************************
[2025-11-25 18:17:20] 2025-11-25 23:16:14,474 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:17:20] 2025-11-25 23:16:14,474 | INFO     | ***************************************
[2025-11-25 18:17:20] 2025-11-25 23:16:14,474 | INFO     | 
[2025-11-25 18:17:20] 2025-11-25 23:16:14,485 | INFO     | architecture information:
[2025-11-25 18:17:20] 2025-11-25 23:16:14,486 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:17:20] 2025-11-25 23:16:14,510 | INFO     | cat /etc/os-release:
[2025-11-25 18:17:20] NAME="CentOS Linux"
[2025-11-25 18:17:20] VERSION="7 (Core)"
[2025-11-25 18:17:20] ID="centos"
[2025-11-25 18:17:20] ID_LIKE="rhel fedora"
[2025-11-25 18:17:20] VERSION_ID="7"
[2025-11-25 18:17:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:17:20] ANSI_COLOR="0;31"
[2025-11-25 18:17:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:17:20] HOME_URL="https://www.centos.org/"
[2025-11-25 18:17:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:17:20] 
[2025-11-25 18:17:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:17:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:17:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:17:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:17:20] 
[2025-11-25 18:17:20] 2025-11-25 23:16:14,511 | INFO     | ***************************************
[2025-11-25 18:17:20] 2025-11-25 23:16:15,013 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-25 18:17:20] 2025-11-25 23:16:15,039 | INFO     | sufficient remaining disk space (86015737856 B)
[2025-11-25 18:17:20] 2025-11-25 23:16:15,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:17:20] 2025-11-25 23:16:15,039 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:17:20] 2025-11-25 23:16:15,039 | INFO     | update_server=False
[2025-11-25 18:17:20] 2025-11-25 23:16:15,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:17:20] 2025-11-25 23:16:15,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:17:20] 2025-11-25 23:16:15,040 | INFO     | aborting loop
[2025-11-25 18:17:20] 2025-11-25 23:16:15,223 | INFO     | all data control threads have been joined
[2025-11-25 18:17:20] 2025-11-25 23:16:15,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:17:20] 2025-11-25 23:16:15,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:17:20] 2025-11-25 23:16:16,027 | INFO     | all job control threads have been joined
[2025-11-25 18:17:20] 2025-11-25 23:16:16,045 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,046 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,080 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,128 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,167 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,168 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,214 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,230 | INFO     | [data] control thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:16,245 | INFO     | all payload control threads have been joined
[2025-11-25 18:17:20] 2025-11-25 23:16:16,260 | INFO     | [job] validate thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:17,029 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:17,033 | INFO     | [job] control thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:17,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:17,251 | INFO     | [payload] control thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:17,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:17:20] 2025-11-25 23:16:17,395 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:18,327 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:19,651 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:17:20] 2025-11-25 23:16:45,144 | INFO     | PID=1506166 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 18:17:20] 2025-11-25 23:16:45,145 | INFO     | .. there are 54 such processes running
[2025-11-25 18:17:20] 2025-11-25 23:16:45,145 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:17:20] 2025-11-25 23:16:45,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:17:20] 2025-11-25 23:16:45,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:17:20] 2025-11-25 23:17:13,514 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:17:20] 2025-11-25 23:17:14,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342369023808)>', '<ExcThread(monitor, started 140341713811200)>']
[2025-11-25 18:17:20] 2025-11-25 23:17:15,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:17:20] 2025-11-25 23:17:15,312 | INFO     | [monitor] control thread has ended
[2025-11-25 18:17:20] 2025-11-25 23:17:19,545 | INFO     | all workflow threads have been joined
[2025-11-25 18:17:20] 2025-11-25 23:17:19,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:17:20] 2025-11-25 23:17:19,546 | INFO     | traces error code: 0
[2025-11-25 18:17:20] 2025-11-25 23:17:19,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:17:20] 2025-11-25 23:17:19,840 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:17:20] 2025-11-25 23:17:19,842 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:17:20] 2025-11-25 23:17:19,845 [wrapper] pilotpid: 1506166
[2025-11-25 18:17:20] 2025-11-25 23:17:19,848 [wrapper] Pilot exit status: 0
[2025-11-25 18:17:20] 2025-11-25 23:17:19,866 [wrapper] pandaids: 6895386417
[2025-11-25 18:17:20] 2025-11-25 23:17:19,971 [wrapper] cleanup supervisor_pilot 1970260 1506167
[2025-11-25 18:17:20] 2025-11-25 23:17:19,974 [wrapper] Test setup, not cleaning
[2025-11-25 18:17:20] 2025-11-25 23:17:19,978 [wrapper] apfmon messages muted
[2025-11-25 18:17:20] 2025-11-25 23:17:19,981 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:17:20] 2025-11-25 23:17:19,984 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:17:20]  *** Error codes and diagnostics ***
[2025-11-25 18:17:20]     "exeErrorCode": 0,
[2025-11-25 18:17:20]     "exeErrorDiag": "",
[2025-11-25 18:17:20]     "pilotErrorCode": 0,
[2025-11-25 18:17:20]     "pilotErrorDiag": "",
[2025-11-25 18:17:20]  *** Listing of results directory ***
[2025-11-25 18:17:20] total 1323252
[2025-11-25 18:17:20] -rwx------. 1 boincer umatlas     36292 Nov 24 00:14 runpilot2-wrapper.sh
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:14 queuedata.json
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:17:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:04 run_atlas
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:04 job.xml
[2025-11-25 18:17:20] -rw-r--r--. 2 boincer umatlas 409594712 Nov 25 00:04 EVNT.47483658._001240.pool.root.1
[2025-11-25 18:17:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:04 shared
[2025-11-25 18:17:20] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:04 input.tar.gz
[2025-11-25 18:17:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:04 boinc_lockfile
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:04 pandaJob.out
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas        57 Nov 25 00:04 setup.sh.local
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 18:17:20] drwx------. 5 boincer umatlas      4096 Nov 25 00:05 pilot3
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas       532 Nov 25 18:05 boinc_task_state.xml
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas      6878 Nov 25 18:09 init_data.xml
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas 923081641 Nov 25 18:15 HITS.47556149._002270.pool.root.1
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas      1059 Nov 25 18:15 memory_monitor_summary.json
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas   1516240 Nov 25 18:16 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas   2217915 Nov 25 18:16 log.47556149._002270.job.log.tgz.1
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas        95 Nov 25 18:16 pilot_heartbeat.json
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas      8620 Nov 25 18:16 heartbeat.json
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 18:17 boinc_mmap_file
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas      4824 Nov 25 18:17 pilotlog.txt
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas        29 Nov 25 18:17 wrapper_checkpoint.txt
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas   6983681 Nov 25 18:17 log.47556149._002270.job.log.1
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas       353 Nov 25 18:17 output.list
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas       620 Nov 25 18:17 runtime_log
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas   9226240 Nov 25 18:17 result.tar.gz
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 18:17 runtime_log.err
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas       661 Nov 25 18:17 qevMDmn5dh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9vIKDmp3Btgm.diag
[2025-11-25 18:17:20] -rw-r--r--. 1 boincer umatlas     21362 Nov 25 18:17 stderr.txt
[2025-11-25 18:17:20] HITS file was successfully produced:
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas 923081641 Nov 25 18:15 shared/HITS.pool.root.1
[2025-11-25 18:17:20]  *** Contents of shared directory: ***
[2025-11-25 18:17:20] total 1311060
[2025-11-25 18:17:20] -rw-r--r--. 2 boincer umatlas 409594712 Nov 25 00:04 ATLAS.root_0
[2025-11-25 18:17:20] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:04 input.tar.gz
[2025-11-25 18:17:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas 923081641 Nov 25 18:15 HITS.pool.root.1
[2025-11-25 18:17:20] -rw-------. 1 boincer umatlas   9226240 Nov 25 18:17 result.tar.gz
18:17:21 (1488388): run_atlas exited; CPU time 258486.453820
18:17:21 (1488388): called boinc_finish(0)

</stderr_txt>
]]>

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