Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:33 (1385249): wrapper (7.7.26015): starting
00:03:33 (1385249): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:03:33] Arguments: --nthreads 12
[2025-11-25 00:03:33] Threads: 12
[2025-11-25 00:03:33] Checking for CVMFS
[2025-11-25 00:03:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:35] 2.13.3.0 44796 28024 364112 153270 1 380 30960995 32947200 32131 16776704 0 110371964 99.486 144202191 35072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:35] CVMFS is ok
[2025-11-25 00:03:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:35] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:35] Checking for apptainer binary...
[2025-11-25 00:03:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:35] Running /usr/bin/apptainer --version
[2025-11-25 00:03:35] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:36] c6-6-8-2.aglt2.org
[2025-11-25 00:03:36] apptainer works
[2025-11-25 00:03:36] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:03:36] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:03:36] Starting ATLAS job with PandaID=6895386440
[2025-11-25 00:03:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:01:08]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:01:08] 2025-11-26 17:00:16,944 | INFO     | time since job start (129322s) is within the limit (172800.0s)
[2025-11-26 12:01:08] 2025-11-26 17:00:17,346 | INFO     | monitor loop #6551: job 0:6895386440 is in state 'finished'
[2025-11-26 12:01:08] 2025-11-26 17:00:17,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:01:08] 2025-11-26 17:00:18,951 | INFO     | time since job start (129324s) is within the limit (172800.0s)
[2025-11-26 12:01:08] 2025-11-26 17:00:19,854 | INFO     | monitor loop #6552: job 0:6895386440 is in state 'finished'
[2025-11-26 12:01:08] 2025-11-26 17:00:19,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:01:08] 2025-11-26 17:00:20,959 | INFO     | time since job start (129326s) is within the limit (172800.0s)
[2025-11-26 12:01:08] 2025-11-26 17:00:22,361 | INFO     | monitor loop #6553: job 0:6895386440 is in state 'finished'
[2025-11-26 12:01:08] 2025-11-26 17:00:22,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:01:08] 2025-11-26 17:00:22,968 | INFO     | time since job start (129328s) is within the limit (172800.0s)
[2025-11-26 12:01:08] 2025-11-26 17:00:24,866 | INFO     | monitor loop #6554: job 0:6895386440 is in state 'finished'
[2025-11-26 12:01:08] 2025-11-26 17:00:24,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:01:08] 2025-11-26 17:00:24,989 | INFO     | time since job start (129330s) is within the limit (172800.0s)
[2025-11-26 12:01:08] 2025-11-26 17:00:26,995 | INFO     | time since job start (129332s) is within the limit (172800.0s)
[2025-11-26 12:01:08] 2025-11-26 17:00:27,390 | INFO     | monitor loop #6555: job 0:6895386440 is in state 'finished'
[2025-11-26 12:01:08] 2025-11-26 17:00:27,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:01:08] 2025-11-26 17:00:27,597 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 12:01:08] 2025-11-26 17:00:27,685 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2589.0246770833323
[2025-11-26 12:01:08] 2025-11-26 17:00:27,778 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895386440/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:01:08] 2025-11-26 17:00:27,779 | INFO     | extracted standard info from prmon json
[2025-11-26 12:01:08] 2025-11-26 17:00:27,779 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:01:08] 2025-11-26 17:00:27,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:01:08] 2025-11-26 17:00:27,948 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:01:08] 2025-11-26 17:00:27,964 | INFO     | sum of square deviations: 2941757995209.7163
[2025-11-26 12:01:08] 2025-11-26 17:00:28,391 | INFO     | sum of deviations: 16725056955224.426
[2025-11-26 12:01:08] 2025-11-26 17:00:28,391 | INFO     | mean x: 1764111801.2432687
[2025-11-26 12:01:08] 2025-11-26 17:00:28,391 | INFO     | mean y: 3452071.9933868684
[2025-11-26 12:01:08] 2025-11-26 17:00:28,391 | INFO     | intersect: -10026220796.822538
[2025-11-26 12:01:08] 2025-11-26 17:00:28,402 | INFO     | chi2: 21.918852302042968
[2025-11-26 12:01:08] 2025-11-26 17:00:28,414 | INFO     | sum of square deviations: 2920966412126.7715
[2025-11-26 12:01:08] 2025-11-26 17:00:28,713 | INFO     | sum of deviations: 17605967786209.29
[2025-11-26 12:01:08] 2025-11-26 17:00:28,714 | INFO     | mean x: 1764111648.7604167
[2025-11-26 12:01:08] 2025-11-26 17:00:28,714 | INFO     | mean y: 3458531.8484848486
[2025-11-26 12:01:08] 2025-11-26 17:00:28,714 | INFO     | intersect: -10629629452.459526
[2025-11-26 12:01:08] 2025-11-26 17:00:28,725 | INFO     | chi2: 18.504797048412303
[2025-11-26 12:01:08] 2025-11-26 17:00:28,725 | INFO     | current chi2=18.504797048412303 (change=15.575885117454138 %)
[2025-11-26 12:01:08] 2025-11-26 17:00:28,725 | INFO     | right removable region: 2111
[2025-11-26 12:01:08] 2025-11-26 17:00:28,728 | INFO     | sum of square deviations: 2920956412624.151
[2025-11-26 12:01:08] 2025-11-26 17:00:29,054 | INFO     | time since job start (129335s) is within the limit (172800.0s)
[2025-11-26 12:01:08] 2025-11-26 17:00:29,056 | INFO     | sum of deviations: 15690757501587.332
[2025-11-26 12:01:08] 2025-11-26 17:00:29,057 | INFO     | mean x: 1764111953.762784
[2025-11-26 12:01:08] 2025-11-26 17:00:29,057 | INFO     | mean y: 3459655.0146780303
[2025-11-26 12:01:08] 2025-11-26 17:00:29,057 | INFO     | intersect: -9472975101.940731
[2025-11-26 12:01:08] 2025-11-26 17:00:29,063 | INFO     | chi2: 17.655144526776322
[2025-11-26 12:01:08] 2025-11-26 17:00:29,064 | INFO     | current chi2=17.655144526776322 (change=19.45224009228459 %)
[2025-11-26 12:01:08] 2025-11-26 17:00:29,064 | INFO     | left removable region: 10
[2025-11-26 12:01:08] 2025-11-26 17:00:29,075 | INFO     | sum of square deviations: 2875550391633.8677
[2025-11-26 12:01:08] 2025-11-26 17:00:29,350 | INFO     | sum of deviations: 15823544890245.787
[2025-11-26 12:01:08] 2025-11-26 17:00:29,350 | INFO     | mean x: 1764111923.303189
[2025-11-26 12:01:08] 2025-11-26 17:00:29,351 | INFO     | mean y: 3474140.238933841
[2025-11-26 12:01:08] 2025-11-26 17:00:29,351 | INFO     | intersect: -9704060212.49589
[2025-11-26 12:01:08] 2025-11-26 17:00:29,362 | INFO     | chi2: 10.387154948538821
[2025-11-26 12:01:08] 2025-11-26 17:00:29,363 | INFO     | current memory leak: 5.50 B/s (using 2101 data points, chi2=10.39)
[2025-11-26 12:01:08] 2025-11-26 17:00:29,365 | INFO     | could have reported an average CPU frequency of 2606 MHz (74 samples)
[2025-11-26 12:01:08] 2025-11-26 17:00:29,365 | INFO     | ..............................
[2025-11-26 12:01:08] 2025-11-26 17:00:29,365 | INFO     | . Timing measurements:
[2025-11-26 12:01:08] 2025-11-26 17:00:29,365 | INFO     | . get job = 0 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,374 | INFO     | . initial setup = 9 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,375 | INFO     | . payload setup = 53 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,375 | INFO     | . stage-in = 0 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,375 | INFO     | . payload execution = 129159 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,375 | INFO     | . stage-out = 11 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,375 | INFO     | . log creation = 5 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,375 | INFO     | ..............................
[2025-11-26 12:01:08] 2025-11-26 17:00:29,673 | INFO     | 
[2025-11-26 12:01:08] 2025-11-26 17:00:29,673 | INFO     | job summary report
[2025-11-26 12:01:08] 2025-11-26 17:00:29,673 | INFO     | --------------------------------------------------
[2025-11-26 12:01:08] 2025-11-26 17:00:29,673 | INFO     | PanDA job id: 6895386440
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | task id: 47556149
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | errors: (none)
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | pilot state: finished 
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | transexitcode: 0
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | exeerrorcode: 0
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | exeerrordiag: 
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | exitcode: 0
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | exitmsg: OK
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | cpuconsumptiontime: 275628 s
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | nevents: 1000
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | neventsw: 0
[2025-11-26 12:01:08] 2025-11-26 17:00:29,674 | INFO     | pid: 1422689
[2025-11-26 12:01:08] 2025-11-26 17:00:29,675 | INFO     | pgrp: 1422689
[2025-11-26 12:01:08] 2025-11-26 17:00:29,675 | INFO     | corecount: 12
[2025-11-26 12:01:08] 2025-11-26 17:00:29,675 | INFO     | event service: False
[2025-11-26 12:01:08] 2025-11-26 17:00:29,675 | INFO     | sizes: {0: 2284032, 1: 2284287, 2: 2284287, 3: 2284315, 14: 2284343, 25: 2284371, 35: 2284789, 36: 2284817, 129214: 2367009, 129228: 2376008, 129229: 2376064, 1292
[2025-11-26 12:01:08] 2025-11-26 17:00:29,675 | INFO     | --------------------------------------------------
[2025-11-26 12:01:08] 2025-11-26 17:00:29,675 | INFO     | 
[2025-11-26 12:01:08] 2025-11-26 17:00:29,675 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 12:01:08] 2025-11-26 17:00:29,728 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:01:08] 2025-11-26 17:00:29,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:01:08] 2025-11-26 17:00:29,730 | INFO     | job 6895386440 has completed (purged errors)
[2025-11-26 12:01:08] 2025-11-26 17:00:29,730 | INFO     | overall cleanup function is called
[2025-11-26 12:01:08] 2025-11-26 17:00:30,755 | INFO     | --- collectZombieJob: --- 10, [1422689]
[2025-11-26 12:01:08] 2025-11-26 17:00:30,755 | INFO     | zombie collector waiting for pid 1422689
[2025-11-26 12:01:08] 2025-11-26 17:00:30,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:01:08] 2025-11-26 17:00:30,755 | INFO     | collected zombie processes
[2025-11-26 12:01:08] 2025-11-26 17:00:30,756 | INFO     | will attempt to kill all subprocesses of pid=1422689
[2025-11-26 12:01:08] 2025-11-26 17:00:31,535 | INFO     | process IDs to be killed: [1422689] (in reverse order)
[2025-11-26 12:01:08] 2025-11-26 17:00:32,740 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:01:08] 2025-11-26 17:00:32,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:01:08] 2025-11-26 17:00:32,760 | INFO     | did not find any defunct processes belonging to 1422689
[2025-11-26 12:01:08] 2025-11-26 17:00:32,779 | INFO     | did not find any defunct processes belonging to 1422689
[2025-11-26 12:01:08] 2025-11-26 17:00:32,780 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:01:08] 2025-11-26 17:00:32,780 | INFO     | ready for new job
[2025-11-26 12:01:08] 2025-11-26 17:00:32,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:01:08] 2025-11-26 17:00:32,789 | INFO     | ***************************************
[2025-11-26 12:01:08] 2025-11-26 17:00:32,789 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:01:08] 2025-11-26 17:00:32,789 | INFO     | ***************************************
[2025-11-26 12:01:08] 2025-11-26 17:00:32,789 | INFO     | 
[2025-11-26 12:01:08] 2025-11-26 17:00:32,795 | INFO     | architecture information:
[2025-11-26 12:01:08] 2025-11-26 17:00:32,796 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:01:08] 2025-11-26 17:00:32,840 | INFO     | cat /etc/os-release:
[2025-11-26 12:01:08] NAME="CentOS Linux"
[2025-11-26 12:01:08] VERSION="7 (Core)"
[2025-11-26 12:01:08] ID="centos"
[2025-11-26 12:01:08] ID_LIKE="rhel fedora"
[2025-11-26 12:01:08] VERSION_ID="7"
[2025-11-26 12:01:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:01:08] ANSI_COLOR="0;31"
[2025-11-26 12:01:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:01:08] HOME_URL="https://www.centos.org/"
[2025-11-26 12:01:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:01:08] 
[2025-11-26 12:01:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:01:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:01:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:01:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:01:08] 
[2025-11-26 12:01:08] 2025-11-26 17:00:32,840 | INFO     | ***************************************
[2025-11-26 12:01:08] 2025-11-26 17:00:33,344 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 12:01:08] 2025-11-26 17:00:33,436 | INFO     | sufficient remaining disk space (65029537792 B)
[2025-11-26 12:01:08] 2025-11-26 17:00:33,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:01:08] 2025-11-26 17:00:33,437 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:01:08] 2025-11-26 17:00:33,437 | INFO     | update_server=False
[2025-11-26 12:01:08] 2025-11-26 17:00:33,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:01:08] 2025-11-26 17:00:33,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:01:08] 2025-11-26 17:00:33,455 | INFO     | aborting loop
[2025-11-26 12:01:08] 2025-11-26 17:00:34,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:01:08] 2025-11-26 17:00:34,205 | INFO     | all data control threads have been joined
[2025-11-26 12:01:08] 2025-11-26 17:00:34,228 | INFO     | all payload control threads have been joined
[2025-11-26 12:01:08] 2025-11-26 17:00:34,454 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:34,461 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:34,641 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:34,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:01:08] 2025-11-26 17:00:34,695 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:34,747 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:34,747 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:34,852 | INFO     | all job control threads have been joined
[2025-11-26 12:01:08] 2025-11-26 17:00:34,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:01:08] 2025-11-26 17:00:35,014 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:35,211 | INFO     | [data] control thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:35,256 | INFO     | [payload] control thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:35,446 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:35,690 | INFO     | [job] validate thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:35,695 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:35,766 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:35,858 | INFO     | [job] control thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:36,181 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:00:38,917 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:01:08] 2025-11-26 17:01:01,080 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:01:08] 2025-11-26 17:01:02,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533505996608)>', '<ExcThread(monitor, started 140532688852736)>']
[2025-11-26 12:01:08] 2025-11-26 17:01:03,446 | INFO     | PID=1396987 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:01:08] 2025-11-26 17:01:03,446 | INFO     | .. there are 33 such processes running
[2025-11-26 12:01:08] 2025-11-26 17:01:03,446 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:01:08] 2025-11-26 17:01:03,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:01:08] 2025-11-26 17:01:03,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:01:08] 2025-11-26 17:01:03,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:01:08] 2025-11-26 17:01:03,447 | INFO     | [monitor] control thread has ended
[2025-11-26 12:01:08] 2025-11-26 17:01:07,112 | INFO     | all workflow threads have been joined
[2025-11-26 12:01:08] 2025-11-26 17:01:07,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:01:08] 2025-11-26 17:01:07,113 | INFO     | traces error code: 0
[2025-11-26 12:01:08] 2025-11-26 17:01:07,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:01:08] 2025-11-26 17:01:07,317 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:01:08] 2025-11-26 17:01:07,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:01:08] 2025-11-26 17:01:07,322 [wrapper] pilotpid: 1396987
[2025-11-26 12:01:08] 2025-11-26 17:01:07,324 [wrapper] Pilot exit status: 0
[2025-11-26 12:01:08] 2025-11-26 17:01:07,395 [wrapper] pandaids: 6895386440
[2025-11-26 12:01:08] 2025-11-26 17:01:07,678 [wrapper] cleanup supervisor_pilot 4189326 1396988
[2025-11-26 12:01:08] 2025-11-26 17:01:07,692 [wrapper] Test setup, not cleaning
[2025-11-26 12:01:08] 2025-11-26 17:01:07,711 [wrapper] apfmon messages muted
[2025-11-26 12:01:08] 2025-11-26 17:01:07,722 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:01:08] 2025-11-26 17:01:07,734 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:01:08]  *** Error codes and diagnostics ***
[2025-11-26 12:01:08]     "exeErrorCode": 0,
[2025-11-26 12:01:08]     "exeErrorDiag": "",
[2025-11-26 12:01:08]     "pilotErrorCode": 0,
[2025-11-26 12:01:08]     "pilotErrorDiag": "",
[2025-11-26 12:01:08]  *** Listing of results directory ***
[2025-11-26 12:01:08] total 1343628
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-26 12:01:08] -rwx------ 1 boincer umatlas     36292 Nov 24 00:19 runpilot2-wrapper.sh
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 00:19 queuedata.json
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:01:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-26 12:01:08] -rw-r--r-- 2 boincer umatlas 409564027 Nov 25 00:03 EVNT.47483658._001243.pool.root.1
[2025-11-26 12:01:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-26 12:01:08] drwxrwx--x 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-26 12:01:08] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 00:03 input.tar.gz
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 00:03 pandaJob.out
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-26 12:01:08] drwx------ 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas       533 Nov 26 11:32 boinc_task_state.xml
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas      6878 Nov 26 11:55 init_data.xml
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas 926358444 Nov 26 11:58 HITS.47556149._002293.pool.root.1
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas      1071 Nov 26 11:59 memory_monitor_summary.json
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas   1516240 Nov 26 11:59 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas   3290984 Nov 26 11:59 log.47556149._002293.job.log.tgz.1
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas        95 Nov 26 12:00 pilot_heartbeat.json
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas      8653 Nov 26 12:00 heartbeat.json
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas        29 Nov 26 12:01 wrapper_checkpoint.txt
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 12:01 boinc_mmap_file
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas      4824 Nov 26 12:01 pilotlog.txt
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas  14721731 Nov 26 12:01 log.47556149._002293.job.log.1
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas       353 Nov 26 12:01 output.list
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas       620 Nov 26 12:01 runtime_log
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas  18032640 Nov 26 12:01 result.tar.gz
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas      9346 Nov 26 12:01 runtime_log.err
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas       667 Nov 26 12:01 jS1NDm49dh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNwIKDmsQlIen.diag
[2025-11-26 12:01:08] -rw-r--r-- 1 boincer umatlas     21840 Nov 26 12:01 stderr.txt
[2025-11-26 12:01:08] HITS file was successfully produced:
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas 926358444 Nov 26 11:58 shared/HITS.pool.root.1
[2025-11-26 12:01:08]  *** Contents of shared directory: ***
[2025-11-26 12:01:08] total 1322832
[2025-11-26 12:01:08] -rw-r--r-- 2 boincer umatlas 409564027 Nov 25 00:03 ATLAS.root_0
[2025-11-26 12:01:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-26 12:01:08] -rw-r--r-- 2 boincer umatlas    590100 Nov 25 00:03 input.tar.gz
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas 926358444 Nov 26 11:58 HITS.pool.root.1
[2025-11-26 12:01:08] -rw------- 1 boincer umatlas  18032640 Nov 26 12:01 result.tar.gz
12:01:10 (1385249): run_atlas exited; CPU time 279526.756848
12:01:10 (1385249): called boinc_finish(0)

</stderr_txt>
]]>

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