Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:18 (156078): wrapper (7.7.26015): starting
23:38:18 (156078): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 23:38:18] Arguments: --nthreads 9
[2025-11-25 23:38:18] Threads: 9
[2025-11-25 23:38:18] Checking for CVMFS
[2025-11-25 23:38:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:38:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:38:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:38:20] 2.13.3.0 11066 29581 328116 153309 2 211 31116850 32935937 21833 16776704 0 84347854 99.441 119013314 38547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 23:38:20] CVMFS is ok
[2025-11-25 23:38:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:38:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:38:20] Further information can be found at the LHC@home message board.
[2025-11-25 23:38:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:38:20] Checking for apptainer binary...
[2025-11-25 23:38:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:38:20] Running /usr/bin/apptainer --version
[2025-11-25 23:38:20] apptainer version 1.4.4-1.el9
[2025-11-25 23:38:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:38:20] c6-1-24-4.aglt2.org
[2025-11-25 23:38:20] apptainer works
[2025-11-25 23:38:20] Set ATHENA_PROC_NUMBER=9
[2025-11-25 23:38:20] Set ATHENA_CORE_NUMBER=9
[2025-11-25 23:38:20] Starting ATLAS job with PandaID=6895385456
[2025-11-25 23:38:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:40:27 (2110594): wrapper (7.7.26015): starting
10:40:27 (2110594): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 10:40:27] Arguments: --nthreads 9
[2025-11-26 10:40:27] Threads: 9
[2025-11-26 10:40:27] This job has been restarted, cleaning up previous attempt
[2025-11-26 10:40:28] Checking for CVMFS
[2025-11-26 10:40:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:40:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:40:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:40:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:40:28] 2.13.3.0 11066 30244 328764 153326 2 98 23165144 32935936 18949 16776704 0 86320646 99.443 121004911 38450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 10:40:28] CVMFS is ok
[2025-11-26 10:40:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:40:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:40:28] Further information can be found at the LHC@home message board.
[2025-11-26 10:40:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:40:28] Checking for apptainer binary...
[2025-11-26 10:40:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:40:28] Running /usr/bin/apptainer --version
[2025-11-26 10:40:28] apptainer version 1.4.4-1.el9
[2025-11-26 10:40:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:40:28] c6-1-24-4.aglt2.org
[2025-11-26 10:40:28] apptainer works
[2025-11-26 10:40:28] Set ATHENA_PROC_NUMBER=9
[2025-11-26 10:40:28] Set ATHENA_CORE_NUMBER=9
[2025-11-26 10:40:28] Starting ATLAS job with PandaID=6895385456
[2025-11-26 10:40:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:46:37 (3761877): wrapper (7.7.26015): starting
17:46:37 (3761877): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 17:46:37] Arguments: --nthreads 10
[2025-11-26 17:46:37] Threads: 10
[2025-11-26 17:46:37] This job has been restarted, cleaning up previous attempt
[2025-11-26 17:46:37] Checking for CVMFS
[2025-11-26 17:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:46:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:46:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:46:38] 2.13.3.0 11066 30670 346740 153337 0 712 25108750 32935937 19643 16776704 0 88472465 99.430 128562296 38925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:46:38] CVMFS is ok
[2025-11-26 17:46:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:46:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:46:38] Further information can be found at the LHC@home message board.
[2025-11-26 17:46:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:46:38] Checking for apptainer binary...
[2025-11-26 17:46:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:46:38] Running /usr/bin/apptainer --version
[2025-11-26 17:46:38] apptainer version 1.4.4-1.el9
[2025-11-26 17:46:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:46:38] c6-1-24-4.aglt2.org
[2025-11-26 17:46:38] apptainer works
[2025-11-26 17:46:38] Set ATHENA_PROC_NUMBER=10
[2025-11-26 17:46:38] Set ATHENA_CORE_NUMBER=10
[2025-11-26 17:46:38] Starting ATLAS job with PandaID=6895385456
[2025-11-26 17:46:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:10 (3761877): BOINC client no longer exists - exiting
00:20:10 (3761877): timer handler: client dead, exiting
00:28:05 (1116159): wrapper (7.7.26015): starting
00:28:05 (1116159): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:28:05] Arguments: --nthreads 9
[2025-11-27 00:28:05] Threads: 9
[2025-11-27 00:28:05] This job has been restarted, cleaning up previous attempt
[2025-11-27 00:28:06] Checking for CVMFS
[2025-11-27 00:28:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:28:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:28:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:28:07] 2.13.3.0 11066 31071 338432 153349 0 313 32223268 32935936 22867 16776704 0 90375147 99.436 130342729 38898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:28:07] CVMFS is ok
[2025-11-27 00:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:28:07] Further information can be found at the LHC@home message board.
[2025-11-27 00:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:28:07] Checking for apptainer binary...
[2025-11-27 00:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:28:07] Running /usr/bin/apptainer --version
[2025-11-27 00:28:07] apptainer version 1.4.4-1.el9
[2025-11-27 00:28:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:28:08] c6-1-24-4.aglt2.org
[2025-11-27 00:28:08] apptainer works
[2025-11-27 00:28:08] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:28:08] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:28:08] Starting ATLAS job with PandaID=6895385456
[2025-11-27 00:28:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:59:43]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:59:43] 2025-11-28 00:58:32,746 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 19:59:43] 2025-11-28 00:58:32,750 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2981.323410714286
[2025-11-27 19:59:43] 2025-11-28 00:58:32,761 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895385456/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:59:43] 2025-11-28 00:58:32,762 | INFO     | extracted standard info from prmon json
[2025-11-27 19:59:43] 2025-11-28 00:58:32,762 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:59:43] 2025-11-28 00:58:32,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:59:43] 2025-11-28 00:58:32,784 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:59:43] 2025-11-28 00:58:32,786 | INFO     | sum of square deviations: 471592991265.6525
[2025-11-27 19:59:43] 2025-11-28 00:58:32,826 | INFO     | sum of deviations: 4311681874080.8813
[2025-11-27 19:59:43] 2025-11-28 00:58:32,826 | INFO     | mean x: 1764256415.5826087
[2025-11-27 19:59:43] 2025-11-28 00:58:32,826 | INFO     | mean y: 2937924.6539130434
[2025-11-27 19:59:43] 2025-11-28 00:58:32,827 | INFO     | intersect: -16127311144.322176
[2025-11-27 19:59:43] 2025-11-28 00:58:32,828 | INFO     | chi2: 6.867368011095082
[2025-11-27 19:59:43] 2025-11-28 00:58:32,829 | INFO     | sum of square deviations: 465468800337.267
[2025-11-27 19:59:43] 2025-11-28 00:58:32,879 | INFO     | sum of deviations: 4722959060540.922
[2025-11-27 19:59:43] 2025-11-28 00:58:32,880 | INFO     | mean x: 1764256263.0873363
[2025-11-27 19:59:43] 2025-11-28 00:58:32,880 | INFO     | mean y: 2948165.580786026
[2025-11-27 19:59:43] 2025-11-28 00:58:32,880 | INFO     | intersect: -17898380767.37213
[2025-11-27 19:59:43] 2025-11-28 00:58:32,881 | INFO     | chi2: 3.4380437881237187
[2025-11-27 19:59:43] 2025-11-28 00:58:32,881 | INFO     | current chi2=3.4380437881237187 (change=49.93651450498744 %)
[2025-11-27 19:59:43] 2025-11-28 00:58:32,887 | INFO     | sum of square deviations: 459397866221.329
[2025-11-27 19:59:43] 2025-11-28 00:58:32,914 | INFO     | sum of deviations: 4832175123813.132
[2025-11-27 19:59:43] 2025-11-28 00:58:32,914 | INFO     | mean x: 1764256110.5921052
[2025-11-27 19:59:43] 2025-11-28 00:58:32,914 | INFO     | mean y: 2950904.3701754385
[2025-11-27 19:59:43] 2025-11-28 00:58:32,914 | INFO     | intersect: -18554371879.38696
[2025-11-27 19:59:43] 2025-11-28 00:58:32,915 | INFO     | chi2: 2.918886139819769
[2025-11-27 19:59:43] 2025-11-28 00:58:32,915 | INFO     | current chi2=2.918886139819769 (change=15.100379177755475 %)
[2025-11-27 19:59:43] 2025-11-28 00:58:32,916 | INFO     | right removable region: 1139
[2025-11-27 19:59:43] 2025-11-28 00:58:32,917 | INFO     | sum of square deviations: 465468040887.26715
[2025-11-27 19:59:43] 2025-11-28 00:58:32,939 | INFO     | sum of deviations: 3938235108774.899
[2025-11-27 19:59:43] 2025-11-28 00:58:32,939 | INFO     | mean x: 1764256568.0873363
[2025-11-27 19:59:43] 2025-11-28 00:58:32,939 | INFO     | mean y: 2947216.7310043667
[2025-11-27 19:59:43] 2025-11-28 00:58:32,939 | INFO     | intersect: -14924086536.40056
[2025-11-27 19:59:43] 2025-11-28 00:58:32,940 | INFO     | chi2: 4.225828947189668
[2025-11-27 19:59:43] 2025-11-28 00:58:32,941 | INFO     | current chi2=4.225828947189668 (change=38.465086764502516 %)
[2025-11-27 19:59:43] 2025-11-28 00:58:32,942 | INFO     | sum of square deviations: 459396906206.74677
[2025-11-27 19:59:43] 2025-11-28 00:58:32,964 | INFO     | sum of deviations: 3834546215862.0
[2025-11-27 19:59:43] 2025-11-28 00:58:32,964 | INFO     | mean x: 1764256720.5850878
[2025-11-27 19:59:43] 2025-11-28 00:58:32,965 | INFO     | mean y: 2949821.0
[2025-11-27 19:59:43] 2025-11-28 00:58:32,965 | INFO     | intersect: -14723148331.441797
[2025-11-27 19:59:43] 2025-11-28 00:58:32,966 | INFO     | chi2: 4.168568466643914
[2025-11-27 19:59:43] 2025-11-28 00:58:32,966 | INFO     | current chi2=4.168568466643914 (change=1.3550117920374902 %)
[2025-11-27 19:59:43] 2025-11-28 00:58:32,966 | INFO     | left removable region: 20
[2025-11-27 19:59:43] 2025-11-28 00:58:32,967 | INFO     | sum of square deviations: 434475228308.59125
[2025-11-27 19:59:43] 2025-11-28 00:58:32,989 | INFO     | sum of deviations: 4172384259544.6626
[2025-11-27 19:59:43] 2025-11-28 00:58:32,989 | INFO     | mean x: 1764256690.0866845
[2025-11-27 19:59:43] 2025-11-28 00:58:32,989 | INFO     | mean y: 2967795.024128686
[2025-11-27 19:59:43] 2025-11-28 00:58:32,989 | INFO     | intersect: -16939670965.236097
[2025-11-27 19:59:43] 2025-11-28 00:58:32,991 | INFO     | chi2: 0.12017179224050588
[2025-11-27 19:59:43] 2025-11-28 00:58:32,991 | INFO     | current memory leak: 9.60 B/s (using 1119 data points, chi2=0.12)
[2025-11-27 19:59:43] 2025-11-28 00:58:32,992 | INFO     | could have reported an average CPU frequency of 2860 MHz (42 samples)
[2025-11-27 19:59:43] 2025-11-28 00:58:32,992 | INFO     | ..............................
[2025-11-27 19:59:43] 2025-11-28 00:58:32,992 | INFO     | . Timing measurements:
[2025-11-27 19:59:43] 2025-11-28 00:58:32,992 | INFO     | . get job = 0 s
[2025-11-27 19:59:43] 2025-11-28 00:58:32,992 | INFO     | . initial setup = 3 s
[2025-11-27 19:59:43] 2025-11-28 00:58:32,992 | INFO     | . payload setup = 16 s
[2025-11-27 19:59:43] 2025-11-28 00:58:32,993 | INFO     | . stage-in = 0 s
[2025-11-27 19:59:43] 2025-11-28 00:58:32,993 | INFO     | . payload execution = 70134 s
[2025-11-27 19:59:43] 2025-11-28 00:58:32,993 | INFO     | . stage-out = 5 s
[2025-11-27 19:59:43] 2025-11-28 00:58:32,993 | INFO     | . log creation = 1 s
[2025-11-27 19:59:43] 2025-11-28 00:58:32,993 | INFO     | ..............................
[2025-11-27 19:59:43] 2025-11-28 00:58:33,213 | INFO     | 
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | job summary report
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | --------------------------------------------------
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | PanDA job id: 6895385456
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | task id: 47556149
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | errors: (none)
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | pilot state: finished 
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | transexitcode: 0
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | exeerrorcode: 0
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | exeerrordiag: 
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | exitcode: 0
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | exitmsg: OK
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | cpuconsumptiontime: 243271 s
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | nevents: 1000
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | neventsw: 0
[2025-11-27 19:59:43] 2025-11-28 00:58:33,214 | INFO     | pid: 1169679
[2025-11-27 19:59:43] 2025-11-28 00:58:33,215 | INFO     | pgrp: 1169679
[2025-11-27 19:59:43] 2025-11-28 00:58:33,215 | INFO     | corecount: 9
[2025-11-27 19:59:43] 2025-11-28 00:58:33,215 | INFO     | event service: False
[2025-11-27 19:59:43] 2025-11-28 00:58:33,215 | INFO     | sizes: {0: 2284144, 1: 2284343, 10: 2284605, 12: 2284633, 70155: 2342179, 70161: 2351173, 70165: 2351357, 70181: 2351603}
[2025-11-27 19:59:43] 2025-11-28 00:58:33,215 | INFO     | --------------------------------------------------
[2025-11-27 19:59:43] 2025-11-28 00:58:33,215 | INFO     | 
[2025-11-27 19:59:43] 2025-11-28 00:58:33,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 19:59:43] 2025-11-28 00:58:33,287 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,287 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,288 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:59:43] 2025-11-28 00:58:33,289 | INFO     | job 6895385456 has completed (purged errors)
[2025-11-27 19:59:43] 2025-11-28 00:58:33,289 | INFO     | overall cleanup function is called
[2025-11-27 19:59:43] 2025-11-28 00:58:34,316 | INFO     | --- collectZombieJob: --- 10, [1169679]
[2025-11-27 19:59:43] 2025-11-28 00:58:34,316 | INFO     | zombie collector waiting for pid 1169679
[2025-11-27 19:59:43] 2025-11-28 00:58:34,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:59:43] 2025-11-28 00:58:34,317 | INFO     | collected zombie processes
[2025-11-27 19:59:43] 2025-11-28 00:58:34,317 | INFO     | will attempt to kill all subprocesses of pid=1169679
[2025-11-27 19:59:43] 2025-11-28 00:58:34,985 | INFO     | process IDs to be killed: [1169679] (in reverse order)
[2025-11-27 19:59:43] 2025-11-28 00:58:35,340 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:59:43] 2025-11-28 00:58:35,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:59:43] 2025-11-28 00:58:35,364 | INFO     | did not find any defunct processes belonging to 1169679
[2025-11-27 19:59:43] 2025-11-28 00:58:35,378 | INFO     | did not find any defunct processes belonging to 1169679
[2025-11-27 19:59:43] 2025-11-28 00:58:35,380 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:59:43] 2025-11-28 00:58:35,380 | INFO     | ready for new job
[2025-11-27 19:59:43] 2025-11-28 00:58:35,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:59:43] 2025-11-28 00:58:35,384 | INFO     | ***************************************
[2025-11-27 19:59:43] 2025-11-28 00:58:35,385 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:59:43] 2025-11-28 00:58:35,385 | INFO     | ***************************************
[2025-11-27 19:59:43] 2025-11-28 00:58:35,385 | INFO     | 
[2025-11-27 19:59:43] 2025-11-28 00:58:35,388 | INFO     | architecture information:
[2025-11-27 19:59:43] 2025-11-28 00:58:35,388 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:59:43] 2025-11-28 00:58:35,426 | INFO     | cat /etc/os-release:
[2025-11-27 19:59:43] NAME="CentOS Linux"
[2025-11-27 19:59:43] VERSION="7 (Core)"
[2025-11-27 19:59:43] ID="centos"
[2025-11-27 19:59:43] ID_LIKE="rhel fedora"
[2025-11-27 19:59:43] VERSION_ID="7"
[2025-11-27 19:59:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:59:43] ANSI_COLOR="0;31"
[2025-11-27 19:59:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:59:43] HOME_URL="https://www.centos.org/"
[2025-11-27 19:59:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:59:43] 
[2025-11-27 19:59:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:59:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:59:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:59:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:59:43] 
[2025-11-27 19:59:43] 2025-11-28 00:58:35,426 | INFO     | ***************************************
[2025-11-27 19:59:43] 2025-11-28 00:58:35,929 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 19:59:43] 2025-11-28 00:58:36,002 | INFO     | sufficient remaining disk space (71449968640 B)
[2025-11-27 19:59:43] 2025-11-28 00:58:36,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:59:43] 2025-11-28 00:58:36,002 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:59:43] 2025-11-28 00:58:36,002 | INFO     | update_server=False
[2025-11-27 19:59:43] 2025-11-28 00:58:36,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:59:43] 2025-11-28 00:58:36,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:59:43] 2025-11-28 00:58:36,373 | INFO     | all job control threads have been joined
[2025-11-27 19:59:43] 2025-11-28 00:58:36,411 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:59:43] 2025-11-28 00:58:36,479 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 19:59:43] 2025-11-28 00:58:36,480 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 19:59:43] 2025-11-28 00:58:36,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:59:43] 2025-11-28 00:58:36,480 | INFO     | will abort loop
[2025-11-27 19:59:43] 2025-11-28 00:58:37,002 | INFO     | all data control threads have been joined
[2025-11-27 19:59:43] 2025-11-28 00:58:37,008 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:37,083 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:37,162 | INFO     | all payload control threads have been joined
[2025-11-27 19:59:43] 2025-11-28 00:58:37,379 | INFO     | [job] control thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:37,467 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:37,485 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:37,938 [wrapper] supervise_pilot (15 min periods counter: 79)
[2025-11-27 19:59:43] 2025-11-28 00:58:38,001 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,009 | INFO     | [data] control thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,096 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:59:43] 2025-11-28 00:58:38,107 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,168 | INFO     | [payload] control thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,297 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,345 | INFO     | [job] validate thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:38,429 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:39,105 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:58:40,422 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:59:43] 2025-11-28 00:59:05,849 | INFO     | PID=1135692 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:59:43] 2025-11-28 00:59:05,849 | INFO     | .. there are 32 such processes running
[2025-11-27 19:59:43] 2025-11-28 00:59:05,849 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:59:43] 2025-11-28 00:59:05,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:59:43] 2025-11-28 00:59:05,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:59:43] 2025-11-28 00:59:35,548 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:59:43] 2025-11-28 00:59:37,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622611674944)>', '<ExcThread(monitor, started 140622077859584)>']
[2025-11-27 19:59:43] 2025-11-28 00:59:38,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:59:43] 2025-11-28 00:59:38,108 | INFO     | [monitor] control thread has ended
[2025-11-27 19:59:43] 2025-11-28 00:59:42,330 | INFO     | all workflow threads have been joined
[2025-11-27 19:59:43] 2025-11-28 00:59:42,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:59:43] 2025-11-28 00:59:42,331 | INFO     | traces error code: 0
[2025-11-27 19:59:43] 2025-11-28 00:59:42,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:59:43] 2025-11-28 00:59:42,579 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:59:43] 2025-11-28 00:59:42,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:59:43] 2025-11-28 00:59:42,634 [wrapper] pilotpid: 1135692
[2025-11-27 19:59:43] 2025-11-28 00:59:42,657 [wrapper] Pilot exit status: 0
[2025-11-27 19:59:43] 2025-11-28 00:59:42,721 [wrapper] pandaids: 6895385456 6895385456 6895385456 6895385456
[2025-11-27 19:59:43] 2025-11-28 00:59:42,828 [wrapper] cleanup supervisor_pilot 1035119 1135693
[2025-11-27 19:59:43] 2025-11-28 00:59:42,863 [wrapper] Test setup, not cleaning
[2025-11-27 19:59:43] 2025-11-28 00:59:42,866 [wrapper] apfmon messages muted
[2025-11-27 19:59:43] 2025-11-28 00:59:42,868 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:59:43] 2025-11-28 00:59:42,871 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:59:43]  *** Error codes and diagnostics ***
[2025-11-27 19:59:43]     "exeErrorCode": 0,
[2025-11-27 19:59:43]     "exeErrorDiag": "",
[2025-11-27 19:59:43]     "pilotErrorCode": 0,
[2025-11-27 19:59:43]     "pilotErrorDiag": "",
[2025-11-27 19:59:43]  *** Listing of results directory ***
[2025-11-27 19:59:43] total 1715264
[2025-11-27 19:59:43] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-27 19:59:43] -rwx------. 1 boincer umatlas     36292 Nov 24 00:17 runpilot2-wrapper.sh
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:17 queuedata.json
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:59:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:38 run_atlas
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:38 job.xml
[2025-11-27 19:59:43] -rw-r--r--. 3 boincer umatlas 407524044 Nov 25 23:38 EVNT.47483658._001238.pool.root.1
[2025-11-27 19:59:43] -rw-r--r--. 3 boincer umatlas 407524044 Nov 25 23:38 ATLAS.root_0
[2025-11-27 19:59:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:38 shared
[2025-11-27 19:59:43] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 23:38 input.tar.gz
[2025-11-27 19:59:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:38 start_atlas.sh
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:38 boinc_lockfile
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 00:28 pandaJob.out
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas        57 Nov 27 00:28 setup.sh.local
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas    991578 Nov 27 00:28 agis_schedconf.cvmfs.json
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas       534 Nov 27 19:46 boinc_task_state.xml
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas 914118894 Nov 27 19:57 HITS.47556149._002249.pool.root.1
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas      1069 Nov 27 19:58 memory_monitor_summary.json
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas   2381896 Nov 27 19:58 log.47556149._002249.job.log.tgz.1
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas        96 Nov 27 19:58 pilot_heartbeat.json
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas      6846 Nov 27 19:58 init_data.xml
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas      7982 Nov 27 19:58 heartbeat.json
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas        30 Nov 27 19:59 wrapper_checkpoint.txt
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:59 boinc_mmap_file
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas      5010 Nov 27 19:59 pilotlog.txt
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas   9283645 Nov 27 19:59 log.47556149._002249.job.log.1
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas       353 Nov 27 19:59 output.list
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:59 runtime_log
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas  11683840 Nov 27 19:59 result.tar.gz
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas      9433 Nov 27 19:59 runtime_log.err
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas      1040 Nov 27 19:59 4ZrMDm67dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOTLKDmNPJa3n.diag
[2025-11-27 19:59:43] -rw-r--r--. 1 boincer umatlas     27907 Nov 27 19:59 stderr.txt
[2025-11-27 19:59:43] HITS file was successfully produced:
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas 914118894 Nov 27 19:57 shared/HITS.pool.root.1
[2025-11-27 19:59:43]  *** Contents of shared directory: ***
[2025-11-27 19:59:43] total 1302688
[2025-11-27 19:59:43] -rw-r--r--. 3 boincer umatlas 407524044 Nov 25 23:38 ATLAS.root_0
[2025-11-27 19:59:43] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 23:38 input.tar.gz
[2025-11-27 19:59:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:38 start_atlas.sh
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas 914118894 Nov 27 19:57 HITS.pool.root.1
[2025-11-27 19:59:43] -rw-------. 1 boincer umatlas  11683840 Nov 27 19:59 result.tar.gz
19:59:45 (1116159): run_atlas exited; CPU time 244997.107123
19:59:45 (1116159): called boinc_finish(0)

</stderr_txt>
]]>

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