Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:05 (2742706): wrapper (7.7.26015): starting
16:36:05 (2742706): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 16:36:05] Arguments: --nthreads 8
[2025-11-25 16:36:05] Threads: 8
[2025-11-25 16:36:05] Checking for CVMFS
[2025-11-25 16:36:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:36:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:36:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:36:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:36:05] 2.13.3.0 11416 29111 236692 153298 0 352 24445846 32935937 49540 16776704 0 244311995 99.621 236098213 37219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 16:36:05] CVMFS is ok
[2025-11-25 16:36:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:36:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:36:05] Further information can be found at the LHC@home message board.
[2025-11-25 16:36:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:36:05] Checking for apptainer binary...
[2025-11-25 16:36:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:36:05] Running /usr/bin/apptainer --version
[2025-11-25 16:36:05] apptainer version 1.4.4-1.el9
[2025-11-25 16:36:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:36:06] c7-2-16.aglt2.org
[2025-11-25 16:36:06] apptainer works
[2025-11-25 16:36:06] Set ATHENA_PROC_NUMBER=8
[2025-11-25 16:36:06] Set ATHENA_CORE_NUMBER=8
[2025-11-25 16:36:06] Starting ATLAS job with PandaID=6895384705
[2025-11-25 16:36:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:48:28 (2866880): wrapper (7.7.26015): starting
16:48:28 (2866880): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 16:48:28] Arguments: --nthreads 8
[2025-11-25 16:48:28] Threads: 8
[2025-11-25 16:48:28] This job has been restarted, cleaning up previous attempt
[2025-11-25 16:48:28] Checking for CVMFS
[2025-11-25 16:48:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:48:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:48:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:48:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:48:28] 2.13.3.0 11416 29123 228952 153298 0 358 24795284 32935937 43972 16776704 0 244558797 99.621 236247916 37218 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 16:48:28] CVMFS is ok
[2025-11-25 16:48:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:48:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:48:28] Further information can be found at the LHC@home message board.
[2025-11-25 16:48:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:48:28] Checking for apptainer binary...
[2025-11-25 16:48:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:48:28] Running /usr/bin/apptainer --version
[2025-11-25 16:48:28] apptainer version 1.4.4-1.el9
[2025-11-25 16:48:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:48:28] c7-2-16.aglt2.org
[2025-11-25 16:48:28] apptainer works
[2025-11-25 16:48:28] Set ATHENA_PROC_NUMBER=8
[2025-11-25 16:48:28] Set ATHENA_CORE_NUMBER=8
[2025-11-25 16:48:28] Starting ATLAS job with PandaID=6895384705
[2025-11-25 16:48:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:20:16 (2866880): BOINC client no longer exists - exiting
20:20:16 (2866880): timer handler: client dead, exiting
20:41:03 (630709): wrapper (7.7.26015): starting
20:41:03 (630709): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 20:41:03] Arguments: --nthreads 8
[2025-11-25 20:41:03] Threads: 8
[2025-11-25 20:41:03] This job has been restarted, cleaning up previous attempt
[2025-11-25 20:41:03] Checking for CVMFS
[2025-11-25 20:41:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:41:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:41:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:41:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:41:04] 2.13.3.0 11416 29356 250800 153304 0 627 23028734 32935936 43914 16776704 0 248413066 99.616 240693410 37073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:41:04] CVMFS is ok
[2025-11-25 20:41:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:41:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:41:04] Further information can be found at the LHC@home message board.
[2025-11-25 20:41:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:41:04] Checking for apptainer binary...
[2025-11-25 20:41:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:41:04] Running /usr/bin/apptainer --version
[2025-11-25 20:41:04] apptainer version 1.4.4-1.el9
[2025-11-25 20:41:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:41:04] c7-2-16.aglt2.org
[2025-11-25 20:41:04] apptainer works
[2025-11-25 20:41:04] Set ATHENA_PROC_NUMBER=8
[2025-11-25 20:41:04] Set ATHENA_CORE_NUMBER=8
[2025-11-25 20:41:04] Starting ATLAS job with PandaID=6895384705
[2025-11-25 20:41:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:53:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:53:37] 2025-11-26 17:53:00,064 | INFO     | time since job start (58276s) is within the limit (172800.0s)
[2025-11-26 12:53:37] 2025-11-26 17:53:00,787 | INFO     | monitor loop #3152: job 0:6895384705 is in state 'finished'
[2025-11-26 12:53:37] 2025-11-26 17:53:00,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,159 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:53:37] 2025-11-26 17:53:01,181 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3081.6643333333336
[2025-11-26 12:53:37] 2025-11-26 17:53:01,265 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895384705/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,266 | INFO     | extracted standard info from prmon json
[2025-11-26 12:53:37] 2025-11-26 17:53:01,266 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:53:37] 2025-11-26 17:53:01,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:53:37] 2025-11-26 17:53:01,351 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:53:37] 2025-11-26 17:53:01,372 | INFO     | sum of square deviations: 269226786489.45184
[2025-11-26 12:53:37] 2025-11-26 17:53:01,410 | INFO     | sum of deviations: 2279586063222.4844
[2025-11-26 12:53:37] 2025-11-26 17:53:01,411 | INFO     | mean x: 1764150455.414046
[2025-11-26 12:53:37] 2025-11-26 17:53:01,411 | INFO     | mean y: 2893454.993710692
[2025-11-26 12:53:37] 2025-11-26 17:53:01,411 | INFO     | intersect: -14934449311.03533
[2025-11-26 12:53:37] 2025-11-26 17:53:01,412 | INFO     | chi2: 7.911433286054127
[2025-11-26 12:53:37] 2025-11-26 17:53:01,413 | INFO     | sum of square deviations: 265016315608.5372
[2025-11-26 12:53:37] 2025-11-26 17:53:01,451 | INFO     | sum of deviations: 2551865348853.561
[2025-11-26 12:53:37] 2025-11-26 17:53:01,451 | INFO     | mean x: 1764150302.9241307
[2025-11-26 12:53:37] 2025-11-26 17:53:01,451 | INFO     | mean y: 2903312.8271865123
[2025-11-26 12:53:37] 2025-11-26 17:53:01,451 | INFO     | intersect: -16984254696.159105
[2025-11-26 12:53:37] 2025-11-26 17:53:01,452 | INFO     | chi2: 5.54767988743485
[2025-11-26 12:53:37] 2025-11-26 17:53:01,452 | INFO     | current chi2=5.54767988743485 (change=29.87768856985727 %)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,453 | INFO     | sum of square deviations: 260849812039.52444
[2025-11-26 12:53:37] 2025-11-26 17:53:01,491 | INFO     | sum of deviations: 2626623379999.577
[2025-11-26 12:53:37] 2025-11-26 17:53:01,491 | INFO     | mean x: 1764150150.431144
[2025-11-26 12:53:37] 2025-11-26 17:53:01,492 | INFO     | mean y: 2906040.5858050846
[2025-11-26 12:53:37] 2025-11-26 17:53:01,492 | INFO     | intersect: -17761178183.67309
[2025-11-26 12:53:37] 2025-11-26 17:53:01,492 | INFO     | chi2: 5.095380313325241
[2025-11-26 12:53:37] 2025-11-26 17:53:01,493 | INFO     | current chi2=5.095380313325241 (change=8.152950121257703 %)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,493 | INFO     | right removable region: 943
[2025-11-26 12:53:37] 2025-11-26 17:53:01,494 | INFO     | sum of square deviations: 265015201748.53745
[2025-11-26 12:53:37] 2025-11-26 17:53:01,527 | INFO     | sum of deviations: 1893085969790.502
[2025-11-26 12:53:37] 2025-11-26 17:53:01,532 | INFO     | mean x: 1764150607.9241307
[2025-11-26 12:53:37] 2025-11-26 17:53:01,532 | INFO     | mean y: 2907448.7291886196
[2025-11-26 12:53:37] 2025-11-26 17:53:01,532 | INFO     | intersect: -12598968754.687462
[2025-11-26 12:53:37] 2025-11-26 17:53:01,533 | INFO     | chi2: 3.7113809131553097
[2025-11-26 12:53:37] 2025-11-26 17:53:01,533 | INFO     | current chi2=3.7113809131553097 (change=53.08838766677659 %)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,534 | INFO     | sum of square deviations: 260847988325.3858
[2025-11-26 12:53:37] 2025-11-26 17:53:01,567 | INFO     | sum of deviations: 1743126576591.9436
[2025-11-26 12:53:37] 2025-11-26 17:53:01,567 | INFO     | mean x: 1764150760.4300847
[2025-11-26 12:53:37] 2025-11-26 17:53:01,567 | INFO     | mean y: 2912929.537076271
[2025-11-26 12:53:37] 2025-11-26 17:53:01,567 | INFO     | intersect: -11786091445.62641
[2025-11-26 12:53:37] 2025-11-26 17:53:01,572 | INFO     | chi2: 3.0781173162632967
[2025-11-26 12:53:37] 2025-11-26 17:53:01,573 | INFO     | current chi2=3.0781173162632967 (change=17.062748656365496 %)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,573 | INFO     | left removable region: 20
[2025-11-26 12:53:37] 2025-11-26 17:53:01,573 | INFO     | sum of square deviations: 243825194306.35587
[2025-11-26 12:53:37] 2025-11-26 17:53:01,605 | INFO     | sum of deviations: 1952328264858.6492
[2025-11-26 12:53:37] 2025-11-26 17:53:01,605 | INFO     | mean x: 1764150729.9371614
[2025-11-26 12:53:37] 2025-11-26 17:53:01,605 | INFO     | mean y: 2930708.476706392
[2025-11-26 12:53:37] 2025-11-26 17:53:01,606 | INFO     | intersect: -14122768415.13333
[2025-11-26 12:53:37] 2025-11-26 17:53:01,606 | INFO     | chi2: 0.13612817824735635
[2025-11-26 12:53:37] 2025-11-26 17:53:01,607 | INFO     | current memory leak: 8.01 B/s (using 923 data points, chi2=0.14)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | could have reported an average CPU frequency of 3187 MHz (35 samples)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | ..............................
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | . Timing measurements:
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | . get job = 0 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | . initial setup = 4 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | . payload setup = 22 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | . stage-in = 0 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,612 | INFO     | . payload execution = 58197 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,613 | INFO     | . stage-out = 4 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,613 | INFO     | . log creation = 1 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,613 | INFO     | ..............................
[2025-11-26 12:53:37] 2025-11-26 17:53:01,791 | INFO     | 
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | job summary report
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | --------------------------------------------------
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | PanDA job id: 6895384705
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | task id: 47556149
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | errors: (none)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | pilot state: finished 
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | transexitcode: 0
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | exeerrorcode: 0
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | exeerrordiag: 
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | exitcode: 0
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | exitmsg: OK
[2025-11-26 12:53:37] 2025-11-26 17:53:01,792 | INFO     | cpuconsumptiontime: 206473 s
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | nevents: 1000
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | neventsw: 0
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | pid: 660728
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | pgrp: 660728
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | corecount: 8
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | event service: False
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | sizes: {0: 2284315, 1: 2284315, 11: 2284343, 16: 2284633, 22: 2284661, 58223: 2336359, 58228: 2345353, 58229: 2345409, 58236: 2345655}
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | --------------------------------------------------
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | 
[2025-11-26 12:53:37] 2025-11-26 17:53:01,793 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 12:53:37] 2025-11-26 17:53:01,832 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | job 6895384705 has completed (purged errors)
[2025-11-26 12:53:37] 2025-11-26 17:53:01,834 | INFO     | overall cleanup function is called
[2025-11-26 12:53:37] 2025-11-26 17:53:02,852 | INFO     | --- collectZombieJob: --- 10, [660728]
[2025-11-26 12:53:37] 2025-11-26 17:53:02,852 | INFO     | zombie collector waiting for pid 660728
[2025-11-26 12:53:37] 2025-11-26 17:53:02,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:53:37] 2025-11-26 17:53:02,852 | INFO     | collected zombie processes
[2025-11-26 12:53:37] 2025-11-26 17:53:02,852 | INFO     | will attempt to kill all subprocesses of pid=660728
[2025-11-26 12:53:37] 2025-11-26 17:53:04,914 | INFO     | process IDs to be killed: [660728] (in reverse order)
[2025-11-26 12:53:37] 2025-11-26 17:53:05,153 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:53:37] 2025-11-26 17:53:05,153 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:53:37] 2025-11-26 17:53:05,385 | INFO     | did not find any defunct processes belonging to 660728
[2025-11-26 12:53:37] 2025-11-26 17:53:05,444 | INFO     | did not find any defunct processes belonging to 660728
[2025-11-26 12:53:37] 2025-11-26 17:53:05,447 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:53:37] 2025-11-26 17:53:05,449 | INFO     | ready for new job
[2025-11-26 12:53:37] 2025-11-26 17:53:05,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:53:37] 2025-11-26 17:53:05,462 | INFO     | ***************************************
[2025-11-26 12:53:37] 2025-11-26 17:53:05,489 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:53:37] 2025-11-26 17:53:05,489 | INFO     | ***************************************
[2025-11-26 12:53:37] 2025-11-26 17:53:05,489 | INFO     | 
[2025-11-26 12:53:37] 2025-11-26 17:53:05,521 | INFO     | architecture information:
[2025-11-26 12:53:37] 2025-11-26 17:53:05,536 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:53:37] 2025-11-26 17:53:05,590 | INFO     | cat /etc/os-release:
[2025-11-26 12:53:37] NAME="CentOS Linux"
[2025-11-26 12:53:37] VERSION="7 (Core)"
[2025-11-26 12:53:37] ID="centos"
[2025-11-26 12:53:37] ID_LIKE="rhel fedora"
[2025-11-26 12:53:37] VERSION_ID="7"
[2025-11-26 12:53:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:53:37] ANSI_COLOR="0;31"
[2025-11-26 12:53:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:53:37] HOME_URL="https://www.centos.org/"
[2025-11-26 12:53:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:53:37] 
[2025-11-26 12:53:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:53:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:53:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:53:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:53:37] 
[2025-11-26 12:53:37] 2025-11-26 17:53:05,591 | INFO     | ***************************************
[2025-11-26 12:53:37] 2025-11-26 17:53:06,094 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 12:53:37] 2025-11-26 17:53:06,160 | INFO     | sufficient remaining disk space (63714623488 B)
[2025-11-26 12:53:37] 2025-11-26 17:53:06,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:53:37] 2025-11-26 17:53:06,160 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:53:37] 2025-11-26 17:53:06,160 | INFO     | update_server=False
[2025-11-26 12:53:37] 2025-11-26 17:53:06,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:53:37] 2025-11-26 17:53:06,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:53:37] 2025-11-26 17:53:06,214 | INFO     | all data control threads have been joined
[2025-11-26 12:53:37] 2025-11-26 17:53:06,773 | INFO     | all payload control threads have been joined
[2025-11-26 12:53:37] 2025-11-26 17:53:06,789 | INFO     | all job control threads have been joined
[2025-11-26 12:53:37] 2025-11-26 17:53:06,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:53:37] 2025-11-26 17:53:06,828 | INFO     | aborting loop
[2025-11-26 12:53:37] 2025-11-26 17:53:06,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:53:37] 2025-11-26 17:53:07,166 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,220 | INFO     | [data] control thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,246 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:53:37] 2025-11-26 17:53:07,605 | INFO     | [job] validate thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,666 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,779 | INFO     | [payload] control thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,794 | INFO     | [job] control thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,834 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,839 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:07,868 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:08,165 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:08,248 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:08,399 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:08,550 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:09,457 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:10,203 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:53:37] 2025-11-26 17:53:27,806 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:53:37] 2025-11-26 17:53:28,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074359473984)>', '<ExcThread(monitor, started 140073504859904)>']
[2025-11-26 12:53:37] 2025-11-26 17:53:33,888 | INFO     | all workflow threads have been joined
[2025-11-26 12:53:37] 2025-11-26 17:53:33,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:53:37] 2025-11-26 17:53:33,892 | INFO     | traces error code: 0
[2025-11-26 12:53:37] 2025-11-26 17:53:33,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:53:37] 2025-11-26 17:53:36,685 | INFO     | PID=639458 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:53:37] 2025-11-26 17:53:36,686 | INFO     | .. there are 68 such processes running
[2025-11-26 12:53:37] 2025-11-26 17:53:36,688 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:53:37] 2025-11-26 17:53:36,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:53:37] 2025-11-26 17:53:36,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:53:37] 2025-11-26 17:53:36,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:53:37] 2025-11-26 17:53:36,689 | INFO     | [monitor] control thread has ended
[2025-11-26 12:53:37] 2025-11-26 17:53:37,031 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:53:37] 2025-11-26 17:53:37,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:53:37] 2025-11-26 17:53:37,039 [wrapper] pilotpid: 639458
[2025-11-26 12:53:37] 2025-11-26 17:53:37,042 [wrapper] Pilot exit status: 0
[2025-11-26 12:53:37] 2025-11-26 17:53:37,063 [wrapper] pandaids: 6895384705 6895384705 6895384705
[2025-11-26 12:53:37] 2025-11-26 17:53:37,213 [wrapper] cleanup supervisor_pilot 2392123 639459
[2025-11-26 12:53:37] 2025-11-26 17:53:37,215 [wrapper] Test setup, not cleaning
[2025-11-26 12:53:37] 2025-11-26 17:53:37,222 [wrapper] apfmon messages muted
[2025-11-26 12:53:37] 2025-11-26 17:53:37,225 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:53:37] 2025-11-26 17:53:37,229 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:53:37]  *** Error codes and diagnostics ***
[2025-11-26 12:53:37]     "exeErrorCode": 0,
[2025-11-26 12:53:37]     "exeErrorDiag": "",
[2025-11-26 12:53:37]     "pilotErrorCode": 0,
[2025-11-26 12:53:37]     "pilotErrorDiag": "",
[2025-11-26 12:53:37]  *** Listing of results directory ***
[2025-11-26 12:53:37] total 1733400
[2025-11-26 12:53:37] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-26 12:53:37] -rwx------. 1 boincer umatlas     36292 Nov 24 00:10 runpilot2-wrapper.sh
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:10 queuedata.json
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas       100 Nov 25 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:53:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 16:36 run_atlas
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas       105 Nov 25 16:36 job.xml
[2025-11-26 12:53:37] -rw-r--r--. 3 boincer umatlas 409855410 Nov 25 16:36 EVNT.47483658._001229.pool.root.1
[2025-11-26 12:53:37] -rw-r--r--. 3 boincer umatlas 409855410 Nov 25 16:36 ATLAS.root_0
[2025-11-26 12:53:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:36 start_atlas.sh
[2025-11-26 12:53:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 16:36 shared
[2025-11-26 12:53:37] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 16:36 input.tar.gz
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas         0 Nov 25 16:36 boinc_lockfile
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 20:41 pandaJob.out
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas        57 Nov 25 20:41 setup.sh.local
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas    991877 Nov 25 20:41 agis_schedconf.cvmfs.json
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas       533 Nov 26 12:43 boinc_task_state.xml
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 12:48 init_data.xml
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas 933328815 Nov 26 12:52 HITS.47556149._002159.pool.root.1
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas      1074 Nov 26 12:52 memory_monitor_summary.json
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas   1516240 Nov 26 12:52 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas   2081520 Nov 26 12:52 log.47556149._002159.job.log.tgz.1
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas      8639 Nov 26 12:53 heartbeat.json
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:53 boinc_mmap_file
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas        29 Nov 26 12:53 wrapper_checkpoint.txt
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas        97 Nov 26 12:53 pilot_heartbeat.json
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas       823 Nov 26 12:53 pilotlog.txt
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas   6935490 Nov 26 12:53 log.47556149._002159.job.log.1
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas       353 Nov 26 12:53 output.list
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:53 runtime_log
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas   9031680 Nov 26 12:53 result.tar.gz
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas       916 Nov 26 12:53 v1MLDmq1dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmISLKDmtXYEem.diag
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas      9423 Nov 26 12:53 runtime_log.err
[2025-11-26 12:53:37] -rw-r--r--. 1 boincer umatlas     25792 Nov 26 12:53 stderr.txt
[2025-11-26 12:53:37] HITS file was successfully produced:
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas 933328815 Nov 26 12:52 shared/HITS.pool.root.1
[2025-11-26 12:53:37]  *** Contents of shared directory: ***
[2025-11-26 12:53:37] total 1321132
[2025-11-26 12:53:37] -rw-r--r--. 3 boincer umatlas 409855410 Nov 25 16:36 ATLAS.root_0
[2025-11-26 12:53:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 16:36 start_atlas.sh
[2025-11-26 12:53:37] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 16:36 input.tar.gz
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas 933328815 Nov 26 12:52 HITS.pool.root.1
[2025-11-26 12:53:37] -rw-------. 1 boincer umatlas   9031680 Nov 26 12:53 result.tar.gz
12:53:39 (630709): run_atlas exited; CPU time 207593.644812
12:53:39 (630709): called boinc_finish(0)

</stderr_txt>
]]>

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