Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:53 (2324883): wrapper (7.7.26015): starting
00:02:53 (2324883): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:02:53] Arguments: --nthreads 12
[2025-11-25 00:02:53] Threads: 12
[2025-11-25 00:02:53] Checking for CVMFS
[2025-11-25 00:02:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:02:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:02:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:02:54] 2.13.2.0 5195 34679 160056 153270 3 544 36878779 40960001 22581 16776704 0 66416348 99.771 35355846 37711 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:02:54] CVMFS is ok
[2025-11-25 00:02:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:02:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:02:54] Further information can be found at the LHC@home message board.
[2025-11-25 00:02:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:02:54] Checking for apptainer binary...
[2025-11-25 00:02:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:02:54] Running /usr/bin/apptainer --version
[2025-11-25 00:02:54] apptainer version 1.4.4-1.el9
[2025-11-25 00:02:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:02:54] c-212-19.aglt2.org
[2025-11-25 00:02:54] apptainer works
[2025-11-25 00:02:54] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:02:54] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:02:54] Starting ATLAS job with PandaID=6895361204
[2025-11-25 00:02:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:24:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:24:40] 2025-11-26 12:24:01,184 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 07:24:40] 2025-11-26 12:24:01,201 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3108.876135416666
[2025-11-26 07:24:40] 2025-11-26 12:24:01,273 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6895361204/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:24:40] 2025-11-26 12:24:01,274 | INFO     | extracted standard info from prmon json
[2025-11-26 07:24:40] 2025-11-26 12:24:01,274 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:24:40] 2025-11-26 12:24:01,274 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:24:40] 2025-11-26 12:24:01,348 | INFO     | time since job start (112848s) is within the limit (172800.0s)
[2025-11-26 07:24:40] 2025-11-26 12:24:01,402 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:24:40] 2025-11-26 12:24:01,418 | INFO     | sum of square deviations: 1960254537486.4697
[2025-11-26 07:24:40] 2025-11-26 12:24:01,722 | INFO     | monitor loop #7009: job 0:6895361204 is in state 'finished'
[2025-11-26 07:24:40] 2025-11-26 12:24:01,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 07:24:40] 2025-11-26 12:24:01,759 | INFO     | sum of deviations: 33564451426655.652
[2025-11-26 07:24:40] 2025-11-26 12:24:01,760 | INFO     | mean x: 1764103395.9361818
[2025-11-26 07:24:40] 2025-11-26 12:24:01,760 | INFO     | mean y: 3993768.302325581
[2025-11-26 07:24:40] 2025-11-26 12:24:01,760 | INFO     | intersect: -30201860426.746033
[2025-11-26 07:24:40] 2025-11-26 12:24:01,762 | INFO     | chi2: 14.531758804081825
[2025-11-26 07:24:40] 2025-11-26 12:24:01,764 | INFO     | sum of square deviations: 1944397458733.2466
[2025-11-26 07:24:40] 2025-11-26 12:24:01,967 | INFO     | sum of deviations: 34484744547788.42
[2025-11-26 07:24:40] 2025-11-26 12:24:01,967 | INFO     | mean x: 1764103243.444143
[2025-11-26 07:24:40] 2025-11-26 12:24:01,967 | INFO     | mean y: 4002619.290130152
[2025-11-26 07:24:40] 2025-11-26 12:24:01,967 | INFO     | intersect: -31283144683.2626
[2025-11-26 07:24:40] 2025-11-26 12:24:01,969 | INFO     | chi2: 10.613698819711729
[2025-11-26 07:24:40] 2025-11-26 12:24:01,969 | INFO     | current chi2=10.613698819711729 (change=26.96204937883742 %)
[2025-11-26 07:24:40] 2025-11-26 12:24:01,970 | INFO     | sum of square deviations: 1928626149029.7888
[2025-11-26 07:24:40] 2025-11-26 12:24:02,031 | INFO     | sum of deviations: 35408286309137.3
[2025-11-26 07:24:40] 2025-11-26 12:24:02,032 | INFO     | mean x: 1764103090.952148
[2025-11-26 07:24:40] 2025-11-26 12:24:02,032 | INFO     | mean y: 4011547.4915715065
[2025-11-26 07:24:40] 2025-11-26 12:24:02,032 | INFO     | intersect: -32383741441.697487
[2025-11-26 07:24:40] 2025-11-26 12:24:02,033 | INFO     | chi2: 6.696336676516951
[2025-11-26 07:24:40] 2025-11-26 12:24:02,033 | INFO     | current chi2=6.696336676516951 (change=36.90854818604297 %)
[2025-11-26 07:24:40] 2025-11-26 12:24:02,035 | INFO     | sum of square deviations: 1912939253814.745
[2025-11-26 07:24:40] 2025-11-26 12:24:02,251 | INFO     | sum of deviations: 35452012163462.18
[2025-11-26 07:24:40] 2025-11-26 12:24:02,251 | INFO     | mean x: 1764102938.4547436
[2025-11-26 07:24:40] 2025-11-26 12:24:02,251 | INFO     | mean y: 4011969.4721919303
[2025-11-26 07:24:40] 2025-11-26 12:24:02,252 | INFO     | intersect: -32689654965.836357
[2025-11-26 07:24:40] 2025-11-26 12:24:02,253 | INFO     | chi2: 6.267619451356481
[2025-11-26 07:24:40] 2025-11-26 12:24:02,253 | INFO     | current chi2=6.267619451356481 (change=6.402265087176956 %)
[2025-11-26 07:24:40] 2025-11-26 12:24:02,253 | INFO     | right removable region: 1833
[2025-11-26 07:24:40] 2025-11-26 12:24:02,263 | INFO     | sum of square deviations: 1944394147043.248
[2025-11-26 07:24:40] 2025-11-26 12:24:02,526 | INFO     | sum of deviations: 32651324463716.83
[2025-11-26 07:24:40] 2025-11-26 12:24:02,526 | INFO     | mean x: 1764103548.444143
[2025-11-26 07:24:40] 2025-11-26 12:24:02,526 | INFO     | mean y: 4002546.464208243
[2025-11-26 07:24:40] 2025-11-26 12:24:02,527 | INFO     | intersect: -29619784089.303085
[2025-11-26 07:24:40] 2025-11-26 12:24:02,528 | INFO     | chi2: 11.673899612164387
[2025-11-26 07:24:40] 2025-11-26 12:24:02,528 | INFO     | current chi2=11.673899612164387 (change=19.66629938225161 %)
[2025-11-26 07:24:40] 2025-11-26 12:24:02,528 | INFO     | left removable region: 10
[2025-11-26 07:24:40] 2025-11-26 12:24:02,542 | INFO     | sum of square deviations: 1878724100504.2803
[2025-11-26 07:24:40] 2025-11-26 12:24:02,815 | INFO     | sum of deviations: 34046103385264.64
[2025-11-26 07:24:40] 2025-11-26 12:24:02,825 | INFO     | mean x: 1764103212.9692814
[2025-11-26 07:24:40] 2025-11-26 12:24:02,825 | INFO     | mean y: 4024996.8513439386
[2025-11-26 07:24:40] 2025-11-26 12:24:02,825 | INFO     | intersect: -31964926886.455185
[2025-11-26 07:24:40] 2025-11-26 12:24:02,827 | INFO     | chi2: 3.0925593058992185
[2025-11-26 07:24:40] 2025-11-26 12:24:02,827 | INFO     | current memory leak: 18.12 B/s (using 1823 data points, chi2=3.09)
[2025-11-26 07:24:40] 2025-11-26 12:24:02,852 | INFO     | could have reported an average CPU frequency of 3124 MHz (65 samples)
[2025-11-26 07:24:40] 2025-11-26 12:24:02,853 | INFO     | ..............................
[2025-11-26 07:24:40] 2025-11-26 12:24:02,853 | INFO     | . Timing measurements:
[2025-11-26 07:24:40] 2025-11-26 12:24:02,853 | INFO     | . get job = 0 s
[2025-11-26 07:24:40] 2025-11-26 12:24:02,859 | INFO     | . initial setup = 2 s
[2025-11-26 07:24:40] 2025-11-26 12:24:02,859 | INFO     | . payload setup = 9 s
[2025-11-26 07:24:40] 2025-11-26 12:24:02,859 | INFO     | . stage-in = 0 s
[2025-11-26 07:24:40] 2025-11-26 12:24:02,859 | INFO     | . payload execution = 112786 s
[2025-11-26 07:24:40] 2025-11-26 12:24:02,859 | INFO     | . stage-out = 6 s
[2025-11-26 07:24:40] 2025-11-26 12:24:02,859 | INFO     | . log creation = 1 s
[2025-11-26 07:24:40] 2025-11-26 12:24:02,859 | INFO     | ..............................
[2025-11-26 07:24:40] 2025-11-26 12:24:03,126 | INFO     | 
[2025-11-26 07:24:40] 2025-11-26 12:24:03,127 | INFO     | job summary report
[2025-11-26 07:24:40] 2025-11-26 12:24:03,127 | INFO     | --------------------------------------------------
[2025-11-26 07:24:40] 2025-11-26 12:24:03,127 | INFO     | PanDA job id: 6895361204
[2025-11-26 07:24:40] 2025-11-26 12:24:03,127 | INFO     | task id: 47556149
[2025-11-26 07:24:40] 2025-11-26 12:24:03,127 | INFO     | errors: (none)
[2025-11-26 07:24:40] 2025-11-26 12:24:03,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:24:40] 2025-11-26 12:24:03,127 | INFO     | pilot state: finished 
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | transexitcode: 0
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | exeerrorcode: 0
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | exeerrordiag: 
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | exitcode: 0
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | exitmsg: OK
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | cpuconsumptiontime: 226478 s
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | nevents: 1000
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | neventsw: 0
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | pid: 2349546
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | pgrp: 2349546
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | corecount: 12
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | event service: False
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | sizes: {0: 2283981, 1: 2284236, 8: 2284498, 12: 2284526, 112801: 2361680, 112808: 2370679, 112810: 2370863, 112831: 2371205}
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | --------------------------------------------------
[2025-11-26 07:24:40] 2025-11-26 12:24:03,128 | INFO     | 
[2025-11-26 07:24:40] 2025-11-26 12:24:03,129 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 07:24:40] 2025-11-26 12:24:03,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:24:40] 2025-11-26 12:24:03,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:24:40] 2025-11-26 12:24:03,372 | INFO     | job 6895361204 has completed (purged errors)
[2025-11-26 07:24:40] 2025-11-26 12:24:03,398 | INFO     | overall cleanup function is called
[2025-11-26 07:24:40] 2025-11-26 12:24:04,502 | INFO     | --- collectZombieJob: --- 10, [2349546]
[2025-11-26 07:24:40] 2025-11-26 12:24:04,502 | INFO     | zombie collector waiting for pid 2349546
[2025-11-26 07:24:40] 2025-11-26 12:24:04,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:24:40] 2025-11-26 12:24:04,502 | INFO     | collected zombie processes
[2025-11-26 07:24:40] 2025-11-26 12:24:04,502 | INFO     | will attempt to kill all subprocesses of pid=2349546
[2025-11-26 07:24:40] 2025-11-26 12:24:05,011 | INFO     | process IDs to be killed: [2349546] (in reverse order)
[2025-11-26 07:24:40] 2025-11-26 12:24:05,961 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:24:40] 2025-11-26 12:24:05,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:24:40] 2025-11-26 12:24:06,027 | INFO     | did not find any defunct processes belonging to 2349546
[2025-11-26 07:24:40] 2025-11-26 12:24:06,147 | INFO     | did not find any defunct processes belonging to 2349546
[2025-11-26 07:24:40] 2025-11-26 12:24:06,162 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:24:40] 2025-11-26 12:24:06,162 | INFO     | ready for new job
[2025-11-26 07:24:40] 2025-11-26 12:24:06,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:24:40] 2025-11-26 12:24:06,205 | INFO     | ***************************************
[2025-11-26 07:24:40] 2025-11-26 12:24:06,206 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:24:40] 2025-11-26 12:24:06,206 | INFO     | ***************************************
[2025-11-26 07:24:40] 2025-11-26 12:24:06,206 | INFO     | 
[2025-11-26 07:24:40] 2025-11-26 12:24:06,234 | INFO     | architecture information:
[2025-11-26 07:24:40] 2025-11-26 12:24:06,259 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:24:40] 2025-11-26 12:24:06,429 | INFO     | cat /etc/os-release:
[2025-11-26 07:24:40] NAME="CentOS Linux"
[2025-11-26 07:24:40] VERSION="7 (Core)"
[2025-11-26 07:24:40] ID="centos"
[2025-11-26 07:24:40] ID_LIKE="rhel fedora"
[2025-11-26 07:24:40] VERSION_ID="7"
[2025-11-26 07:24:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:24:40] ANSI_COLOR="0;31"
[2025-11-26 07:24:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:24:40] HOME_URL="https://www.centos.org/"
[2025-11-26 07:24:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:24:40] 
[2025-11-26 07:24:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:24:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:24:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:24:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:24:40] 
[2025-11-26 07:24:40] 2025-11-26 12:24:06,429 | INFO     | ***************************************
[2025-11-26 07:24:40] 2025-11-26 12:24:06,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 07:24:40] 2025-11-26 12:24:07,082 | INFO     | sufficient remaining disk space (120377573376 B)
[2025-11-26 07:24:40] 2025-11-26 12:24:07,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:24:40] 2025-11-26 12:24:07,087 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:24:40] 2025-11-26 12:24:07,087 | INFO     | update_server=False
[2025-11-26 07:24:40] 2025-11-26 12:24:07,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:24:40] 2025-11-26 12:24:07,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:24:40] 2025-11-26 12:24:07,156 | INFO     | all data control threads have been joined
[2025-11-26 07:24:40] 2025-11-26 12:24:07,261 | INFO     | all payload control threads have been joined
[2025-11-26 07:24:40] 2025-11-26 12:24:07,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:24:40] 2025-11-26 12:24:07,766 | INFO     | aborting loop
[2025-11-26 07:24:40] 2025-11-26 12:24:07,901 | INFO     | all job control threads have been joined
[2025-11-26 07:24:40] 2025-11-26 12:24:08,093 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,097 | INFO     | [job] validate thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:24:40] 2025-11-26 12:24:08,162 | INFO     | [data] control thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,267 | INFO     | [payload] control thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:24:40] 2025-11-26 12:24:08,493 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,772 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,798 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:08,907 | INFO     | [job] control thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:09,086 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:09,153 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:09,159 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:09,488 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:09,593 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:10,482 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:11,099 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:24:40] 2025-11-26 12:24:34,099 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:24:40] 2025-11-26 12:24:34,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444247148352)>', '<ExcThread(monitor, started 140443450849024)>']
[2025-11-26 07:24:40] 2025-11-26 12:24:35,050 | INFO     | PID=2334646 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:24:40] 2025-11-26 12:24:35,050 | INFO     | .. there are 19 such processes running
[2025-11-26 07:24:40] 2025-11-26 12:24:35,051 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:24:40] 2025-11-26 12:24:35,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:24:40] 2025-11-26 12:24:35,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:24:40] 2025-11-26 12:24:35,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:24:40] 2025-11-26 12:24:35,052 | INFO     | [monitor] control thread has ended
[2025-11-26 07:24:40] 2025-11-26 12:24:39,521 | INFO     | all workflow threads have been joined
[2025-11-26 07:24:40] 2025-11-26 12:24:39,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:24:40] 2025-11-26 12:24:39,521 | INFO     | traces error code: 0
[2025-11-26 07:24:40] 2025-11-26 12:24:39,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:24:40] 2025-11-26 12:24:40,024 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:24:40] 2025-11-26 12:24:40,078 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:24:40] 2025-11-26 12:24:40,107 [wrapper] pilotpid: 2334646
[2025-11-26 07:24:40] 2025-11-26 12:24:40,120 [wrapper] Pilot exit status: 0
[2025-11-26 07:24:40] 2025-11-26 12:24:40,218 [wrapper] pandaids: 6895361204
[2025-11-26 07:24:40] 2025-11-26 12:24:40,455 [wrapper] cleanup supervisor_pilot 3175358 2334647
[2025-11-26 07:24:40] 2025-11-26 12:24:40,459 [wrapper] Test setup, not cleaning
[2025-11-26 07:24:40] 2025-11-26 12:24:40,462 [wrapper] apfmon messages muted
[2025-11-26 07:24:40] 2025-11-26 12:24:40,465 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:24:40] 2025-11-26 12:24:40,471 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:24:40]  *** Error codes and diagnostics ***
[2025-11-26 07:24:40]     "exeErrorCode": 0,
[2025-11-26 07:24:40]     "exeErrorDiag": "",
[2025-11-26 07:24:40]     "pilotErrorCode": 0,
[2025-11-26 07:24:40]     "pilotErrorDiag": "",
[2025-11-26 07:24:40]  *** Listing of results directory ***
[2025-11-26 07:24:40] total 1352052
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 08:42 pilot3.tar.gz
[2025-11-26 07:24:40] -rwx------. 1 boincer umatlas     36292 Nov 23 08:57 runpilot2-wrapper.sh
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 08:57 queuedata.json
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:24:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:02 run_atlas
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:02 job.xml
[2025-11-26 07:24:40] -rw-r--r--. 2 boincer umatlas 411872283 Nov 25 00:02 EVNT.47483658._001167.pool.root.1
[2025-11-26 07:24:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:02 start_atlas.sh
[2025-11-26 07:24:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:02 shared
[2025-11-26 07:24:40] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:02 input.tar.gz
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:02 boinc_lockfile
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 00:02 pandaJob.out
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas        57 Nov 25 00:02 setup.sh.local
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas    991801 Nov 25 00:03 agis_schedconf.cvmfs.json
[2025-11-26 07:24:40] drwx------. 5 boincer umatlas      4096 Nov 25 00:03 pilot3
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas       533 Nov 26 07:10 boinc_task_state.xml
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 07:18 init_data.xml
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas 933297450 Nov 26 07:22 HITS.47556149._001537.pool.root.1
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas      1076 Nov 26 07:23 memory_monitor_summary.json
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas   1516240 Nov 26 07:23 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas   3230627 Nov 26 07:23 log.47556149._001537.job.log.tgz.1
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas      8641 Nov 26 07:24 heartbeat.json
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas        95 Nov 26 07:24 pilot_heartbeat.json
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas      4825 Nov 26 07:24 pilotlog.txt
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 07:24 boinc_mmap_file
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas        29 Nov 26 07:24 wrapper_checkpoint.txt
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas  14474480 Nov 26 07:24 log.47556149._001537.job.log.1
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas       353 Nov 26 07:24 output.list
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas       620 Nov 26 07:24 runtime_log
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas  17725440 Nov 26 07:24 result.tar.gz
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas       671 Nov 26 07:24 SOLODm8lPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHZIKDme8An1m.diag
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas      9346 Nov 26 07:24 runtime_log.err
[2025-11-26 07:24:40] -rw-r--r--. 1 boincer umatlas     21353 Nov 26 07:24 stderr.txt
[2025-11-26 07:24:40] HITS file was successfully produced:
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas 933297450 Nov 26 07:22 shared/HITS.pool.root.1
[2025-11-26 07:24:40]  *** Contents of shared directory: ***
[2025-11-26 07:24:40] total 1331560
[2025-11-26 07:24:40] -rw-r--r--. 2 boincer umatlas 411872283 Nov 25 00:02 ATLAS.root_0
[2025-11-26 07:24:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:02 start_atlas.sh
[2025-11-26 07:24:40] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:02 input.tar.gz
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas 933297450 Nov 26 07:22 HITS.pool.root.1
[2025-11-26 07:24:40] -rw-------. 1 boincer umatlas  17725440 Nov 26 07:24 result.tar.gz
07:24:42 (2324883): run_atlas exited; CPU time 226323.993969
07:24:42 (2324883): called boinc_finish(0)

</stderr_txt>
]]>

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