Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:16 (166155): wrapper (7.7.26015): starting
00:03:16 (166155): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:03:16] Arguments: --nthreads 9
[2025-11-25 00:03:16] Threads: 9
[2025-11-25 00:03:16] Checking for CVMFS
[2025-11-25 00:03:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:17] 2.13.3.0 9702 28167 315936 153270 3 191 21542266 32935936 28691 16776704 0 144421198 99.699 103115533 32935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:17] CVMFS is ok
[2025-11-25 00:03:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:17] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:17] Checking for apptainer binary...
[2025-11-25 00:03:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:17] Running /usr/bin/apptainer --version
[2025-11-25 00:03:17] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:18] c-4-37.aglt2.org
[2025-11-25 00:03:18] apptainer works
[2025-11-25 00:03:18] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:03:18] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:03:18] Starting ATLAS job with PandaID=6895386456
[2025-11-25 00:03:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:14:18]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:14:18] 2025-11-25 18:13:27,390 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:14:18] 2025-11-25 18:13:27,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:14:18] 2025-11-25 18:13:27,413 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:14:18] 2025-11-25 18:13:27,414 | INFO     | sum of square deviations: 144904791308.98444
[2025-11-25 13:14:18] 2025-11-25 18:13:27,443 | INFO     | sum of deviations: 1505281569187.922
[2025-11-25 13:14:18] 2025-11-25 18:13:27,444 | INFO     | mean x: 1764070728.2242267
[2025-11-25 13:14:18] 2025-11-25 18:13:27,444 | INFO     | mean y: 3049760.1211340204
[2025-11-25 13:14:18] 2025-11-25 18:13:27,444 | INFO     | intersect: -18322245973.389935
[2025-11-25 13:14:18] 2025-11-25 18:13:27,445 | INFO     | chi2: 10.522404806723365
[2025-11-25 13:14:18] 2025-11-25 18:13:27,446 | INFO     | sum of square deviations: 142122337904.02316
[2025-11-25 13:14:18] 2025-11-25 18:13:27,461 | INFO     | sum of deviations: 1793438320527.1438
[2025-11-25 13:14:18] 2025-11-25 18:13:27,461 | INFO     | mean x: 1764070575.7354085
[2025-11-25 13:14:18] 2025-11-25 18:13:27,461 | INFO     | mean y: 3065553.0350194555
[2025-11-25 13:14:18] 2025-11-25 18:13:27,462 | INFO     | intersect: -22257698077.062176
[2025-11-25 13:14:18] 2025-11-25 18:13:27,463 | INFO     | chi2: 7.030527393939084
[2025-11-25 13:14:18] 2025-11-25 18:13:27,464 | INFO     | current chi2=7.030527393939084 (change=33.185165149254864 %)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,465 | INFO     | sum of square deviations: 139375745636.3671
[2025-11-25 13:14:18] 2025-11-25 18:13:27,480 | INFO     | sum of deviations: 2002418842303.2725
[2025-11-25 13:14:18] 2025-11-25 18:13:27,480 | INFO     | mean x: 1764070423.2467363
[2025-11-25 13:14:18] 2025-11-25 18:13:27,480 | INFO     | mean y: 3077140.7075718017
[2025-11-25 13:14:18] 2025-11-25 18:13:27,480 | INFO     | intersect: -25341417617.191452
[2025-11-25 13:14:18] 2025-11-25 18:13:27,481 | INFO     | chi2: 4.886077491086753
[2025-11-25 13:14:18] 2025-11-25 18:13:27,481 | INFO     | current chi2=4.886077491086753 (change=30.501977770558586 %)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,482 | INFO     | sum of square deviations: 136664035521.43762
[2025-11-25 13:14:18] 2025-11-25 18:13:27,497 | INFO     | sum of deviations: 2028500966872.9546
[2025-11-25 13:14:18] 2025-11-25 18:13:27,497 | INFO     | mean x: 1764070270.7371879
[2025-11-25 13:14:18] 2025-11-25 18:13:27,497 | INFO     | mean y: 3078598.5597897503
[2025-11-25 13:14:18] 2025-11-25 18:13:27,497 | INFO     | intersect: -26180973673.633625
[2025-11-25 13:14:18] 2025-11-25 18:13:27,498 | INFO     | chi2: 4.68844239057865
[2025-11-25 13:14:18] 2025-11-25 18:13:27,499 | INFO     | current chi2=4.68844239057865 (change=4.04486217970615 %)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,499 | INFO     | right removable region: 760
[2025-11-25 13:14:18] 2025-11-25 18:13:27,500 | INFO     | sum of square deviations: 142121521724.0232
[2025-11-25 13:14:18] 2025-11-25 18:13:27,515 | INFO     | sum of deviations: 1201399771339.128
[2025-11-25 13:14:18] 2025-11-25 18:13:27,515 | INFO     | mean x: 1764070880.7354085
[2025-11-25 13:14:18] 2025-11-25 18:13:27,515 | INFO     | mean y: 3066404.878080415
[2025-11-25 13:14:18] 2025-11-25 18:13:27,515 | INFO     | intersect: -14909202525.488245
[2025-11-25 13:14:18] 2025-11-25 18:13:27,516 | INFO     | chi2: 7.0372569872382025
[2025-11-25 13:14:18] 2025-11-25 18:13:27,516 | INFO     | current chi2=7.0372569872382025 (change=33.12121025089533 %)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,517 | INFO     | sum of square deviations: 139374206977.35104
[2025-11-25 13:14:18] 2025-11-25 18:13:27,533 | INFO     | sum of deviations: 1042724748343.1282
[2025-11-25 13:14:18] 2025-11-25 18:13:27,533 | INFO     | mean x: 1764071033.2441254
[2025-11-25 13:14:18] 2025-11-25 18:13:27,533 | INFO     | mean y: 3075201.2506527416
[2025-11-25 13:14:18] 2025-11-25 18:13:27,533 | INFO     | intersect: -13194779438.365704
[2025-11-25 13:14:18] 2025-11-25 18:13:27,534 | INFO     | chi2: 6.088266532050397
[2025-11-25 13:14:18] 2025-11-25 18:13:27,535 | INFO     | current chi2=6.088266532050397 (change=13.485232341362039 %)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,535 | INFO     | left removable region: 20
[2025-11-25 13:14:18] 2025-11-25 18:13:27,536 | INFO     | sum of square deviations: 125659017985.02219
[2025-11-25 13:14:18] 2025-11-25 18:13:27,554 | INFO     | sum of deviations: 1440619674965.2944
[2025-11-25 13:14:18] 2025-11-25 18:13:27,554 | INFO     | mean x: 1764070850.2675676
[2025-11-25 13:14:18] 2025-11-25 18:13:27,554 | INFO     | mean y: 3111887.958108108
[2025-11-25 13:14:18] 2025-11-25 18:13:27,554 | INFO     | intersect: -20221104532.63439
[2025-11-25 13:14:18] 2025-11-25 18:13:27,555 | INFO     | chi2: 0.064266283836218
[2025-11-25 13:14:18] 2025-11-25 18:13:27,555 | INFO     | current memory leak: 11.46 B/s (using 740 data points, chi2=0.06)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,560 | INFO     | could have reported an average CPU frequency of 2599 MHz (29 samples)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,560 | INFO     | ..............................
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . Timing measurements:
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . get job = 0 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . initial setup = 4 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . payload setup = 12 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . stage-in = 0 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . payload execution = 47312 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . stage-out = 6 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | . log creation = 0 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,561 | INFO     | ..............................
[2025-11-25 13:14:18] 2025-11-25 18:13:27,703 | INFO     | 
[2025-11-25 13:14:18] 2025-11-25 18:13:27,704 | INFO     | job summary report
[2025-11-25 13:14:18] 2025-11-25 18:13:27,704 | INFO     | --------------------------------------------------
[2025-11-25 13:14:18] 2025-11-25 18:13:27,704 | INFO     | PanDA job id: 6895386456
[2025-11-25 13:14:18] 2025-11-25 18:13:27,704 | INFO     | task id: 47556149
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | errors: (none)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | pilot state: finished 
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | transexitcode: 0
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | exeerrorcode: 0
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | exeerrordiag: 
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | exitcode: 0
[2025-11-25 13:14:18] 2025-11-25 18:13:27,705 | INFO     | exitmsg: OK
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | cpuconsumptiontime: 292328 s
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | nevents: 1000
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | neventsw: 0
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | pid: 177528
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | pgrp: 177528
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | corecount: 9
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | event service: False
[2025-11-25 13:14:18] 2025-11-25 18:13:27,706 | INFO     | sizes: {0: 2284138, 1: 2284337, 12: 2284337, 15: 2284627, 23: 2284655, 47329: 2331379, 47330: 2331506, 47337: 2340589, 47339: 2340645, 47347: 2340891}
[2025-11-25 13:14:18] 2025-11-25 18:13:27,707 | INFO     | --------------------------------------------------
[2025-11-25 13:14:18] 2025-11-25 18:13:27,707 | INFO     | 
[2025-11-25 13:14:18] 2025-11-25 18:13:27,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 13:14:18] 2025-11-25 18:13:27,771 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,774 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:14:18] 2025-11-25 18:13:27,774 | INFO     | job 6895386456 has completed (purged errors)
[2025-11-25 13:14:18] 2025-11-25 18:13:27,774 | INFO     | overall cleanup function is called
[2025-11-25 13:14:18] 2025-11-25 18:13:28,805 | INFO     | --- collectZombieJob: --- 10, [177528]
[2025-11-25 13:14:18] 2025-11-25 18:13:28,805 | INFO     | zombie collector waiting for pid 177528
[2025-11-25 13:14:18] 2025-11-25 18:13:28,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:14:18] 2025-11-25 18:13:28,805 | INFO     | collected zombie processes
[2025-11-25 13:14:18] 2025-11-25 18:13:28,806 | INFO     | will attempt to kill all subprocesses of pid=177528
[2025-11-25 13:14:18] 2025-11-25 18:13:29,779 | INFO     | process IDs to be killed: [177528] (in reverse order)
[2025-11-25 13:14:18] 2025-11-25 18:13:29,949 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:14:18] 2025-11-25 18:13:29,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:14:18] 2025-11-25 18:13:30,016 | INFO     | did not find any defunct processes belonging to 177528
[2025-11-25 13:14:18] 2025-11-25 18:13:30,071 | INFO     | did not find any defunct processes belonging to 177528
[2025-11-25 13:14:18] 2025-11-25 18:13:30,081 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:14:18] 2025-11-25 18:13:30,081 | INFO     | ready for new job
[2025-11-25 13:14:18] 2025-11-25 18:13:30,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:14:18] 2025-11-25 18:13:30,090 | INFO     | ***************************************
[2025-11-25 13:14:18] 2025-11-25 18:13:30,090 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:14:18] 2025-11-25 18:13:30,090 | INFO     | ***************************************
[2025-11-25 13:14:18] 2025-11-25 18:13:30,090 | INFO     | 
[2025-11-25 13:14:18] 2025-11-25 18:13:30,096 | INFO     | architecture information:
[2025-11-25 13:14:18] 2025-11-25 18:13:30,101 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:14:18] 2025-11-25 18:13:30,140 | INFO     | cat /etc/os-release:
[2025-11-25 13:14:18] NAME="CentOS Linux"
[2025-11-25 13:14:18] VERSION="7 (Core)"
[2025-11-25 13:14:18] ID="centos"
[2025-11-25 13:14:18] ID_LIKE="rhel fedora"
[2025-11-25 13:14:18] VERSION_ID="7"
[2025-11-25 13:14:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:14:18] ANSI_COLOR="0;31"
[2025-11-25 13:14:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:14:18] HOME_URL="https://www.centos.org/"
[2025-11-25 13:14:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:14:18] 
[2025-11-25 13:14:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:14:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:14:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:14:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:14:18] 
[2025-11-25 13:14:18] 2025-11-25 18:13:30,141 | INFO     | ***************************************
[2025-11-25 13:14:18] 2025-11-25 18:13:30,647 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 13:14:18] 2025-11-25 18:13:30,757 | INFO     | sufficient remaining disk space (71555874816 B)
[2025-11-25 13:14:18] 2025-11-25 18:13:30,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:14:18] 2025-11-25 18:13:30,758 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:14:18] 2025-11-25 18:13:30,758 | INFO     | update_server=False
[2025-11-25 13:14:18] 2025-11-25 18:13:30,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:14:18] 2025-11-25 18:13:30,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:14:18] 2025-11-25 18:13:30,759 | INFO     | aborting loop
[2025-11-25 13:14:18] 2025-11-25 18:13:30,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:14:18] 2025-11-25 18:13:30,926 | INFO     | all data control threads have been joined
[2025-11-25 13:14:18] 2025-11-25 18:13:31,333 | INFO     | all job control threads have been joined
[2025-11-25 13:14:18] 2025-11-25 18:13:31,574 | INFO     | all payload control threads have been joined
[2025-11-25 13:14:18] 2025-11-25 18:13:31,764 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:31,771 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:31,821 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:31,912 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:31,934 | INFO     | [data] control thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,247 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,335 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,339 | INFO     | [job] control thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,565 | INFO     | [job] validate thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,566 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,582 | INFO     | [payload] control thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,767 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:32,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:14:18] 2025-11-25 18:13:33,095 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:33,800 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:13:33,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:14:18] 2025-11-25 18:13:37,868 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:14:18] 2025-11-25 18:14:00,664 | INFO     | PID=170040 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 13:14:18] 2025-11-25 18:14:00,665 | INFO     | .. there are 43 such processes running
[2025-11-25 13:14:18] 2025-11-25 18:14:00,665 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:14:18] 2025-11-25 18:14:00,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:14:18] 2025-11-25 18:14:00,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:14:18] 2025-11-25 18:14:11,328 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:14:18] 2025-11-25 18:14:13,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982393923392)>', '<ExcThread(monitor, started 139981767042816)>']
[2025-11-25 13:14:18] 2025-11-25 18:14:13,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:14:18] 2025-11-25 18:14:13,744 | INFO     | [monitor] control thread has ended
[2025-11-25 13:14:18] 2025-11-25 18:14:18,150 | INFO     | all workflow threads have been joined
[2025-11-25 13:14:18] 2025-11-25 18:14:18,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:14:18] 2025-11-25 18:14:18,150 | INFO     | traces error code: 0
[2025-11-25 13:14:18] 2025-11-25 18:14:18,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:14:18] 2025-11-25 18:14:18,390 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:14:18] 2025-11-25 18:14:18,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:14:18] 2025-11-25 18:14:18,397 [wrapper] pilotpid: 170040
[2025-11-25 13:14:18] 2025-11-25 18:14:18,400 [wrapper] Pilot exit status: 0
[2025-11-25 13:14:18] 2025-11-25 18:14:18,423 [wrapper] pandaids: 6895386456
[2025-11-25 13:14:18] 2025-11-25 18:14:18,511 [wrapper] cleanup supervisor_pilot 2674066 170041
[2025-11-25 13:14:18] 2025-11-25 18:14:18,515 [wrapper] Test setup, not cleaning
[2025-11-25 13:14:18] 2025-11-25 18:14:18,518 [wrapper] apfmon messages muted
[2025-11-25 13:14:18] 2025-11-25 18:14:18,520 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:14:18] 2025-11-25 18:14:18,523 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:14:18]  *** Error codes and diagnostics ***
[2025-11-25 13:14:18]     "exeErrorCode": 0,
[2025-11-25 13:14:18]     "exeErrorDiag": "",
[2025-11-25 13:14:18]     "pilotErrorCode": 0,
[2025-11-25 13:14:18]     "pilotErrorDiag": "",
[2025-11-25 13:14:18]  *** Listing of results directory ***
[2025-11-25 13:14:18] total 1312968
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:14 pilot3.tar.gz
[2025-11-25 13:14:18] -rwx------. 1 boincer umatlas     36292 Nov 24 00:25 runpilot2-wrapper.sh
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:25 queuedata.json
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:14:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 13:14:18] -rw-r--r--. 2 boincer umatlas 408258873 Nov 25 00:03 EVNT.47483658._001244.pool.root.1
[2025-11-25 13:14:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 13:14:18] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:03 input.tar.gz
[2025-11-25 13:14:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:03 pandaJob.out
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas    991801 Nov 25 00:03 agis_schedconf.cvmfs.json
[2025-11-25 13:14:18] drwx------. 5 boincer umatlas      4096 Nov 25 00:03 pilot3
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas       533 Nov 25 12:59 boinc_task_state.xml
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 13:09 init_data.xml
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas 915888648 Nov 25 13:12 HITS.47556149._002309.pool.root.1
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas      1056 Nov 25 13:13 memory_monitor_summary.json
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas        95 Nov 25 13:13 pilot_heartbeat.json
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas   1516240 Nov 25 13:13 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas   2110154 Nov 25 13:13 log.47556149._002309.job.log.tgz.1
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas      8615 Nov 25 13:13 heartbeat.json
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 13:14 boinc_mmap_file
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas        29 Nov 25 13:14 wrapper_checkpoint.txt
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas      4823 Nov 25 13:14 pilotlog.txt
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas   6095965 Nov 25 13:14 log.47556149._002309.job.log.1
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas       353 Nov 25 13:14 output.list
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas       620 Nov 25 13:14 runtime_log
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas   8222720 Nov 25 13:14 result.tar.gz
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas       658 Nov 25 13:14 W0kLDmiFeh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTwIKDmgPLLVn.diag
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 13:14 runtime_log.err
[2025-11-25 13:14:18] -rw-r--r--. 1 boincer umatlas     21155 Nov 25 13:14 stderr.txt
[2025-11-25 13:14:18] HITS file was successfully produced:
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas 915888648 Nov 25 13:12 shared/HITS.pool.root.1
[2025-11-25 13:14:18]  *** Contents of shared directory: ***
[2025-11-25 13:14:18] total 1301748
[2025-11-25 13:14:18] -rw-r--r--. 2 boincer umatlas 408258873 Nov 25 00:03 ATLAS.root_0
[2025-11-25 13:14:18] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:03 input.tar.gz
[2025-11-25 13:14:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas 915888648 Nov 25 13:12 HITS.pool.root.1
[2025-11-25 13:14:18] -rw-------. 1 boincer umatlas   8222720 Nov 25 13:14 result.tar.gz
13:14:40 (166155): run_atlas exited; CPU time 293712.901749
13:14:40 (166155): called boinc_finish(0)

</stderr_txt>
]]>

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