Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:15:52 (1340977): wrapper (7.7.26015): starting
21:15:52 (1340977): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 21:15:52] Arguments: --nthreads 12
[2025-11-24 21:15:52] Threads: 12
[2025-11-24 21:15:52] Checking for CVMFS
[2025-11-24 21:15:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 21:15:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 21:15:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 21:15:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 21:15:53] 2.11.5.0 3793068 26204 307964 153272 3 86 43588902 45568001 14852 130560 0 244390650 99.779 151989805 19897 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 21:15:53] CVMFS is ok
[2025-11-24 21:15:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 21:15:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 21:15:53] Further information can be found at the LHC@home message board.
[2025-11-24 21:15:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 21:15:53] Checking for apptainer binary...
[2025-11-24 21:15:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 21:15:53] Running /usr/bin/apptainer --version
[2025-11-24 21:15:53] apptainer version 1.4.1-1.el9
[2025-11-24 21:15:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 21:15:53] wns0029.triumf.lcg
[2025-11-24 21:15:53] apptainer works
[2025-11-24 21:15:53] Set ATHENA_PROC_NUMBER=12
[2025-11-24 21:15:53] Set ATHENA_CORE_NUMBER=12
[2025-11-24 21:15:53] Starting ATLAS job with PandaID=6895939041
[2025-11-24 21:15:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:22:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 21:22:42] 2025-11-25 05:22:09,570 | WARNING  | wrong length of table data, x=[1764047851.0, 1764047912.0, 1764047973.0], y=[1428.0, 550260.0, 637727.0] (must be same and length>=4)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | could have reported an average CPU frequency of 2466 MHz (4 samples)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | ..............................
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . Timing measurements:
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . get job = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . initial setup = 3 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . payload setup = 18 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . stage-in = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . payload execution = 154 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . stage-out = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . log creation = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | ..............................
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895939041/pilotlog.txt
[2025-11-24 21:22:42] 2025-11-25 05:22:09,624 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 21:22:42] - Log from pilotlog.txt -
[2025-11-24 21:22:42] 2025-11-25 05:22:09,556 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895939041/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | INFO     | extracted standard info from prmon json
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 21:22:42] 2025-11-25 05:22:09,570 | WARNING  | wrong length of table data, x=[1764047851.0, 1764047912.0, 1764047973.0], y=[1428.0, 550260.0, 637727.0] (must be same and length>=4)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | could have reported an average CPU frequency of 2466 MHz (4 samples)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | ..............................
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . Timing measurements:
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . get job = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . initial setup = 3 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . payload setup = 18 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . stage-in = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . payload execution = 154 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . stage-out = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . log creation = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | ..............................
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895939041/pilotlog.txt
[2025-11-24 21:22:42] 2025-11-25 05:22:09,625 | WARNING  | 
[2025-11-24 21:22:42] [begin log extracts]
[2025-11-24 21:22:42] - Log from pilotlog.txt -
[2025-11-24 21:22:42] 2025-11-25 05:22:09,556 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895939041/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | INFO     | extracted standard info from prmon json
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 21:22:42] 2025-11-25 05:22:09,557 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 21:22:42] 2025-11-25 05:22:09,570 | WARNING  | wrong length of table data, x=[1764047851.0, 1764047912.0, 1764047973.0], y=[1428.0, 550260.0, 637727.0] (must be same and length>=4)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | could have reported an average CPU frequency of 2466 MHz (4 samples)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | ..............................
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . Timing measurements:
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . get job = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . initial setup = 3 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . payload setup = 18 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . stage-in = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . payload execution = 154 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . stage-out = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,571 | INFO     | . log creation = 0 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | ..............................
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 21:22:42] 2025-11-25 05:22:09,572 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895939041/pilotlog.txt
[2025-11-24 21:22:42] [end log extracts]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,625 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,625 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 21:22:42] 2025-11-25 05:22:09,717 | INFO     | 
[2025-11-24 21:22:42] 2025-11-25 05:22:09,717 | INFO     | job summary report
[2025-11-24 21:22:42] 2025-11-25 05:22:09,717 | INFO     | --------------------------------------------------
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | PanDA job id: 6895939041
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | task id: 47556149
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 21:19:42,592 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | pilot state: failed 
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | transexitcode: 65
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | exeerrorcode: 65
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | exitcode: 65
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | cpuconsumptiontime: 45 s
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | nevents: 0
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | neventsw: 0
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | pid: 1352641
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | pgrp: 1352641
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | corecount: 12
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | event service: False
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | sizes: {0: 2283481, 1: 2284334, 12: 2284596, 23: 2284624, 177: 2314339, 178: 2314339, 316: 2314633}
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | --------------------------------------------------
[2025-11-24 21:22:42] 2025-11-25 05:22:09,718 | INFO     | 
[2025-11-24 21:22:42] 2025-11-25 05:22:09,719 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 21:22:42] 2025-11-25 05:22:09,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:22:42] 2025-11-25 05:22:09,739 | INFO     | job 6895939041 has completed (purged errors)
[2025-11-24 21:22:42] 2025-11-25 05:22:09,739 | INFO     | overall cleanup function is called
[2025-11-24 21:22:42] 2025-11-25 05:22:10,757 | INFO     | --- collectZombieJob: --- 10, [1352641]
[2025-11-24 21:22:42] 2025-11-25 05:22:10,757 | INFO     | zombie collector waiting for pid 1352641
[2025-11-24 21:22:42] 2025-11-25 05:22:10,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:22:42] 2025-11-25 05:22:10,757 | INFO     | collected zombie processes
[2025-11-24 21:22:42] 2025-11-25 05:22:10,757 | INFO     | will attempt to kill all subprocesses of pid=1352641
[2025-11-24 21:22:42] 2025-11-25 05:22:11,477 | INFO     | process IDs to be killed: [1352641] (in reverse order)
[2025-11-24 21:22:42] 2025-11-25 05:22:11,578 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:22:42] 2025-11-25 05:22:11,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:22:42] 2025-11-25 05:22:11,585 | INFO     | did not find any defunct processes belonging to 1352641
[2025-11-24 21:22:42] 2025-11-25 05:22:11,592 | INFO     | did not find any defunct processes belonging to 1352641
[2025-11-24 21:22:42] 2025-11-25 05:22:11,593 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:22:42] 2025-11-25 05:22:11,593 | INFO     | ready for new job
[2025-11-24 21:22:42] 2025-11-25 05:22:11,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:22:42] 2025-11-25 05:22:11,594 | INFO     | ***************************************
[2025-11-24 21:22:42] 2025-11-25 05:22:11,594 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:22:42] 2025-11-25 05:22:11,594 | INFO     | ***************************************
[2025-11-24 21:22:42] 2025-11-25 05:22:11,595 | INFO     | 
[2025-11-24 21:22:42] 2025-11-25 05:22:11,596 | INFO     | architecture information:
[2025-11-24 21:22:42] 2025-11-25 05:22:11,600 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:22:42] 2025-11-25 05:22:11,619 | INFO     | cat /etc/os-release:
[2025-11-24 21:22:42] NAME="CentOS Linux"
[2025-11-24 21:22:42] VERSION="7 (Core)"
[2025-11-24 21:22:42] ID="centos"
[2025-11-24 21:22:42] ID_LIKE="rhel fedora"
[2025-11-24 21:22:42] VERSION_ID="7"
[2025-11-24 21:22:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:22:42] ANSI_COLOR="0;31"
[2025-11-24 21:22:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:22:42] HOME_URL="https://www.centos.org/"
[2025-11-24 21:22:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:22:42] 
[2025-11-24 21:22:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:22:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:22:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:22:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:22:42] 
[2025-11-24 21:22:42] 2025-11-25 05:22:11,619 | INFO     | ***************************************
[2025-11-24 21:22:42] 2025-11-25 05:22:12,122 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 21:22:42] 2025-11-25 05:22:12,229 | INFO     | sufficient remaining disk space (1728312246272 B)
[2025-11-24 21:22:42] 2025-11-25 05:22:12,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:22:42] 2025-11-25 05:22:12,230 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:22:42] 2025-11-25 05:22:12,230 | INFO     | update_server=False
[2025-11-24 21:22:42] 2025-11-25 05:22:12,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:22:42] 2025-11-25 05:22:12,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:22:42] 2025-11-25 05:22:12,231 | INFO     | aborting loop
[2025-11-24 21:22:42] 2025-11-25 05:22:12,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:22:42] 2025-11-25 05:22:12,551 | INFO     | all payload control threads have been joined
[2025-11-24 21:22:42] 2025-11-25 05:22:12,585 | INFO     | all data control threads have been joined
[2025-11-24 21:22:42] 2025-11-25 05:22:12,863 | INFO     | all job control threads have been joined
[2025-11-24 21:22:42] 2025-11-25 05:22:13,236 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,237 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,370 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,416 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,544 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,557 | INFO     | [payload] control thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,591 | INFO     | [data] control thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,734 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,871 | INFO     | [job] control thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,905 | INFO     | [job] validate thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:13,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:22:42] 2025-11-25 05:22:14,097 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:14,353 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:14,476 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:14,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:22:42] 2025-11-25 05:22:15,738 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:17,921 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:22:42] 2025-11-25 05:22:18,159 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:22:42] 2025-11-25 05:22:19,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590476867392)>', '<ExcThread(monitor, started 140590075324160)>']
[2025-11-24 21:22:42] 2025-11-25 05:22:24,620 | INFO     | all workflow threads have been joined
[2025-11-24 21:22:42] 2025-11-25 05:22:24,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:22:42] 2025-11-25 05:22:24,620 | INFO     | traces error code: 0
[2025-11-24 21:22:42] 2025-11-25 05:22:24,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:22:42] 2025-11-25 05:22:42,080 | INFO     | PID=1344932 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:22:42] 2025-11-25 05:22:42,081 | INFO     | .. there are 21 such processes running
[2025-11-24 21:22:42] 2025-11-25 05:22:42,081 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:22:42] 2025-11-25 05:22:42,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:22:42] 2025-11-25 05:22:42,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:22:42] 2025-11-25 05:22:42,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:22:42] 2025-11-25 05:22:42,082 | INFO     | [monitor] control thread has ended
[2025-11-24 21:22:42] 2025-11-25 05:22:42,312 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:22:42] 2025-11-25 05:22:42,314 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:22:42] 2025-11-25 05:22:42,317 [wrapper] pilotpid: 1344932
[2025-11-24 21:22:42] 2025-11-25 05:22:42,319 [wrapper] Pilot exit status: 0
[2025-11-24 21:22:42] 2025-11-25 05:22:42,354 [wrapper] pandaids: 6895939041
[2025-11-24 21:22:42] 2025-11-25 05:22:42,428 [wrapper] cleanup supervisor_pilot 1344939 1344933
[2025-11-24 21:22:42] 2025-11-25 05:22:42,430 [wrapper] Test setup, not cleaning
[2025-11-24 21:22:42] 2025-11-25 05:22:42,432 [wrapper] apfmon messages muted
[2025-11-24 21:22:42] 2025-11-25 05:22:42,435 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:22:42] 2025-11-25 05:22:42,442 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:22:42]  *** Error codes and diagnostics ***
[2025-11-24 21:22:42]     "exeErrorCode": 65,
[2025-11-24 21:22:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 21:22:42]     "pilotErrorCode": 1305,
[2025-11-24 21:22:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 21:22:42]  *** Listing of results directory ***
[2025-11-24 21:22:42] total 405436
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc    576529 Nov 24 09:01 pilot3.tar.gz
[2025-11-24 21:22:42] -rwx------. 1 boinc boinc     36292 Nov 24 09:23 runpilot2-wrapper.sh
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc      5112 Nov 24 09:23 queuedata.json
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc       100 Nov 24 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:22:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 21:15 run_atlas
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc       105 Nov 24 21:15 job.xml
[2025-11-24 21:22:42] -rw-r--r--. 2 boinc boinc 410935941 Nov 24 21:15 EVNT.47483658._001405.pool.root.1
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc      6594 Nov 24 21:15 init_data.xml
[2025-11-24 21:22:42] -rw-r--r--. 2 boinc boinc     15847 Nov 24 21:15 start_atlas.sh
[2025-11-24 21:22:42] drwxrwx--x. 2 boinc boinc      4096 Nov 24 21:15 shared
[2025-11-24 21:22:42] -rw-r--r--. 2 boinc boinc    590102 Nov 24 21:15 input.tar.gz
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc         0 Nov 24 21:15 boinc_lockfile
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc      2785 Nov 24 21:15 pandaJob.out
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc    991801 Nov 24 21:16 agis_schedconf.cvmfs.json
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc   1516227 Nov 24 21:16 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:22:42] drwx------. 5 boinc boinc      4096 Nov 24 21:16 pilot3
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc       525 Nov 24 21:19 boinc_task_state.xml
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc       996 Nov 24 21:19 memory_monitor_summary.json
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc     49153 Nov 24 21:19 log.47556149._003920.job.log.tgz.1
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc     10340 Nov 24 21:22 heartbeat.json
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc        23 Nov 24 21:22 wrapper_checkpoint.txt
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc       823 Nov 24 21:22 pilotlog.txt
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc        95 Nov 24 21:22 pilot_heartbeat.json
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc    109957 Nov 24 21:22 log.47556149._003920.job.log.1
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc       186 Nov 24 21:22 output.list
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc       620 Nov 24 21:22 runtime_log
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc    184320 Nov 24 21:22 result.tar.gz
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc      8636 Nov 24 21:22 runtime_log.err
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc       647 Nov 24 21:22 rs2KDm5Sph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQoLKDmO2NVBn.diag
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc     22545 Nov 24 21:22 stderr.txt
[2025-11-24 21:22:42] -rw-r--r--. 1 boinc boinc      8192 Nov 24 21:22 boinc_mmap_file
[2025-11-24 21:22:42] No HITS result produced
[2025-11-24 21:22:42]  *** Contents of shared directory: ***
[2025-11-24 21:22:42] total 402084
[2025-11-24 21:22:42] -rw-r--r--. 2 boinc boinc 410935941 Nov 24 21:15 ATLAS.root_0
[2025-11-24 21:22:42] -rw-r--r--. 2 boinc boinc     15847 Nov 24 21:15 start_atlas.sh
[2025-11-24 21:22:42] -rw-r--r--. 2 boinc boinc    590102 Nov 24 21:15 input.tar.gz
[2025-11-24 21:22:42] -rw-------. 1 boinc boinc    184320 Nov 24 21:22 result.tar.gz
21:22:44 (1340977): run_atlas exited; CPU time 49.018141
21:22:44 (1340977): called boinc_finish(0)

</stderr_txt>
]]>

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