Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:54 (1301676): wrapper (7.7.26015): starting
00:01:54 (1301676): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:01:54] Arguments: --nthreads 9
[2025-11-25 00:01:54] Threads: 9
[2025-11-25 00:01:54] Checking for CVMFS
[2025-11-25 00:01:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:01:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:01:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:01:56] 2.13.3.0 13693 28161 351640 153270 1 396 32138494 40960000 23222 16776704 0 77975540 99.602 83513970 37442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:01:56] CVMFS is ok
[2025-11-25 00:01:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:01:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:01:56] Further information can be found at the LHC@home message board.
[2025-11-25 00:01:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:01:56] Checking for apptainer binary...
[2025-11-25 00:01:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:01:56] Running /usr/bin/apptainer --version
[2025-11-25 00:01:56] apptainer version 1.4.4-1.el9
[2025-11-25 00:01:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:01:56] c6-5-37-3.aglt2.org
[2025-11-25 00:01:56] apptainer works
[2025-11-25 00:01:56] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:01:56] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:01:56] Starting ATLAS job with PandaID=6895386412
[2025-11-25 00:01:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:04:00]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:04:00] 2025-11-26 00:03:25,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,193 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 19:04:00] 2025-11-26 00:03:26,256 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3013.952160714286
[2025-11-25 19:04:00] 2025-11-26 00:03:26,281 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895386412/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,282 | INFO     | extracted standard info from prmon json
[2025-11-25 19:04:00] 2025-11-26 00:03:26,282 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:04:00] 2025-11-26 00:03:26,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:04:00] 2025-11-26 00:03:26,300 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:04:00] 2025-11-26 00:03:26,301 | INFO     | sum of square deviations: 436805971651.1268
[2025-11-25 19:04:00] 2025-11-26 00:03:26,325 | INFO     | sum of deviations: 3146274063349.941
[2025-11-25 19:04:00] 2025-11-26 00:03:26,326 | INFO     | mean x: 1764081203.836753
[2025-11-25 19:04:00] 2025-11-26 00:03:26,326 | INFO     | mean y: 3020212.8412132026
[2025-11-25 19:04:00] 2025-11-26 00:03:26,326 | INFO     | intersect: -12703497777.960615
[2025-11-25 19:04:00] 2025-11-26 00:03:26,327 | INFO     | chi2: 7.345984654446576
[2025-11-25 19:04:00] 2025-11-26 00:03:26,328 | INFO     | sum of square deviations: 430987339332.6105
[2025-11-25 19:04:00] 2025-11-26 00:03:26,353 | INFO     | sum of deviations: 3570249241519.482
[2025-11-25 19:04:00] 2025-11-26 00:03:26,354 | INFO     | mean x: 1764081051.3405018
[2025-11-25 19:04:00] 2025-11-26 00:03:26,354 | INFO     | mean y: 3031324.1487455196
[2025-11-25 19:04:00] 2025-11-26 00:03:26,354 | INFO     | intersect: -14610411950.728369
[2025-11-25 19:04:00] 2025-11-26 00:03:26,355 | INFO     | chi2: 3.7733595442670387
[2025-11-25 19:04:00] 2025-11-26 00:03:26,355 | INFO     | current chi2=3.7733595442670387 (change=48.63371322205257 %)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,357 | INFO     | sum of square deviations: 425220547010.74854
[2025-11-25 19:04:00] 2025-11-26 00:03:26,377 | INFO     | sum of deviations: 3731500037705.491
[2025-11-25 19:04:00] 2025-11-26 00:03:26,377 | INFO     | mean x: 1764080898.8433843
[2025-11-25 19:04:00] 2025-11-26 00:03:26,377 | INFO     | mean y: 3035583.98559856
[2025-11-25 19:04:00] 2025-11-26 00:03:26,377 | INFO     | intersect: -15477561454.010384
[2025-11-25 19:04:00] 2025-11-26 00:03:26,379 | INFO     | chi2: 3.0022913643265086
[2025-11-25 19:04:00] 2025-11-26 00:03:26,379 | INFO     | current chi2=3.0022913643265086 (change=20.434527134103444 %)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,379 | INFO     | right removable region: 1110
[2025-11-25 19:04:00] 2025-11-26 00:03:26,380 | INFO     | sum of square deviations: 430986767152.6097
[2025-11-25 19:04:00] 2025-11-26 00:03:26,400 | INFO     | sum of deviations: 2761143100548.3237
[2025-11-25 19:04:00] 2025-11-26 00:03:26,400 | INFO     | mean x: 1764081356.3405018
[2025-11-25 19:04:00] 2025-11-26 00:03:26,400 | INFO     | mean y: 3030300.3754480286
[2025-11-25 19:04:00] 2025-11-26 00:03:26,400 | INFO     | intersect: -11298664872.415686
[2025-11-25 19:04:00] 2025-11-26 00:03:26,401 | INFO     | chi2: 4.582020940242432
[2025-11-25 19:04:00] 2025-11-26 00:03:26,402 | INFO     | current chi2=4.582020940242432 (change=37.625503512740075 %)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,403 | INFO     | sum of square deviations: 425219879184.16064
[2025-11-25 19:04:00] 2025-11-26 00:03:26,423 | INFO     | sum of deviations: 2661486483378.4014
[2025-11-25 19:04:00] 2025-11-26 00:03:26,423 | INFO     | mean x: 1764081508.8388839
[2025-11-25 19:04:00] 2025-11-26 00:03:26,423 | INFO     | mean y: 3032935.4212421244
[2025-11-25 19:04:00] 2025-11-26 00:03:26,423 | INFO     | intersect: -11038499507.418877
[2025-11-25 19:04:00] 2025-11-26 00:03:26,424 | INFO     | chi2: 4.505198721122965
[2025-11-25 19:04:00] 2025-11-26 00:03:26,425 | INFO     | current chi2=4.505198721122965 (change=1.6766012229399103 %)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,425 | INFO     | left removable region: 20
[2025-11-25 19:04:00] 2025-11-26 00:03:26,426 | INFO     | sum of square deviations: 401560880587.3584
[2025-11-25 19:04:00] 2025-11-26 00:03:26,452 | INFO     | sum of deviations: 3103404656367.662
[2025-11-25 19:04:00] 2025-11-26 00:03:26,452 | INFO     | mean x: 1764081478.342202
[2025-11-25 19:04:00] 2025-11-26 00:03:26,452 | INFO     | mean y: 3052402.4486238533
[2025-11-25 19:04:00] 2025-11-26 00:03:26,453 | INFO     | intersect: -13630393828.895971
[2025-11-25 19:04:00] 2025-11-26 00:03:26,454 | INFO     | chi2: 0.0910823569323977
[2025-11-25 19:04:00] 2025-11-26 00:03:26,455 | INFO     | current memory leak: 7.73 B/s (using 1090 data points, chi2=0.09)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,456 | INFO     | could have reported an average CPU frequency of 2965 MHz (41 samples)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,456 | INFO     | ..............................
[2025-11-25 19:04:00] 2025-11-26 00:03:26,456 | INFO     | . Timing measurements:
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | . get job = 0 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | . initial setup = 3 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | . payload setup = 26 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | . stage-in = 0 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | . payload execution = 68359 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | . stage-out = 4 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | . log creation = 1 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,457 | INFO     | ..............................
[2025-11-25 19:04:00] 2025-11-26 00:03:26,562 | INFO     | 
[2025-11-25 19:04:00] 2025-11-26 00:03:26,562 | INFO     | job summary report
[2025-11-25 19:04:00] 2025-11-26 00:03:26,562 | INFO     | --------------------------------------------------
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | PanDA job id: 6895386412
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | task id: 47556149
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | errors: (none)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | pilot state: finished 
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | transexitcode: 0
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | exeerrorcode: 0
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | exeerrordiag: 
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | exitcode: 0
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | exitmsg: OK
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | cpuconsumptiontime: 243360 s
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | nevents: 1000
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | neventsw: 0
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | pid: 1330452
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | pgrp: 1330452
[2025-11-25 19:04:00] 2025-11-26 00:03:26,563 | INFO     | corecount: 9
[2025-11-25 19:04:00] 2025-11-26 00:03:26,564 | INFO     | event service: False
[2025-11-25 19:04:00] 2025-11-26 00:03:26,564 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 20: 2284628, 22: 2284656, 68389: 2342854, 68394: 2351909, 68406: 2352195}
[2025-11-25 19:04:00] 2025-11-26 00:03:26,564 | INFO     | --------------------------------------------------
[2025-11-25 19:04:00] 2025-11-26 00:03:26,564 | INFO     | 
[2025-11-25 19:04:00] 2025-11-26 00:03:26,564 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 19:04:00] 2025-11-26 00:03:26,569 | INFO     | time since job start (68451s) is within the limit (172800.0s)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,602 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:04:00] 2025-11-26 00:03:26,602 | INFO     | job 6895386412 has completed (purged errors)
[2025-11-25 19:04:00] 2025-11-26 00:03:26,602 | INFO     | overall cleanup function is called
[2025-11-25 19:04:00] 2025-11-26 00:03:27,617 | INFO     | --- collectZombieJob: --- 10, [1330452]
[2025-11-25 19:04:00] 2025-11-26 00:03:27,617 | INFO     | zombie collector waiting for pid 1330452
[2025-11-25 19:04:00] 2025-11-26 00:03:27,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:04:00] 2025-11-26 00:03:27,618 | INFO     | collected zombie processes
[2025-11-25 19:04:00] 2025-11-26 00:03:27,618 | INFO     | will attempt to kill all subprocesses of pid=1330452
[2025-11-25 19:04:00] 2025-11-26 00:03:28,118 | INFO     | process IDs to be killed: [1330452] (in reverse order)
[2025-11-25 19:04:00] 2025-11-26 00:03:28,231 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:04:00] 2025-11-26 00:03:28,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:04:00] 2025-11-26 00:03:28,244 | INFO     | did not find any defunct processes belonging to 1330452
[2025-11-25 19:04:00] 2025-11-26 00:03:28,257 | INFO     | did not find any defunct processes belonging to 1330452
[2025-11-25 19:04:00] 2025-11-26 00:03:28,258 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:04:00] 2025-11-26 00:03:28,258 | INFO     | ready for new job
[2025-11-25 19:04:00] 2025-11-26 00:03:28,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:04:00] 2025-11-26 00:03:28,263 | INFO     | ***************************************
[2025-11-25 19:04:00] 2025-11-26 00:03:28,263 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:04:00] 2025-11-26 00:03:28,264 | INFO     | ***************************************
[2025-11-25 19:04:00] 2025-11-26 00:03:28,264 | INFO     | 
[2025-11-25 19:04:00] 2025-11-26 00:03:28,266 | INFO     | architecture information:
[2025-11-25 19:04:00] 2025-11-26 00:03:28,267 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:04:00] 2025-11-26 00:03:28,351 | INFO     | cat /etc/os-release:
[2025-11-25 19:04:00] NAME="CentOS Linux"
[2025-11-25 19:04:00] VERSION="7 (Core)"
[2025-11-25 19:04:00] ID="centos"
[2025-11-25 19:04:00] ID_LIKE="rhel fedora"
[2025-11-25 19:04:00] VERSION_ID="7"
[2025-11-25 19:04:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:04:00] ANSI_COLOR="0;31"
[2025-11-25 19:04:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:04:00] HOME_URL="https://www.centos.org/"
[2025-11-25 19:04:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:04:00] 
[2025-11-25 19:04:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:04:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:04:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:04:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:04:00] 
[2025-11-25 19:04:00] 2025-11-26 00:03:28,352 | INFO     | ***************************************
[2025-11-25 19:04:00] 2025-11-26 00:03:28,855 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 19:04:00] 2025-11-26 00:03:28,886 | INFO     | sufficient remaining disk space (70525124608 B)
[2025-11-25 19:04:00] 2025-11-26 00:03:28,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:04:00] 2025-11-26 00:03:28,887 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:04:00] 2025-11-26 00:03:28,887 | INFO     | update_server=False
[2025-11-25 19:04:00] 2025-11-26 00:03:28,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:04:00] 2025-11-26 00:03:28,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:04:00] 2025-11-26 00:03:28,895 | INFO     | all data control threads have been joined
[2025-11-25 19:04:00] 2025-11-26 00:03:29,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:04:00] 2025-11-26 00:03:29,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:04:00] 2025-11-26 00:03:29,558 | INFO     | aborting loop
[2025-11-25 19:04:00] 2025-11-26 00:03:29,668 | INFO     | all payload control threads have been joined
[2025-11-25 19:04:00] 2025-11-26 00:03:29,858 | INFO     | all job control threads have been joined
[2025-11-25 19:04:00] 2025-11-26 00:03:29,902 | INFO     | [data] control thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:29,916 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,005 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,064 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,508 | INFO     | [job] validate thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,564 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,571 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,711 | INFO     | [payload] control thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,860 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:30,864 | INFO     | [job] control thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:31,006 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:31,327 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:31,390 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:31,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:04:00] 2025-11-26 00:03:32,608 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:32,756 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:04:00] 2025-11-26 00:03:32,953 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:04:00] 2025-11-26 00:03:34,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140106870085440)>', '<ExcThread(monitor, started 140106363025152)>']
[2025-11-25 19:04:00] 2025-11-26 00:03:39,211 | INFO     | all workflow threads have been joined
[2025-11-25 19:04:00] 2025-11-26 00:03:39,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:04:00] 2025-11-26 00:03:39,212 | INFO     | traces error code: 0
[2025-11-25 19:04:00] 2025-11-26 00:03:39,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:04:00] 2025-11-26 00:03:58,649 | INFO     | 68456s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 19:04:00] 2025-11-26 00:04:00,123 | INFO     | PID=1309342 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 19:04:00] 2025-11-26 00:04:00,123 | INFO     | .. there are 31 such processes running
[2025-11-25 19:04:00] 2025-11-26 00:04:00,124 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:04:00] 2025-11-26 00:04:00,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:04:00] 2025-11-26 00:04:00,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:04:00] 2025-11-26 00:04:00,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:04:00] 2025-11-26 00:04:00,124 | INFO     | [monitor] control thread has ended
[2025-11-25 19:04:00] 2025-11-26 00:04:00,271 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:04:00] 2025-11-26 00:04:00,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:04:00] 2025-11-26 00:04:00,276 [wrapper] pilotpid: 1309342
[2025-11-25 19:04:00] 2025-11-26 00:04:00,298 [wrapper] Pilot exit status: 0
[2025-11-25 19:04:00] 2025-11-26 00:04:00,373 [wrapper] pandaids: 6895386412
[2025-11-25 19:04:00] 2025-11-26 00:04:00,454 [wrapper] cleanup supervisor_pilot  515867 1309343
[2025-11-25 19:04:00] 2025-11-26 00:04:00,457 [wrapper] Test setup, not cleaning
[2025-11-25 19:04:00] 2025-11-26 00:04:00,460 [wrapper] apfmon messages muted
[2025-11-25 19:04:00] 2025-11-26 00:04:00,464 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:04:00] 2025-11-26 00:04:00,467 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:04:00]  *** Error codes and diagnostics ***
[2025-11-25 19:04:00]     "exeErrorCode": 0,
[2025-11-25 19:04:00]     "exeErrorDiag": "",
[2025-11-25 19:04:00]     "pilotErrorCode": 0,
[2025-11-25 19:04:00]     "pilotErrorDiag": "",
[2025-11-25 19:04:00]  *** Listing of results directory ***
[2025-11-25 19:04:00] total 1313668
[2025-11-25 19:04:00] -rwx------. 1 boincer umatlas     36292 Nov 24 00:14 runpilot2-wrapper.sh
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:14 queuedata.json
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:04:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:01 run_atlas
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:01 job.xml
[2025-11-25 19:04:00] -rw-r--r--. 2 boincer umatlas 409594712 Nov 25 00:01 EVNT.47483658._001240.pool.root.1
[2025-11-25 19:04:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 19:04:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:01 shared
[2025-11-25 19:04:00] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 00:01 input.tar.gz
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:01 boinc_lockfile
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:01 pandaJob.out
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas        57 Nov 25 00:01 setup.sh.local
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas    991801 Nov 25 00:02 agis_schedconf.cvmfs.json
[2025-11-25 19:04:00] drwx------. 5 boincer umatlas      4096 Nov 25 00:02 pilot3
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas       533 Nov 25 18:52 boinc_task_state.xml
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas 908148248 Nov 25 19:02 HITS.47556149._002265.pool.root.1
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas      6845 Nov 25 19:02 init_data.xml
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas      1064 Nov 25 19:03 memory_monitor_summary.json
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas   1516240 Nov 25 19:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas   2394906 Nov 25 19:03 log.47556149._002265.job.log.tgz.1
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas      8631 Nov 25 19:03 heartbeat.json
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas        29 Nov 25 19:03 wrapper_checkpoint.txt
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 19:03 boinc_mmap_file
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas        95 Nov 25 19:04 pilot_heartbeat.json
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas       939 Nov 25 19:04 pilotlog.txt
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas   9374556 Nov 25 19:04 log.47556149._002265.job.log.1
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas       353 Nov 25 19:04 output.list
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas       620 Nov 25 19:04 runtime_log
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas  11786240 Nov 25 19:04 result.tar.gz
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 19:04 runtime_log.err
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas       662 Nov 25 19:04 jdoMDmn5dh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4vIKDmCabRcm.diag
[2025-11-25 19:04:00] -rw-r--r--. 1 boincer umatlas     21365 Nov 25 19:04 stderr.txt
[2025-11-25 19:04:00] HITS file was successfully produced:
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas 908148248 Nov 25 19:02 shared/HITS.pool.root.1
[2025-11-25 19:04:00]  *** Contents of shared directory: ***
[2025-11-25 19:04:00] total 1298976
[2025-11-25 19:04:00] -rw-r--r--. 2 boincer umatlas 409594712 Nov 25 00:01 ATLAS.root_0
[2025-11-25 19:04:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 19:04:00] -rw-r--r--. 2 boincer umatlas    590097 Nov 25 00:01 input.tar.gz
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas 908148248 Nov 25 19:02 HITS.pool.root.1
[2025-11-25 19:04:00] -rw-------. 1 boincer umatlas  11786240 Nov 25 19:04 result.tar.gz
19:04:02 (1301676): run_atlas exited; CPU time 244352.036119
19:04:02 (1301676): called boinc_finish(0)

</stderr_txt>
]]>

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