Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:30:24 (1250592): wrapper (7.7.26015): starting
20:30:24 (1250592): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:30:24] Arguments: --nthreads 8
[2025-11-25 20:30:24] Threads: 8
[2025-11-25 20:30:24] Checking for CVMFS
[2025-11-25 20:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:30:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:30:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:30:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:30:26] 2.13.3.0 4306 26314 325880 153304 1 96 16778650 32935936 26230 16776704 0 147471281 99.788 80121706 31881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:30:26] CVMFS is ok
[2025-11-25 20:30:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:30:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:30:26] Further information can be found at the LHC@home message board.
[2025-11-25 20:30:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:30:26] Checking for apptainer binary...
[2025-11-25 20:30:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:30:26] Running /usr/bin/apptainer --version
[2025-11-25 20:30:26] apptainer version 1.4.4-1.el9
[2025-11-25 20:30:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:30:26] c-6-4.aglt2.org
[2025-11-25 20:30:26] apptainer works
[2025-11-25 20:30:26] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:30:26] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:30:26] Starting ATLAS job with PandaID=6895385442
[2025-11-25 20:30:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:19:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:19:22] 2025-11-26 23:18:00,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:19:22] 2025-11-26 23:18:01,653 | INFO     | PID=1254804 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 18:19:22] 2025-11-26 23:18:01,654 | INFO     | .. there are 42 such processes running
[2025-11-26 18:19:22] 2025-11-26 23:18:02,656 | INFO     | time since job start (78427s) is within the limit (172800.0s)
[2025-11-26 18:19:22] 2025-11-26 23:18:03,377 | INFO     | monitor loop #4737: job 0:6895385442 is in state 'finished'
[2025-11-26 18:19:22] 2025-11-26 23:18:03,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:19:22] 2025-11-26 23:18:04,663 | INFO     | time since job start (78429s) is within the limit (172800.0s)
[2025-11-26 18:19:22] 2025-11-26 23:18:05,894 | INFO     | monitor loop #4738: job 0:6895385442 is in state 'finished'
[2025-11-26 18:19:22] 2025-11-26 23:18:05,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:19:22] 2025-11-26 23:18:06,669 | INFO     | time since job start (78431s) is within the limit (172800.0s)
[2025-11-26 18:19:22] 2025-11-26 23:18:08,405 | INFO     | monitor loop #4739: job 0:6895385442 is in state 'finished'
[2025-11-26 18:19:22] 2025-11-26 23:18:08,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:19:22] 2025-11-26 23:18:08,678 | INFO     | time since job start (78433s) is within the limit (172800.0s)
[2025-11-26 18:19:22] 2025-11-26 23:18:10,688 | INFO     | time since job start (78435s) is within the limit (172800.0s)
[2025-11-26 18:19:22] 2025-11-26 23:18:10,911 | INFO     | monitor loop #4740: job 0:6895385442 is in state 'finished'
[2025-11-26 18:19:22] 2025-11-26 23:18:10,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,151 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 18:19:22] 2025-11-26 23:18:12,162 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8047
[2025-11-26 18:19:22] 2025-11-26 23:18:12,177 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895385442/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,182 | INFO     | extracted standard info from prmon json
[2025-11-26 18:19:22] 2025-11-26 23:18:12,182 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:19:22] 2025-11-26 23:18:12,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:19:22] 2025-11-26 23:18:12,231 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:19:22] 2025-11-26 23:18:12,237 | INFO     | sum of square deviations: 657935363331.0242
[2025-11-26 18:19:22] 2025-11-26 23:18:12,295 | INFO     | sum of deviations: 2354427487191.1187
[2025-11-26 18:19:22] 2025-11-26 23:18:12,295 | INFO     | mean x: 1764159888.2350194
[2025-11-26 18:19:22] 2025-11-26 23:18:12,295 | INFO     | mean y: 2961560.1750972765
[2025-11-26 18:19:22] 2025-11-26 23:18:12,295 | INFO     | intersect: -6310100123.622503
[2025-11-26 18:19:22] 2025-11-26 23:18:12,297 | INFO     | chi2: 14.208634198358517
[2025-11-26 18:19:22] 2025-11-26 23:18:12,299 | INFO     | sum of square deviations: 650285434148.3678
[2025-11-26 18:19:22] 2025-11-26 23:18:12,341 | INFO     | sum of deviations: 2802897637605.552
[2025-11-26 18:19:22] 2025-11-26 23:18:12,342 | INFO     | mean x: 1764159735.7398438
[2025-11-26 18:19:22] 2025-11-26 23:18:12,342 | INFO     | mean y: 2970498.44609375
[2025-11-26 18:19:22] 2025-11-26 23:18:12,342 | INFO     | intersect: -7601012146.713165
[2025-11-26 18:19:22] 2025-11-26 23:18:12,344 | INFO     | chi2: 10.897351157181076
[2025-11-26 18:19:22] 2025-11-26 23:18:12,344 | INFO     | current chi2=10.897351157181076 (change=23.304724401730216 %)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,344 | INFO     | right removable region: 1279
[2025-11-26 18:19:22] 2025-11-26 23:18:12,346 | INFO     | sum of square deviations: 650284466078.3673
[2025-11-26 18:19:22] 2025-11-26 23:18:12,405 | INFO     | sum of deviations: 1907633401730.94
[2025-11-26 18:19:22] 2025-11-26 23:18:12,406 | INFO     | mean x: 1764160040.7398438
[2025-11-26 18:19:22] 2025-11-26 23:18:12,406 | INFO     | mean y: 2970461.91875
[2025-11-26 18:19:22] 2025-11-26 23:18:12,406 | INFO     | intersect: -5172257911.610894
[2025-11-26 18:19:22] 2025-11-26 23:18:12,415 | INFO     | chi2: 11.250258287942886
[2025-11-26 18:19:22] 2025-11-26 23:18:12,415 | INFO     | current chi2=11.250258287942886 (change=20.82097314291759 %)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,415 | INFO     | left removable region: 10
[2025-11-26 18:19:22] 2025-11-26 23:18:12,417 | INFO     | sum of square deviations: 633663125980.8083
[2025-11-26 18:19:22] 2025-11-26 23:18:12,464 | INFO     | sum of deviations: 2354967799244.1177
[2025-11-26 18:19:22] 2025-11-26 23:18:12,465 | INFO     | mean x: 1764160010.248227
[2025-11-26 18:19:22] 2025-11-26 23:18:12,465 | INFO     | mean y: 2983463.609141056
[2025-11-26 18:19:22] 2025-11-26 23:18:12,465 | INFO     | intersect: -6553402487.393119
[2025-11-26 18:19:22] 2025-11-26 23:18:12,467 | INFO     | chi2: 7.07526993642429
[2025-11-26 18:19:22] 2025-11-26 23:18:12,467 | INFO     | current memory leak: 3.72 B/s (using 1269 data points, chi2=7.08)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,468 | INFO     | could have reported an average CPU frequency of 2599 MHz (46 samples)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,468 | INFO     | ..............................
[2025-11-26 18:19:22] 2025-11-26 23:18:12,468 | INFO     | . Timing measurements:
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | . get job = 0 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | . initial setup = 4 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | . payload setup = 19 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | . stage-in = 0 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | . payload execution = 78339 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | . stage-out = 8 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | . log creation = 2 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,469 | INFO     | ..............................
[2025-11-26 18:19:22] 2025-11-26 23:18:12,661 | INFO     | 
[2025-11-26 18:19:22] 2025-11-26 23:18:12,662 | INFO     | job summary report
[2025-11-26 18:19:22] 2025-11-26 23:18:12,662 | INFO     | --------------------------------------------------
[2025-11-26 18:19:22] 2025-11-26 23:18:12,662 | INFO     | PanDA job id: 6895385442
[2025-11-26 18:19:22] 2025-11-26 23:18:12,662 | INFO     | task id: 47556149
[2025-11-26 18:19:22] 2025-11-26 23:18:12,662 | INFO     | errors: (none)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:19:22] 2025-11-26 23:18:12,662 | INFO     | pilot state: finished 
[2025-11-26 18:19:22] 2025-11-26 23:18:12,667 | INFO     | transexitcode: 0
[2025-11-26 18:19:22] 2025-11-26 23:18:12,667 | INFO     | exeerrorcode: 0
[2025-11-26 18:19:22] 2025-11-26 23:18:12,667 | INFO     | exeerrordiag: 
[2025-11-26 18:19:22] 2025-11-26 23:18:12,667 | INFO     | exitcode: 0
[2025-11-26 18:19:22] 2025-11-26 23:18:12,667 | INFO     | exitmsg: OK
[2025-11-26 18:19:22] 2025-11-26 23:18:12,667 | INFO     | cpuconsumptiontime: 311209 s
[2025-11-26 18:19:22] 2025-11-26 23:18:12,667 | INFO     | nevents: 1000
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | neventsw: 0
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | pid: 1261970
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | pgrp: 1261970
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | corecount: 8
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | event service: False
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | sizes: {0: 2283487, 1: 2284172, 2: 2284371, 13: 2284371, 16: 2284689, 24: 2284717, 78364: 2345593, 78365: 2345592, 78375: 2354642, 78378: 2354698, 78401: 2354944}
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | --------------------------------------------------
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | 
[2025-11-26 18:19:22] 2025-11-26 23:18:12,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 18:19:22] 2025-11-26 23:18:12,695 | INFO     | time since job start (78437s) is within the limit (172800.0s)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:19:22] 2025-11-26 23:18:12,725 | INFO     | job 6895385442 has completed (purged errors)
[2025-11-26 18:19:22] 2025-11-26 23:18:12,725 | INFO     | overall cleanup function is called
[2025-11-26 18:19:22] 2025-11-26 23:18:13,752 | INFO     | --- collectZombieJob: --- 10, [1261970]
[2025-11-26 18:19:22] 2025-11-26 23:18:13,752 | INFO     | zombie collector waiting for pid 1261970
[2025-11-26 18:19:22] 2025-11-26 23:18:13,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:19:22] 2025-11-26 23:18:13,752 | INFO     | collected zombie processes
[2025-11-26 18:19:22] 2025-11-26 23:18:13,753 | INFO     | will attempt to kill all subprocesses of pid=1261970
[2025-11-26 18:19:22] 2025-11-26 23:18:15,424 | INFO     | process IDs to be killed: [1261970] (in reverse order)
[2025-11-26 18:19:22] 2025-11-26 23:18:16,144 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:19:22] 2025-11-26 23:18:16,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:19:22] 2025-11-26 23:18:16,185 | INFO     | did not find any defunct processes belonging to 1261970
[2025-11-26 18:19:22] 2025-11-26 23:18:16,223 | INFO     | did not find any defunct processes belonging to 1261970
[2025-11-26 18:19:22] 2025-11-26 23:18:16,225 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:19:22] 2025-11-26 23:18:16,225 | INFO     | ready for new job
[2025-11-26 18:19:22] 2025-11-26 23:18:16,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:19:22] 2025-11-26 23:18:16,237 | INFO     | ***************************************
[2025-11-26 18:19:22] 2025-11-26 23:18:16,237 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:19:22] 2025-11-26 23:18:16,238 | INFO     | ***************************************
[2025-11-26 18:19:22] 2025-11-26 23:18:16,238 | INFO     | 
[2025-11-26 18:19:22] 2025-11-26 23:18:16,240 | INFO     | architecture information:
[2025-11-26 18:19:22] 2025-11-26 23:18:16,243 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:19:22] 2025-11-26 23:18:16,446 | INFO     | cat /etc/os-release:
[2025-11-26 18:19:22] NAME="CentOS Linux"
[2025-11-26 18:19:22] VERSION="7 (Core)"
[2025-11-26 18:19:22] ID="centos"
[2025-11-26 18:19:22] ID_LIKE="rhel fedora"
[2025-11-26 18:19:22] VERSION_ID="7"
[2025-11-26 18:19:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:19:22] ANSI_COLOR="0;31"
[2025-11-26 18:19:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:19:22] HOME_URL="https://www.centos.org/"
[2025-11-26 18:19:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:19:22] 
[2025-11-26 18:19:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:19:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:19:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:19:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:19:22] 
[2025-11-26 18:19:22] 2025-11-26 23:18:16,446 | INFO     | ***************************************
[2025-11-26 18:19:22] 2025-11-26 23:18:16,972 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 18:19:22] 2025-11-26 23:18:17,092 | INFO     | sufficient remaining disk space (71965868032 B)
[2025-11-26 18:19:22] 2025-11-26 23:18:17,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:19:22] 2025-11-26 23:18:17,093 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:19:22] 2025-11-26 23:18:17,093 | INFO     | update_server=False
[2025-11-26 18:19:22] 2025-11-26 23:18:17,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:19:22] 2025-11-26 23:18:17,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:19:22] 2025-11-26 23:18:17,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:19:22] 2025-11-26 23:18:17,094 | INFO     | aborting loop
[2025-11-26 18:19:22] 2025-11-26 23:18:17,538 | INFO     | all job control threads have been joined
[2025-11-26 18:19:22] 2025-11-26 23:18:17,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:19:22] 2025-11-26 23:18:17,750 | INFO     | all payload control threads have been joined
[2025-11-26 18:19:22] 2025-11-26 23:18:17,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:19:22] 2025-11-26 23:18:18,099 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,099 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,177 | INFO     | all data control threads have been joined
[2025-11-26 18:19:22] 2025-11-26 23:18:18,266 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,267 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,458 | INFO     | [job] validate thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,516 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,546 | INFO     | [job] control thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,705 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:18,756 | INFO     | [payload] control thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:19,039 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:19,100 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:19,142 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:19,199 | INFO     | [data] control thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:19,341 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:21,838 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:19:22] 2025-11-26 23:18:47,113 | INFO     | PID=1254804 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:19:22] 2025-11-26 23:18:47,114 | INFO     | .. there are 43 such processes running
[2025-11-26 18:19:22] 2025-11-26 23:18:47,115 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:19:22] 2025-11-26 23:18:47,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:19:22] 2025-11-26 23:18:47,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:19:22] 2025-11-26 23:19:15,578 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:19:22] 2025-11-26 23:19:16,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252896114496)>', '<ExcThread(monitor, started 140252383520512)>']
[2025-11-26 18:19:22] 2025-11-26 23:19:16,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:19:22] 2025-11-26 23:19:16,360 | INFO     | [monitor] control thread has ended
[2025-11-26 18:19:22] 2025-11-26 23:19:21,091 | INFO     | all workflow threads have been joined
[2025-11-26 18:19:22] 2025-11-26 23:19:21,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:19:22] 2025-11-26 23:19:21,094 | INFO     | traces error code: 0
[2025-11-26 18:19:22] 2025-11-26 23:19:21,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:19:22] 2025-11-26 23:19:21,404 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:19:22] 2025-11-26 23:19:21,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:19:22] 2025-11-26 23:19:21,410 [wrapper] pilotpid: 1254804
[2025-11-26 18:19:22] 2025-11-26 23:19:21,413 [wrapper] Pilot exit status: 0
[2025-11-26 18:19:22] 2025-11-26 23:19:21,428 [wrapper] pandaids: 6895385442
[2025-11-26 18:19:22] 2025-11-26 23:19:21,646 [wrapper] cleanup supervisor_pilot 2072149 1254805
[2025-11-26 18:19:22] 2025-11-26 23:19:21,663 [wrapper] Test setup, not cleaning
[2025-11-26 18:19:22] 2025-11-26 23:19:21,666 [wrapper] apfmon messages muted
[2025-11-26 18:19:22] 2025-11-26 23:19:21,669 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:19:22] 2025-11-26 23:19:21,673 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:19:22]  *** Error codes and diagnostics ***
[2025-11-26 18:19:22]     "exeErrorCode": 0,
[2025-11-26 18:19:22]     "exeErrorDiag": "",
[2025-11-26 18:19:22]     "pilotErrorCode": 0,
[2025-11-26 18:19:22]     "pilotErrorDiag": "",
[2025-11-26 18:19:22]  *** Listing of results directory ***
[2025-11-26 18:19:22] total 1333940
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-26 18:19:22] -rwx------. 1 boincer umatlas     36292 Nov 24 00:17 runpilot2-wrapper.sh
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:17 queuedata.json
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:19:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:30 run_atlas
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:30 job.xml
[2025-11-26 18:19:22] -rw-r--r--. 2 boincer umatlas 411554268 Nov 25 20:30 EVNT.47483658._001237.pool.root.1
[2025-11-26 18:19:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:30 start_atlas.sh
[2025-11-26 18:19:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:30 shared
[2025-11-26 18:19:22] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 20:30 input.tar.gz
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:30 boinc_lockfile
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 20:30 pandaJob.out
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas        57 Nov 25 20:30 setup.sh.local
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas    991877 Nov 25 20:30 agis_schedconf.cvmfs.json
[2025-11-26 18:19:22] drwx------. 5 boincer umatlas      4096 Nov 25 20:30 pilot3
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:48 boinc_task_state.xml
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas 925941783 Nov 26 18:16 HITS.47556149._002235.pool.root.1
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas      1066 Nov 26 18:17 memory_monitor_summary.json
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas   2349108 Nov 26 18:17 log.47556149._002235.job.log.tgz.1
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas      8623 Nov 26 18:18 heartbeat.json
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas        95 Nov 26 18:18 pilot_heartbeat.json
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas      6659 Nov 26 18:19 init_data.xml
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas      4824 Nov 26 18:19 pilotlog.txt
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 18:19 boinc_mmap_file
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas   9919598 Nov 26 18:19 log.47556149._002235.job.log.1
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas        29 Nov 26 18:19 wrapper_checkpoint.txt
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas       353 Nov 26 18:19 output.list
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:19 runtime_log
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas  12288000 Nov 26 18:19 result.tar.gz
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 18:19 runtime_log.err
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas       660 Nov 26 18:19 9daMDm67dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBTLKDmsyQzIo.diag
[2025-11-26 18:19:22] -rw-r--r--. 1 boincer umatlas     21875 Nov 26 18:19 stderr.txt
[2025-11-26 18:19:22] HITS file was successfully produced:
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas 925941783 Nov 26 18:16 shared/HITS.pool.root.1
[2025-11-26 18:19:22]  *** Contents of shared directory: ***
[2025-11-26 18:19:22] total 1318756
[2025-11-26 18:19:22] -rw-r--r--. 2 boincer umatlas 411554268 Nov 25 20:30 ATLAS.root_0
[2025-11-26 18:19:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:30 start_atlas.sh
[2025-11-26 18:19:22] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 20:30 input.tar.gz
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas 925941783 Nov 26 18:16 HITS.pool.root.1
[2025-11-26 18:19:22] -rw-------. 1 boincer umatlas  12288000 Nov 26 18:19 result.tar.gz
18:19:23 (1250592): run_atlas exited; CPU time 314388.214542
18:19:23 (1250592): called boinc_finish(0)

</stderr_txt>
]]>

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