Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:46:57 (1063672): wrapper (7.7.26015): starting
14:46:57 (1063672): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 14:46:57] Arguments: --nthreads 8
[2025-11-25 14:46:57] Threads: 8
[2025-11-25 14:46:57] Checking for CVMFS
[2025-11-25 14:46:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 14:46:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 14:46:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 14:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 14:47:00] 2.13.2.0 3240580 27872 177648 153295 3 426 32647222 40960000 13659 16776704 0 38332776 99.775 19267661 37597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 14:47:00] CVMFS is ok
[2025-11-25 14:47:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 14:47:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 14:47:00] Further information can be found at the LHC@home message board.
[2025-11-25 14:47:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 14:47:00] Checking for apptainer binary...
[2025-11-25 14:47:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 14:47:00] Running /usr/bin/apptainer --version
[2025-11-25 14:47:00] apptainer version 1.4.4-1.el9
[2025-11-25 14:47:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 14:47:01] c-210-37-4.aglt2.org
[2025-11-25 14:47:01] apptainer works
[2025-11-25 14:47:01] Set ATHENA_PROC_NUMBER=8
[2025-11-25 14:47:01] Set ATHENA_CORE_NUMBER=8
[2025-11-25 14:47:01] Starting ATLAS job with PandaID=6895385430
[2025-11-25 14:47:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 15:54:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 15:54:02] 2025-11-26 20:53:26,318 | INFO     | monitor loop #5534: job 0:6895385430 is in state 'finished'
[2025-11-26 15:54:02] 2025-11-26 20:53:26,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 15:54:02] 2025-11-26 20:53:27,881 | INFO     | time since job start (90318s) is within the limit (172800.0s)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,022 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 15:54:02] 2025-11-26 20:53:28,059 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2663.3868392857144
[2025-11-26 15:54:02] 2025-11-26 20:53:28,069 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895385430/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,069 | INFO     | extracted standard info from prmon json
[2025-11-26 15:54:02] 2025-11-26 20:53:28,070 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 15:54:02] 2025-11-26 20:53:28,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 15:54:02] 2025-11-26 20:53:28,089 | INFO     | fitting pss+swap vs Time
[2025-11-26 15:54:02] 2025-11-26 20:53:28,091 | INFO     | sum of square deviations: 1003128268308.9196
[2025-11-26 15:54:02] 2025-11-26 20:53:28,129 | INFO     | sum of deviations: 5601778829282.94
[2025-11-26 15:54:02] 2025-11-26 20:53:28,129 | INFO     | mean x: 1764145267.4320488
[2025-11-26 15:54:02] 2025-11-26 20:53:28,129 | INFO     | mean y: 2984703.899932387
[2025-11-26 15:54:02] 2025-11-26 20:53:28,129 | INFO     | intersect: -9848548667.341091
[2025-11-26 15:54:02] 2025-11-26 20:53:28,130 | INFO     | chi2: 9.847009069915789
[2025-11-26 15:54:02] 2025-11-26 20:53:28,132 | INFO     | sum of square deviations: 992989840262.3264
[2025-11-26 15:54:02] 2025-11-26 20:53:28,163 | INFO     | sum of deviations: 6143379894839.378
[2025-11-26 15:54:02] 2025-11-26 20:53:28,163 | INFO     | mean x: 1764145114.9436905
[2025-11-26 15:54:02] 2025-11-26 20:53:28,163 | INFO     | mean y: 2992850.1852103123
[2025-11-26 15:54:02] 2025-11-26 20:53:28,163 | INFO     | intersect: -10911331940.752283
[2025-11-26 15:54:02] 2025-11-26 20:53:28,164 | INFO     | chi2: 6.356169000675914
[2025-11-26 15:54:02] 2025-11-26 20:53:28,164 | INFO     | current chi2=6.356169000675914 (change=35.450765247134356 %)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,166 | INFO     | sum of square deviations: 982919343007.6722
[2025-11-26 15:54:02] 2025-11-26 20:53:28,197 | INFO     | sum of deviations: 6436423043391.399
[2025-11-26 15:54:02] 2025-11-26 20:53:28,198 | INFO     | mean x: 1764144962.4506466
[2025-11-26 15:54:02] 2025-11-26 20:53:28,198 | INFO     | mean y: 2997283.5779441795
[2025-11-26 15:54:02] 2025-11-26 20:53:28,198 | INFO     | intersect: -11549103475.224161
[2025-11-26 15:54:02] 2025-11-26 20:53:28,199 | INFO     | chi2: 4.943879097515194
[2025-11-26 15:54:02] 2025-11-26 20:53:28,199 | INFO     | current chi2=4.943879097515194 (change=22.219200008850258 %)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,200 | INFO     | right removable region: 1468
[2025-11-26 15:54:02] 2025-11-26 20:53:28,201 | INFO     | sum of square deviations: 992986743902.3276
[2025-11-26 15:54:02] 2025-11-26 20:53:28,232 | INFO     | sum of deviations: 5030200219886.366
[2025-11-26 15:54:02] 2025-11-26 20:53:28,232 | INFO     | mean x: 1764145419.9436905
[2025-11-26 15:54:02] 2025-11-26 20:53:28,232 | INFO     | mean y: 2993297.775440977
[2025-11-26 15:54:02] 2025-11-26 20:53:28,232 | INFO     | intersect: -8933686606.367514
[2025-11-26 15:54:02] 2025-11-26 20:53:28,233 | INFO     | chi2: 6.321697236031244
[2025-11-26 15:54:02] 2025-11-26 20:53:28,234 | INFO     | current chi2=6.321697236031244 (change=35.80083869989462 %)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,235 | INFO     | sum of square deviations: 982914228513.8674
[2025-11-26 15:54:02] 2025-11-26 20:53:28,264 | INFO     | sum of deviations: 4838709844882.531
[2025-11-26 15:54:02] 2025-11-26 20:53:28,265 | INFO     | mean x: 1764145572.4520082
[2025-11-26 15:54:02] 2025-11-26 20:53:28,265 | INFO     | mean y: 2996195.0428863172
[2025-11-26 15:54:02] 2025-11-26 20:53:28,265 | INFO     | intersect: -8681574952.264528
[2025-11-26 15:54:02] 2025-11-26 20:53:28,266 | INFO     | chi2: 5.962842655124979
[2025-11-26 15:54:02] 2025-11-26 20:53:28,266 | INFO     | current chi2=5.962842655124979 (change=5.676554373103022 %)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,266 | INFO     | left removable region: 20
[2025-11-26 15:54:02] 2025-11-26 20:53:28,267 | INFO     | sum of square deviations: 941359431100.419
[2025-11-26 15:54:02] 2025-11-26 20:53:28,300 | INFO     | sum of deviations: 5474221100540.241
[2025-11-26 15:54:02] 2025-11-26 20:53:28,300 | INFO     | mean x: 1764145541.9799724
[2025-11-26 15:54:02] 2025-11-26 20:53:28,300 | INFO     | mean y: 3012894.560082873
[2025-11-26 15:54:02] 2025-11-26 20:53:28,300 | INFO     | intersect: -10255898241.053297
[2025-11-26 15:54:02] 2025-11-26 20:53:28,301 | INFO     | chi2: 0.8675514230212077
[2025-11-26 15:54:02] 2025-11-26 20:53:28,302 | INFO     | current memory leak: 5.82 B/s (using 1448 data points, chi2=0.87)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | could have reported an average CPU frequency of 2884 MHz (52 samples)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | ..............................
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . Timing measurements:
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . get job = 0 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . initial setup = 3 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . payload setup = 23 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . stage-in = 0 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . payload execution = 90207 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . stage-out = 7 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,303 | INFO     | . log creation = 2 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,304 | INFO     | ..............................
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | 
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | job summary report
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | --------------------------------------------------
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | PanDA job id: 6895385430
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | task id: 47556149
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | errors: (none)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | pilot state: finished 
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | transexitcode: 0
[2025-11-26 15:54:02] 2025-11-26 20:53:28,750 | INFO     | exeerrorcode: 0
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | exeerrordiag: 
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | exitcode: 0
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | exitmsg: OK
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | cpuconsumptiontime: 242464 s
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | nevents: 1000
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | neventsw: 0
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | pid: 1092773
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | pgrp: 1092773
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | corecount: 8
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | event service: False
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 23: 2284371, 26: 2284661, 34: 2284689, 90236: 2352509, 90237: 2352508, 90245: 2361558, 90247: 2361614, 90266: 2361860}
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | --------------------------------------------------
[2025-11-26 15:54:02] 2025-11-26 20:53:28,751 | INFO     | 
[2025-11-26 15:54:02] 2025-11-26 20:53:28,752 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 15:54:02] 2025-11-26 20:53:28,871 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,871 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 15:54:02] 2025-11-26 20:53:28,873 | INFO     | job 6895385430 has completed (purged errors)
[2025-11-26 15:54:02] 2025-11-26 20:53:28,873 | INFO     | overall cleanup function is called
[2025-11-26 15:54:02] 2025-11-26 20:53:29,890 | INFO     | --- collectZombieJob: --- 10, [1092773]
[2025-11-26 15:54:02] 2025-11-26 20:53:29,890 | INFO     | zombie collector waiting for pid 1092773
[2025-11-26 15:54:02] 2025-11-26 20:53:29,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 15:54:02] 2025-11-26 20:53:29,890 | INFO     | collected zombie processes
[2025-11-26 15:54:02] 2025-11-26 20:53:29,890 | INFO     | will attempt to kill all subprocesses of pid=1092773
[2025-11-26 15:54:02] 2025-11-26 20:53:31,001 | INFO     | process IDs to be killed: [1092773] (in reverse order)
[2025-11-26 15:54:02] 2025-11-26 20:53:31,421 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 15:54:02] 2025-11-26 20:53:31,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 15:54:02] 2025-11-26 20:53:31,430 | INFO     | did not find any defunct processes belonging to 1092773
[2025-11-26 15:54:02] 2025-11-26 20:53:31,438 | INFO     | did not find any defunct processes belonging to 1092773
[2025-11-26 15:54:02] 2025-11-26 20:53:31,439 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 15:54:02] 2025-11-26 20:53:31,439 | INFO     | ready for new job
[2025-11-26 15:54:02] 2025-11-26 20:53:31,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 15:54:02] 2025-11-26 20:53:31,446 | INFO     | ***************************************
[2025-11-26 15:54:02] 2025-11-26 20:53:31,447 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 15:54:02] 2025-11-26 20:53:31,447 | INFO     | ***************************************
[2025-11-26 15:54:02] 2025-11-26 20:53:31,447 | INFO     | 
[2025-11-26 15:54:02] 2025-11-26 20:53:31,451 | INFO     | architecture information:
[2025-11-26 15:54:02] 2025-11-26 20:53:31,451 | INFO     | executing command: cat /etc/os-release
[2025-11-26 15:54:02] 2025-11-26 20:53:31,513 | INFO     | cat /etc/os-release:
[2025-11-26 15:54:02] NAME="CentOS Linux"
[2025-11-26 15:54:02] VERSION="7 (Core)"
[2025-11-26 15:54:02] ID="centos"
[2025-11-26 15:54:02] ID_LIKE="rhel fedora"
[2025-11-26 15:54:02] VERSION_ID="7"
[2025-11-26 15:54:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 15:54:02] ANSI_COLOR="0;31"
[2025-11-26 15:54:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 15:54:02] HOME_URL="https://www.centos.org/"
[2025-11-26 15:54:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 15:54:02] 
[2025-11-26 15:54:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 15:54:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 15:54:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 15:54:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 15:54:02] 
[2025-11-26 15:54:02] 2025-11-26 20:53:31,513 | INFO     | ***************************************
[2025-11-26 15:54:02] 2025-11-26 20:53:32,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 15:54:02] 2025-11-26 20:53:32,223 | INFO     | sufficient remaining disk space (67245178880 B)
[2025-11-26 15:54:02] 2025-11-26 20:53:32,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 15:54:02] 2025-11-26 20:53:32,224 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 15:54:02] 2025-11-26 20:53:32,224 | INFO     | update_server=False
[2025-11-26 15:54:02] 2025-11-26 20:53:32,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 15:54:02] 2025-11-26 20:53:32,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:54:02] 2025-11-26 20:53:32,374 | INFO     | aborting loop
[2025-11-26 15:54:02] 2025-11-26 20:53:32,770 | INFO     | all payload control threads have been joined
[2025-11-26 15:54:02] 2025-11-26 20:53:33,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 15:54:02] 2025-11-26 20:53:33,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 15:54:02] 2025-11-26 20:53:33,181 | INFO     | all job control threads have been joined
[2025-11-26 15:54:02] 2025-11-26 20:53:33,230 | INFO     | [job] retrieve thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:33,271 | INFO     | all data control threads have been joined
[2025-11-26 15:54:02] 2025-11-26 20:53:33,313 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:33,323 | INFO     | [data] copytool_in thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:33,380 | INFO     | [job] job monitor thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:33,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 15:54:02] 2025-11-26 20:53:33,801 | INFO     | [payload] control thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:33,902 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,187 | INFO     | [job] control thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,193 | INFO     | [payload] failed_post thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,196 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,196 | INFO     | [job] validate thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,277 | INFO     | [data] control thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,446 | INFO     | [job] queue monitor thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,498 | INFO     | [payload] validate_post thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:34,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:35,014 | INFO     | [data] copytool_out thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:37,019 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 15:54:02] 2025-11-26 20:53:55,066 | INFO     | [monitor] cgroup control has ended
[2025-11-26 15:54:02] 2025-11-26 20:53:56,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686254634816)>', '<ExcThread(monitor, started 139685590447872)>']
[2025-11-26 15:54:02] 2025-11-26 20:54:01,622 | INFO     | PID=1080960 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 15:54:02] 2025-11-26 20:54:01,622 | INFO     | .. there are 12 such processes running
[2025-11-26 15:54:02] 2025-11-26 20:54:01,623 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 15:54:02] 2025-11-26 20:54:01,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 15:54:02] 2025-11-26 20:54:01,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 15:54:02] 2025-11-26 20:54:01,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 15:54:02] 2025-11-26 20:54:01,623 | INFO     | [monitor] control thread has ended
[2025-11-26 15:54:02] 2025-11-26 20:54:01,724 | INFO     | all workflow threads have been joined
[2025-11-26 15:54:02] 2025-11-26 20:54:01,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 15:54:02] 2025-11-26 20:54:01,724 | INFO     | traces error code: 0
[2025-11-26 15:54:02] 2025-11-26 20:54:01,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 15:54:02] 2025-11-26 20:54:02,035 [wrapper] ==== pilot stdout END ====
[2025-11-26 15:54:02] 2025-11-26 20:54:02,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 15:54:02] 2025-11-26 20:54:02,068 [wrapper] pilotpid: 1080960
[2025-11-26 15:54:02] 2025-11-26 20:54:02,070 [wrapper] Pilot exit status: 0
[2025-11-26 15:54:02] 2025-11-26 20:54:02,111 [wrapper] pandaids: 6895385430
[2025-11-26 15:54:02] 2025-11-26 20:54:02,214 [wrapper] cleanup supervisor_pilot 3518627 1080961
[2025-11-26 15:54:02] 2025-11-26 20:54:02,217 [wrapper] Test setup, not cleaning
[2025-11-26 15:54:02] 2025-11-26 20:54:02,220 [wrapper] apfmon messages muted
[2025-11-26 15:54:02] 2025-11-26 20:54:02,223 [wrapper] ==== wrapper stdout END ====
[2025-11-26 15:54:02] 2025-11-26 20:54:02,226 [wrapper] ==== wrapper stderr END ====
[2025-11-26 15:54:02]  *** Error codes and diagnostics ***
[2025-11-26 15:54:02]     "exeErrorCode": 0,
[2025-11-26 15:54:02]     "exeErrorDiag": "",
[2025-11-26 15:54:02]     "pilotErrorCode": 0,
[2025-11-26 15:54:02]     "pilotErrorDiag": "",
[2025-11-26 15:54:02]  *** Listing of results directory ***
[2025-11-26 15:54:02] total 1328972
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-26 15:54:02] -rwx------. 1 boincer umatlas     36292 Nov 24 00:12 runpilot2-wrapper.sh
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:12 queuedata.json
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas       100 Nov 25 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 15:54:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 14:46 run_atlas
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas       105 Nov 25 14:46 job.xml
[2025-11-26 15:54:02] -rw-r--r--. 2 boincer umatlas 407272048 Nov 25 14:46 EVNT.47483658._001236.pool.root.1
[2025-11-26 15:54:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:46 start_atlas.sh
[2025-11-26 15:54:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 14:46 shared
[2025-11-26 15:54:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 14:46 input.tar.gz
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas         0 Nov 25 14:46 boinc_lockfile
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 14:47 pandaJob.out
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas        57 Nov 25 14:47 setup.sh.local
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas    991893 Nov 25 14:48 agis_schedconf.cvmfs.json
[2025-11-26 15:54:02] drwx------. 5 boincer umatlas      4096 Nov 25 14:48 pilot3
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas       533 Nov 26 15:40 boinc_task_state.xml
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas      6844 Nov 26 15:47 init_data.xml
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas 921658987 Nov 26 15:52 HITS.47556149._002223.pool.root.1
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas      1062 Nov 26 15:52 memory_monitor_summary.json
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas   1516240 Nov 26 15:53 agis_ddmendpoints.agis.ALL.json
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas   2477822 Nov 26 15:53 log.47556149._002223.job.log.tgz.1
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas        95 Nov 26 15:53 pilot_heartbeat.json
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas      8626 Nov 26 15:53 heartbeat.json
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 15:53 boinc_mmap_file
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas        29 Nov 26 15:53 wrapper_checkpoint.txt
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas      4824 Nov 26 15:54 pilotlog.txt
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas  11530690 Nov 26 15:54 log.47556149._002223.job.log.1
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas       353 Nov 26 15:54 output.list
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas       620 Nov 26 15:54 runtime_log
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas  14028800 Nov 26 15:54 result.tar.gz
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 15:54 runtime_log.err
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas       662 Nov 26 15:54 qjOMDmA3dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrSLKDmKGzDmm.diag
[2025-11-26 15:54:02] -rw-r--r--. 1 boincer umatlas     21383 Nov 26 15:54 stderr.txt
[2025-11-26 15:54:02] HITS file was successfully produced:
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas 921658987 Nov 26 15:52 shared/HITS.pool.root.1
[2025-11-26 15:54:02]  *** Contents of shared directory: ***
[2025-11-26 15:54:02] total 1312088
[2025-11-26 15:54:02] -rw-r--r--. 2 boincer umatlas 407272048 Nov 25 14:46 ATLAS.root_0
[2025-11-26 15:54:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 14:46 start_atlas.sh
[2025-11-26 15:54:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 14:46 input.tar.gz
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas 921658987 Nov 26 15:52 HITS.pool.root.1
[2025-11-26 15:54:02] -rw-------. 1 boincer umatlas  14028800 Nov 26 15:54 result.tar.gz
15:54:03 (1063672): run_atlas exited; CPU time 243761.050266
15:54:03 (1063672): called boinc_finish(0)

</stderr_txt>
]]>

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