Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:59 (3329782): wrapper (7.7.26015): starting
00:04:59 (3329782): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:04:59] Arguments: --nthreads 12
[2025-11-25 00:04:59] Threads: 12
[2025-11-25 00:04:59] Checking for CVMFS
[2025-11-25 00:05:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:05:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:05:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:05:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:05:01] 2.13.2.0 6914 33957 292588 153270 2 447 26270280 40960000 26966 16776704 0 125608455 99.625 119875566 36580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:05:01] CVMFS is ok
[2025-11-25 00:05:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:05:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:05:01] Further information can be found at the LHC@home message board.
[2025-11-25 00:05:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:05:01] Checking for apptainer binary...
[2025-11-25 00:05:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:05:01] Running /usr/bin/apptainer --version
[2025-11-25 00:05:01] apptainer version 1.4.4-1.el9
[2025-11-25 00:05:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:05:02] c-212-1.aglt2.org
[2025-11-25 00:05:02] apptainer works
[2025-11-25 00:05:02] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:05:02] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:05:02] Starting ATLAS job with PandaID=6895368259
[2025-11-25 00:05:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:28:46]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:28:46] 2025-11-26 07:27:53,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:28:46] 2025-11-26 07:27:53,350 | INFO     | time since job start (94941s) is within the limit (172800.0s)
[2025-11-26 02:28:46] 2025-11-26 07:27:55,357 | INFO     | time since job start (94943s) is within the limit (172800.0s)
[2025-11-26 02:28:46] 2025-11-26 07:27:55,736 | INFO     | monitor loop #5048: job 0:6895368259 is in state 'finished'
[2025-11-26 02:28:46] 2025-11-26 07:27:55,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:28:46] 2025-11-26 07:27:57,370 | INFO     | time since job start (94945s) is within the limit (172800.0s)
[2025-11-26 02:28:46] 2025-11-26 07:27:58,259 | INFO     | monitor loop #5049: job 0:6895368259 is in state 'finished'
[2025-11-26 02:28:46] 2025-11-26 07:27:58,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:28:46] 2025-11-26 07:27:59,388 | INFO     | time since job start (94947s) is within the limit (172800.0s)
[2025-11-26 02:28:46] 2025-11-26 07:28:00,774 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 02:28:46] 2025-11-26 07:28:00,823 | INFO     | monitor loop #5050: job 0:6895368259 is in state 'finished'
[2025-11-26 02:28:46] 2025-11-26 07:28:00,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:28:46] 2025-11-26 07:28:00,867 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3093.0962604166657
[2025-11-26 02:28:46] 2025-11-26 07:28:01,363 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895368259/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:28:46] 2025-11-26 07:28:01,499 | INFO     | time since job start (94949s) is within the limit (172800.0s)
[2025-11-26 02:28:46] 2025-11-26 07:28:01,499 | INFO     | extracted standard info from prmon json
[2025-11-26 02:28:46] 2025-11-26 07:28:01,499 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:28:46] 2025-11-26 07:28:01,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:28:46] 2025-11-26 07:28:01,606 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:28:46] 2025-11-26 07:28:01,607 | INFO     | sum of square deviations: 1165897566065.8088
[2025-11-26 02:28:46] 2025-11-26 07:28:02,192 | INFO     | sum of deviations: 43391841745372.02
[2025-11-26 02:28:46] 2025-11-26 07:28:02,192 | INFO     | mean x: 1764094595.1723473
[2025-11-26 02:28:46] 2025-11-26 07:28:02,192 | INFO     | mean y: 4857040.634083602
[2025-11-26 02:28:46] 2025-11-26 07:28:02,192 | INFO     | intersect: -65650407817.56866
[2025-11-26 02:28:46] 2025-11-26 07:28:02,211 | INFO     | chi2: 56.78037530996035
[2025-11-26 02:28:46] 2025-11-26 07:28:02,212 | INFO     | sum of square deviations: 1154687883809.6387
[2025-11-26 02:28:46] 2025-11-26 07:28:02,527 | INFO     | sum of deviations: 44488075983563.11
[2025-11-26 02:28:46] 2025-11-26 07:28:02,527 | INFO     | mean x: 1764094442.679355
[2025-11-26 02:28:46] 2025-11-26 07:28:02,527 | INFO     | mean y: 4871953.507096774
[2025-11-26 02:28:46] 2025-11-26 07:28:02,528 | INFO     | intersect: -67962557780.98463
[2025-11-26 02:28:46] 2025-11-26 07:28:02,529 | INFO     | chi2: 50.88864937103059
[2025-11-26 02:28:46] 2025-11-26 07:28:02,529 | INFO     | current chi2=50.88864937103059 (change=10.376342013886337 %)
[2025-11-26 02:28:46] 2025-11-26 07:28:02,529 | INFO     | right removable region: 1549
[2025-11-26 02:28:46] 2025-11-26 07:28:02,552 | INFO     | sum of square deviations: 1154685823229.6392
[2025-11-26 02:28:46] 2025-11-26 07:28:02,891 | INFO     | sum of deviations: 42325356962478.01
[2025-11-26 02:28:46] 2025-11-26 07:28:02,891 | INFO     | mean x: 1764094747.679355
[2025-11-26 02:28:46] 2025-11-26 07:28:02,891 | INFO     | mean y: 4871546.591612903
[2025-11-26 02:28:46] 2025-11-26 07:28:02,891 | INFO     | intersect: -64658553264.77546
[2025-11-26 02:28:46] 2025-11-26 07:28:02,907 | INFO     | chi2: 53.15704680439787
[2025-11-26 02:28:46] 2025-11-26 07:28:02,907 | INFO     | current chi2=53.15704680439787 (change=6.381304254829178 %)
[2025-11-26 02:28:46] 2025-11-26 07:28:02,907 | INFO     | left removable region: 10
[2025-11-26 02:28:46] 2025-11-26 07:28:02,909 | INFO     | sum of square deviations: 1130276376514.4524
[2025-11-26 02:28:46] 2025-11-26 07:28:03,374 | INFO     | monitor loop #5051: job 0:6895368259 is in state 'finished'
[2025-11-26 02:28:46] 2025-11-26 07:28:03,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:28:46] 2025-11-26 07:28:03,466 | INFO     | sum of deviations: 42957313535031.53
[2025-11-26 02:28:46] 2025-11-26 07:28:03,466 | INFO     | mean x: 1764094717.1916828
[2025-11-26 02:28:46] 2025-11-26 07:28:03,466 | INFO     | mean y: 4899036.649122807
[2025-11-26 02:28:46] 2025-11-26 07:28:03,466 | INFO     | intersect: -67041330935.51814
[2025-11-26 02:28:46] 2025-11-26 07:28:03,467 | INFO     | chi2: 45.239970679893574
[2025-11-26 02:28:46] 2025-11-26 07:28:03,488 | INFO     | current memory leak: 38.01 B/s (using 1539 data points, chi2=45.24)
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | could have reported an average CPU frequency of 3060 MHz (55 samples)
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | ..............................
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | . Timing measurements:
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | . get job = 0 s
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | . initial setup = 3 s
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | . payload setup = 17 s
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | . stage-in = 0 s
[2025-11-26 02:28:46] 2025-11-26 07:28:03,489 | INFO     | . payload execution = 94826 s
[2025-11-26 02:28:46] 2025-11-26 07:28:03,490 | INFO     | . stage-out = 20 s
[2025-11-26 02:28:46] 2025-11-26 07:28:03,490 | INFO     | . log creation = 6 s
[2025-11-26 02:28:46] 2025-11-26 07:28:03,490 | INFO     | ..............................
[2025-11-26 02:28:46] 2025-11-26 07:28:03,571 | INFO     | time since job start (94951s) is within the limit (172800.0s)
[2025-11-26 02:28:46] 2025-11-26 07:28:04,375 | INFO     | 
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | job summary report
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | --------------------------------------------------
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | PanDA job id: 6895368259
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | task id: 47556149
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | errors: (none)
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | pilot state: finished 
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | transexitcode: 0
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | exeerrorcode: 0
[2025-11-26 02:28:46] 2025-11-26 07:28:04,376 | INFO     | exeerrordiag: 
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | exitcode: 0
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | exitmsg: OK
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | cpuconsumptiontime: 213457 s
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | nevents: 1000
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | neventsw: 0
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | pid: 3360906
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | pgrp: 3360906
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | corecount: 12
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | event service: False
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | sizes: {0: 2284310, 11: 2284310, 14: 2284600, 22: 2284628, 94847: 2352925, 94868: 2361952, 94873: 2362136, 94920: 2362382}
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | --------------------------------------------------
[2025-11-26 02:28:46] 2025-11-26 07:28:04,377 | INFO     | 
[2025-11-26 02:28:46] 2025-11-26 07:28:04,378 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 02:28:46] 2025-11-26 07:28:04,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:28:46] 2025-11-26 07:28:04,591 | INFO     | job 6895368259 has completed (purged errors)
[2025-11-26 02:28:46] 2025-11-26 07:28:04,591 | INFO     | overall cleanup function is called
[2025-11-26 02:28:46] 2025-11-26 07:28:05,848 | INFO     | --- collectZombieJob: --- 10, [3360906]
[2025-11-26 02:28:46] 2025-11-26 07:28:05,849 | INFO     | zombie collector waiting for pid 3360906
[2025-11-26 02:28:46] 2025-11-26 07:28:05,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:28:46] 2025-11-26 07:28:05,849 | INFO     | collected zombie processes
[2025-11-26 02:28:46] 2025-11-26 07:28:05,849 | INFO     | will attempt to kill all subprocesses of pid=3360906
[2025-11-26 02:28:46] 2025-11-26 07:28:11,470 | INFO     | process IDs to be killed: [3360906] (in reverse order)
[2025-11-26 02:28:46] 2025-11-26 07:28:11,766 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:28:46] 2025-11-26 07:28:11,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:28:46] 2025-11-26 07:28:12,221 | INFO     | did not find any defunct processes belonging to 3360906
[2025-11-26 02:28:46] 2025-11-26 07:28:12,337 | INFO     | did not find any defunct processes belonging to 3360906
[2025-11-26 02:28:46] 2025-11-26 07:28:12,364 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:28:46] 2025-11-26 07:28:12,364 | INFO     | ready for new job
[2025-11-26 02:28:46] 2025-11-26 07:28:12,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:28:46] 2025-11-26 07:28:12,389 | INFO     | ***************************************
[2025-11-26 02:28:46] 2025-11-26 07:28:12,389 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:28:46] 2025-11-26 07:28:12,389 | INFO     | ***************************************
[2025-11-26 02:28:46] 2025-11-26 07:28:12,389 | INFO     | 
[2025-11-26 02:28:46] 2025-11-26 07:28:12,488 | INFO     | architecture information:
[2025-11-26 02:28:46] 2025-11-26 07:28:12,717 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:28:46] 2025-11-26 07:28:12,903 | INFO     | cat /etc/os-release:
[2025-11-26 02:28:46] NAME="CentOS Linux"
[2025-11-26 02:28:46] VERSION="7 (Core)"
[2025-11-26 02:28:46] ID="centos"
[2025-11-26 02:28:46] ID_LIKE="rhel fedora"
[2025-11-26 02:28:46] VERSION_ID="7"
[2025-11-26 02:28:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:28:46] ANSI_COLOR="0;31"
[2025-11-26 02:28:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:28:46] HOME_URL="https://www.centos.org/"
[2025-11-26 02:28:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:28:46] 
[2025-11-26 02:28:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:28:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:28:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:28:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:28:46] 
[2025-11-26 02:28:46] 2025-11-26 07:28:12,903 | INFO     | ***************************************
[2025-11-26 02:28:46] 2025-11-26 07:28:13,407 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 02:28:46] 2025-11-26 07:28:13,558 | INFO     | sufficient remaining disk space (118685171712 B)
[2025-11-26 02:28:46] 2025-11-26 07:28:13,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:28:46] 2025-11-26 07:28:13,558 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:28:46] 2025-11-26 07:28:13,558 | INFO     | update_server=False
[2025-11-26 02:28:46] 2025-11-26 07:28:13,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:28:46] 2025-11-26 07:28:13,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:28:46] 2025-11-26 07:28:13,604 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 02:28:46] 2025-11-26 07:28:13,605 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 02:28:46] 2025-11-26 07:28:13,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:28:46] 2025-11-26 07:28:13,605 | INFO     | will abort loop
[2025-11-26 02:28:46] 2025-11-26 07:28:13,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:28:46] 2025-11-26 07:28:14,036 | INFO     | all data control threads have been joined
[2025-11-26 02:28:46] 2025-11-26 07:28:14,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:28:46] 2025-11-26 07:28:14,347 | INFO     | all payload control threads have been joined
[2025-11-26 02:28:46] 2025-11-26 07:28:14,568 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:14,615 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:14,666 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:14,674 | INFO     | all job control threads have been joined
[2025-11-26 02:28:46] 2025-11-26 07:28:14,904 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:14,946 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:15,043 | INFO     | [data] control thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:15,043 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:15,251 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:15,355 | INFO     | [payload] control thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:15,700 | INFO     | [job] control thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:15,994 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:15,994 | INFO     | [job] validate thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:16,012 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:16,044 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:16,196 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:17,594 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:28:46] 2025-11-26 07:28:29,433 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:28:46] 2025-11-26 07:28:30,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658574133056)>', '<ExcThread(monitor, started 139658075813632)>']
[2025-11-26 02:28:46] 2025-11-26 07:28:35,267 | INFO     | all workflow threads have been joined
[2025-11-26 02:28:46] 2025-11-26 07:28:35,268 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:28:46] 2025-11-26 07:28:35,268 | INFO     | traces error code: 0
[2025-11-26 02:28:46] 2025-11-26 07:28:35,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:28:46] 2025-11-26 07:28:40,059 | INFO     | PID=3340356 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 02:28:46] 2025-11-26 07:28:40,059 | INFO     | .. there are 36 such processes running
[2025-11-26 02:28:46] 2025-11-26 07:28:40,069 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:28:46] 2025-11-26 07:28:40,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:28:46] 2025-11-26 07:28:40,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:28:46] 2025-11-26 07:28:40,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:28:46] 2025-11-26 07:28:40,070 | INFO     | [monitor] control thread has ended
[2025-11-26 02:28:46] 2025-11-26 07:28:44,058 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:28:46] 2025-11-26 07:28:44,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:28:46] 2025-11-26 07:28:44,218 [wrapper] pilotpid: 3340356
[2025-11-26 02:28:46] 2025-11-26 07:28:44,275 [wrapper] Pilot exit status: 0
[2025-11-26 02:28:46] 2025-11-26 07:28:44,443 [wrapper] pandaids: 6895368259
[2025-11-26 02:28:46] 2025-11-26 07:28:45,231 [wrapper] cleanup supervisor_pilot  904674 3340357
[2025-11-26 02:28:46] 2025-11-26 07:28:45,257 [wrapper] Test setup, not cleaning
[2025-11-26 02:28:46] 2025-11-26 07:28:45,271 [wrapper] apfmon messages muted
[2025-11-26 02:28:46] 2025-11-26 07:28:45,297 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:28:46] 2025-11-26 07:28:45,326 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:28:46]  *** Error codes and diagnostics ***
[2025-11-26 02:28:46]     "exeErrorCode": 0,
[2025-11-26 02:28:46]     "exeErrorDiag": "",
[2025-11-26 02:28:46]     "pilotErrorCode": 0,
[2025-11-26 02:28:46]     "pilotErrorDiag": "",
[2025-11-26 02:28:46]  *** Listing of results directory ***
[2025-11-26 02:28:46] total 1334712
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 14:32 pilot3.tar.gz
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 14:46 queuedata.json
[2025-11-26 02:28:46] -rwx------. 1 boincer umatlas     36292 Nov 23 14:47 runpilot2-wrapper.sh
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:28:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:04 run_atlas
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:04 job.xml
[2025-11-26 02:28:46] -rw-r--r--. 2 boincer umatlas 410816184 Nov 25 00:04 EVNT.47483658._001188.pool.root.1
[2025-11-26 02:28:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-26 02:28:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:04 shared
[2025-11-26 02:28:46] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 00:04 input.tar.gz
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:04 boinc_lockfile
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:05 pandaJob.out
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas        57 Nov 25 00:05 setup.sh.local
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas    991801 Nov 25 00:05 agis_schedconf.cvmfs.json
[2025-11-26 02:28:46] drwx------. 5 boincer umatlas      4096 Nov 25 00:05 pilot3
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas       533 Nov 26 01:49 boinc_task_state.xml
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas      6948 Nov 26 02:20 init_data.xml
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas 924015809 Nov 26 02:20 HITS.47556149._001742.pool.root.1
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas      1076 Nov 26 02:26 memory_monitor_summary.json
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas   1516240 Nov 26 02:27 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas   2915366 Nov 26 02:27 log.47556149._001742.job.log.tgz.1
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas      8649 Nov 26 02:28 heartbeat.json
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas        95 Nov 26 02:28 pilot_heartbeat.json
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas       823 Nov 26 02:28 pilotlog.txt
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas        29 Nov 26 02:28 wrapper_checkpoint.txt
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 02:28 boinc_mmap_file
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas  11080332 Nov 26 02:28 log.47556149._001742.job.log.1
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas       353 Nov 26 02:28 output.list
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas       620 Nov 26 02:28 runtime_log
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas  14018560 Nov 26 02:28 result.tar.gz
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas      9340 Nov 26 02:28 runtime_log.err
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas       666 Nov 26 02:28 ihINDmJEVh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt9KKDmASzlTm.diag
[2025-11-26 02:28:46] -rw-r--r--. 1 boincer umatlas     21770 Nov 26 02:28 stderr.txt
[2025-11-26 02:28:46] HITS file was successfully produced:
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas 924015809 Nov 26 02:20 shared/HITS.pool.root.1
[2025-11-26 02:28:46]  *** Contents of shared directory: ***
[2025-11-26 02:28:46] total 1317844
[2025-11-26 02:28:46] -rw-r--r--. 2 boincer umatlas 410816184 Nov 25 00:04 ATLAS.root_0
[2025-11-26 02:28:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-26 02:28:46] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 00:04 input.tar.gz
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas 924015809 Nov 26 02:20 HITS.pool.root.1
[2025-11-26 02:28:46] -rw-------. 1 boincer umatlas  14018560 Nov 26 02:28 result.tar.gz
02:28:47 (3329782): run_atlas exited; CPU time 214862.438895
02:28:47 (3329782): called boinc_finish(0)

</stderr_txt>
]]>

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