Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:02 (1613442): wrapper (7.7.26015): starting
00:10:02 (1613442): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:10:02] Arguments: --nthreads 8
[2025-11-25 00:10:02] Threads: 8
[2025-11-25 00:10:02] Checking for CVMFS
[2025-11-25 00:10:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:10:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:10:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:10:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:10:04] 2.13.2.0 11163 35426 273700 153271 3 49 36284890 40960001 11407 16776704 0 31441820 99.633 28062740 39771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:10:04] CVMFS is ok
[2025-11-25 00:10:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:10:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:10:04] Further information can be found at the LHC@home message board.
[2025-11-25 00:10:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:10:04] Checking for apptainer binary...
[2025-11-25 00:10:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:10:04] Running /usr/bin/apptainer --version
[2025-11-25 00:10:04] apptainer version 1.4.4-1.el9
[2025-11-25 00:10:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:10:05] c-210-35-1.aglt2.org
[2025-11-25 00:10:05] apptainer works
[2025-11-25 00:10:05] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:10:05] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:10:05] Starting ATLAS job with PandaID=6895385435
[2025-11-25 00:10:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:38:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:38:26] 2025-11-27 01:37:33,791 | INFO     | monitor loop #9260: job 0:6895385435 is in state 'finished'
[2025-11-26 20:38:26] 2025-11-27 01:37:33,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:38:26] 2025-11-27 01:37:34,634 | INFO     | time since job start (159991s) is within the limit (172800.0s)
[2025-11-26 20:38:26] 2025-11-27 01:37:36,296 | INFO     | monitor loop #9261: job 0:6895385435 is in state 'finished'
[2025-11-26 20:38:26] 2025-11-27 01:37:36,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:38:26] 2025-11-27 01:37:36,642 | INFO     | time since job start (159993s) is within the limit (172800.0s)
[2025-11-26 20:38:26] 2025-11-27 01:37:38,655 | INFO     | time since job start (159995s) is within the limit (172800.0s)
[2025-11-26 20:38:26] 2025-11-27 01:37:38,859 | INFO     | monitor loop #9262: job 0:6895385435 is in state 'finished'
[2025-11-26 20:38:26] 2025-11-27 01:37:38,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:38:26] 2025-11-27 01:37:40,663 | INFO     | time since job start (159997s) is within the limit (172800.0s)
[2025-11-26 20:38:26] 2025-11-27 01:37:41,365 | INFO     | monitor loop #9263: job 0:6895385435 is in state 'finished'
[2025-11-26 20:38:26] 2025-11-27 01:37:41,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:38:26] 2025-11-27 01:37:42,209 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 20:38:26] 2025-11-27 01:37:42,249 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2691.441642857143
[2025-11-26 20:38:26] 2025-11-27 01:37:42,352 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895385435/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:38:26] 2025-11-27 01:37:42,353 | INFO     | extracted standard info from prmon json
[2025-11-26 20:38:26] 2025-11-27 01:37:42,353 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:38:26] 2025-11-27 01:37:42,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:38:26] 2025-11-27 01:37:42,567 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:38:26] 2025-11-27 01:37:42,699 | INFO     | sum of square deviations: 5583165487640.838
[2025-11-26 20:38:26] 2025-11-27 01:37:43,294 | INFO     | sum of deviations: 12693083772177.92
[2025-11-26 20:38:26] 2025-11-27 01:37:43,294 | INFO     | mean x: 1764127465.5566578
[2025-11-26 20:38:26] 2025-11-27 01:37:43,295 | INFO     | mean y: 2873521.893170546
[2025-11-26 20:38:26] 2025-11-27 01:37:43,295 | INFO     | intersect: -4007793501.084934
[2025-11-26 20:38:26] 2025-11-27 01:37:43,302 | INFO     | chi2: 17.575210207794036
[2025-11-26 20:38:26] 2025-11-27 01:37:43,379 | INFO     | sum of square deviations: 5551278429226.16
[2025-11-26 20:38:26] 2025-11-27 01:37:43,994 | INFO     | monitor loop #9264: job 0:6895385435 is in state 'finished'
[2025-11-26 20:38:26] 2025-11-27 01:37:43,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:38:26] 2025-11-27 01:37:44,326 | INFO     | sum of deviations: 13637777868154.496
[2025-11-26 20:38:26] 2025-11-27 01:37:44,327 | INFO     | mean x: 1764127313.0672784
[2025-11-26 20:38:26] 2025-11-27 01:37:44,327 | INFO     | mean y: 2878039.008792049
[2025-11-26 20:38:26] 2025-11-27 01:37:44,327 | INFO     | intersect: -4331038325.209593
[2025-11-26 20:38:26] 2025-11-27 01:37:44,381 | INFO     | chi2: 13.872666206942895
[2025-11-26 20:38:26] 2025-11-27 01:37:44,381 | INFO     | current chi2=13.872666206942895 (change=21.066854717954854 %)
[2025-11-26 20:38:26] 2025-11-27 01:37:44,381 | INFO     | right removable region: 2615
[2025-11-26 20:38:26] 2025-11-27 01:37:44,384 | INFO     | sum of square deviations: 5551269545186.157
[2025-11-26 20:38:26] 2025-11-27 01:37:44,936 | INFO     | PID=1621612 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:38:26] 2025-11-27 01:37:44,937 | INFO     | .. there are 10 such processes running
[2025-11-26 20:38:26] 2025-11-27 01:37:44,960 | INFO     | sum of deviations: 11995616595503.484
[2025-11-26 20:38:26] 2025-11-27 01:37:44,960 | INFO     | mean x: 1764127618.0672784
[2025-11-26 20:38:26] 2025-11-27 01:37:44,960 | INFO     | mean y: 2876855.258792049
[2025-11-26 20:38:26] 2025-11-27 01:37:44,961 | INFO     | intersect: -3809187819.2487817
[2025-11-26 20:38:26] 2025-11-27 01:37:44,967 | INFO     | chi2: 15.51335937337785
[2025-11-26 20:38:26] 2025-11-27 01:37:44,968 | INFO     | current chi2=15.51335937337785 (change=11.73158562565483 %)
[2025-11-26 20:38:26] 2025-11-27 01:37:44,968 | INFO     | left removable region: 10
[2025-11-26 20:38:26] 2025-11-27 01:37:44,975 | INFO     | sum of square deviations: 5481538062983.204
[2025-11-26 20:38:26] 2025-11-27 01:37:45,571 | INFO     | sum of deviations: 12893112439815.951
[2025-11-26 20:38:26] 2025-11-27 01:37:45,571 | INFO     | mean x: 1764127587.5877159
[2025-11-26 20:38:26] 2025-11-27 01:37:45,571 | INFO     | mean y: 2883127.5362763917
[2025-11-26 20:38:26] 2025-11-27 01:37:45,571 | INFO     | intersect: -4146517110.7923026
[2025-11-26 20:38:26] 2025-11-27 01:37:45,578 | INFO     | chi2: 11.215028980023298
[2025-11-26 20:38:26] 2025-11-27 01:37:45,579 | INFO     | current memory leak: 2.35 B/s (using 2605 data points, chi2=11.22)
[2025-11-26 20:38:26] 2025-11-27 01:37:45,586 | INFO     | could have reported an average CPU frequency of 2797 MHz (90 samples)
[2025-11-26 20:38:26] 2025-11-27 01:37:45,586 | INFO     | ..............................
[2025-11-26 20:38:26] 2025-11-27 01:37:45,586 | INFO     | . Timing measurements:
[2025-11-26 20:38:26] 2025-11-27 01:37:45,586 | INFO     | . get job = 0 s
[2025-11-26 20:38:26] 2025-11-27 01:37:45,587 | INFO     | . initial setup = 5 s
[2025-11-26 20:38:26] 2025-11-27 01:37:45,591 | INFO     | . payload setup = 23 s
[2025-11-26 20:38:26] 2025-11-27 01:37:45,591 | INFO     | . stage-in = 0 s
[2025-11-26 20:38:26] 2025-11-27 01:37:45,591 | INFO     | . payload execution = 159861 s
[2025-11-26 20:38:26] 2025-11-27 01:37:45,591 | INFO     | . stage-out = 13 s
[2025-11-26 20:38:26] 2025-11-27 01:37:45,591 | INFO     | . log creation = 4 s
[2025-11-26 20:38:26] 2025-11-27 01:37:45,591 | INFO     | ..............................
[2025-11-26 20:38:26] 2025-11-27 01:37:45,941 | INFO     | time since job start (160002s) is within the limit (172800.0s)
[2025-11-26 20:38:26] 2025-11-27 01:37:46,021 | INFO     | 
[2025-11-26 20:38:26] 2025-11-27 01:37:46,021 | INFO     | job summary report
[2025-11-26 20:38:26] 2025-11-27 01:37:46,021 | INFO     | --------------------------------------------------
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | PanDA job id: 6895385435
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | task id: 47556149
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | errors: (none)
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | pilot state: finished 
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | transexitcode: 0
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | exeerrorcode: 0
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | exeerrordiag: 
[2025-11-26 20:38:26] 2025-11-27 01:37:46,022 | INFO     | exitcode: 0
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | exitmsg: OK
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | cpuconsumptiontime: 241924 s
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | nevents: 1000
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | neventsw: 0
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | pid: 1631789
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | pgrp: 1631789
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | corecount: 8
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | event service: False
[2025-11-26 20:38:26] 2025-11-27 01:37:46,023 | INFO     | sizes: {0: 2284138, 1: 2284337, 12: 2284337, 21: 2284627, 23: 2284655, 159888: 2382659, 159890: 2382786, 159904: 2391841, 159905: 2391897, 159959: 2392143}
[2025-11-26 20:38:26] 2025-11-27 01:37:46,024 | INFO     | --------------------------------------------------
[2025-11-26 20:38:26] 2025-11-27 01:37:46,024 | INFO     | 
[2025-11-26 20:38:26] 2025-11-27 01:37:46,024 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 20:38:26] 2025-11-27 01:37:46,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,143 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:38:26] 2025-11-27 01:37:46,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,143 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:38:26] 2025-11-27 01:37:46,143 | INFO     | job 6895385435 has completed (purged errors)
[2025-11-26 20:38:26] 2025-11-27 01:37:46,143 | INFO     | overall cleanup function is called
[2025-11-26 20:38:26] 2025-11-27 01:37:47,272 | INFO     | --- collectZombieJob: --- 10, [1631789]
[2025-11-26 20:38:26] 2025-11-27 01:37:47,272 | INFO     | zombie collector waiting for pid 1631789
[2025-11-26 20:38:26] 2025-11-27 01:37:47,272 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:38:26] 2025-11-27 01:37:47,272 | INFO     | collected zombie processes
[2025-11-26 20:38:26] 2025-11-27 01:37:47,272 | INFO     | will attempt to kill all subprocesses of pid=1631789
[2025-11-26 20:38:26] 2025-11-27 01:37:48,159 | INFO     | process IDs to be killed: [1631789] (in reverse order)
[2025-11-26 20:38:26] 2025-11-27 01:37:48,266 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:38:26] 2025-11-27 01:37:48,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:38:26] 2025-11-27 01:37:48,315 | INFO     | did not find any defunct processes belonging to 1631789
[2025-11-26 20:38:26] 2025-11-27 01:37:48,342 | INFO     | did not find any defunct processes belonging to 1631789
[2025-11-26 20:38:26] 2025-11-27 01:37:48,344 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:38:26] 2025-11-27 01:37:48,344 | INFO     | ready for new job
[2025-11-26 20:38:26] 2025-11-27 01:37:48,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:38:26] 2025-11-27 01:37:48,363 | INFO     | ***************************************
[2025-11-26 20:38:26] 2025-11-27 01:37:48,363 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:38:26] 2025-11-27 01:37:48,363 | INFO     | ***************************************
[2025-11-26 20:38:26] 2025-11-27 01:37:48,363 | INFO     | 
[2025-11-26 20:38:26] 2025-11-27 01:37:48,370 | INFO     | architecture information:
[2025-11-26 20:38:26] 2025-11-27 01:37:48,375 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:38:26] 2025-11-27 01:37:48,498 | INFO     | cat /etc/os-release:
[2025-11-26 20:38:26] NAME="CentOS Linux"
[2025-11-26 20:38:26] VERSION="7 (Core)"
[2025-11-26 20:38:26] ID="centos"
[2025-11-26 20:38:26] ID_LIKE="rhel fedora"
[2025-11-26 20:38:26] VERSION_ID="7"
[2025-11-26 20:38:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:38:26] ANSI_COLOR="0;31"
[2025-11-26 20:38:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:38:26] HOME_URL="https://www.centos.org/"
[2025-11-26 20:38:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:38:26] 
[2025-11-26 20:38:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:38:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:38:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:38:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:38:26] 
[2025-11-26 20:38:26] 2025-11-27 01:37:48,498 | INFO     | ***************************************
[2025-11-26 20:38:26] 2025-11-27 01:37:49,034 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 20:38:26] 2025-11-27 01:37:49,146 | INFO     | sufficient remaining disk space (70385664000 B)
[2025-11-26 20:38:26] 2025-11-27 01:37:49,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:38:26] 2025-11-27 01:37:49,147 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:38:26] 2025-11-27 01:37:49,147 | INFO     | update_server=False
[2025-11-26 20:38:26] 2025-11-27 01:37:49,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:38:26] 2025-11-27 01:37:49,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:38:26] 2025-11-27 01:37:50,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:38:26] 2025-11-27 01:37:50,029 | INFO     | aborting loop
[2025-11-26 20:38:26] 2025-11-27 01:37:50,124 | INFO     | all data control threads have been joined
[2025-11-26 20:38:26] 2025-11-27 01:37:50,153 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:50,258 | INFO     | all job control threads have been joined
[2025-11-26 20:38:26] 2025-11-27 01:37:50,298 | INFO     | all payload control threads have been joined
[2025-11-26 20:38:26] 2025-11-27 01:37:50,426 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:50,581 | INFO     | [job] validate thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:50,811 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:50,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:38:26] 2025-11-27 01:37:51,019 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,035 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,127 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,129 | INFO     | [data] control thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,151 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,177 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,263 | INFO     | [job] control thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,309 | INFO     | [payload] control thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,381 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,750 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:51,851 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:37:52,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:38:26] 2025-11-27 01:37:56,543 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:38:26] 2025-11-27 01:38:01,706 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:38:26] 2025-11-27 01:38:02,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139780862912320)>', '<ExcThread(monitor, started 139780364949248)>']
[2025-11-26 20:38:26] 2025-11-27 01:38:07,327 | INFO     | all workflow threads have been joined
[2025-11-26 20:38:26] 2025-11-27 01:38:07,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:38:26] 2025-11-27 01:38:07,327 | INFO     | traces error code: 0
[2025-11-26 20:38:26] 2025-11-27 01:38:07,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:38:26] 2025-11-27 01:38:22,619 | INFO     | PID=1621612 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:38:26] 2025-11-27 01:38:22,619 | INFO     | .. there are 10 such processes running
[2025-11-26 20:38:26] 2025-11-27 01:38:22,619 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:38:26] 2025-11-27 01:38:22,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:38:26] 2025-11-27 01:38:22,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:38:26] 2025-11-27 01:38:22,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:38:26] 2025-11-27 01:38:22,656 | INFO     | [monitor] control thread has ended
[2025-11-26 20:38:26] 2025-11-27 01:38:24,606 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:38:26] 2025-11-27 01:38:24,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:38:26] 2025-11-27 01:38:24,672 [wrapper] pilotpid: 1621612
[2025-11-26 20:38:26] 2025-11-27 01:38:24,689 [wrapper] Pilot exit status: 0
[2025-11-26 20:38:26] 2025-11-27 01:38:24,849 [wrapper] pandaids: 6895385435
[2025-11-26 20:38:26] 2025-11-27 01:38:25,194 [wrapper] cleanup supervisor_pilot 1595878 1621613
[2025-11-26 20:38:26] 2025-11-27 01:38:25,209 [wrapper] Test setup, not cleaning
[2025-11-26 20:38:26] 2025-11-27 01:38:25,270 [wrapper] apfmon messages muted
[2025-11-26 20:38:26] 2025-11-27 01:38:25,302 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:38:26] 2025-11-27 01:38:25,327 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:38:26]  *** Error codes and diagnostics ***
[2025-11-26 20:38:26]     "exeErrorCode": 0,
[2025-11-26 20:38:26]     "exeErrorDiag": "",
[2025-11-26 20:38:26]     "pilotErrorCode": 0,
[2025-11-26 20:38:26]     "pilotErrorDiag": "",
[2025-11-26 20:38:26]  *** Listing of results directory ***
[2025-11-26 20:38:26] total 1334156
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:10 queuedata.json
[2025-11-26 20:38:26] -rwx------. 1 boincer umatlas     36292 Nov 24 00:11 runpilot2-wrapper.sh
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:38:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:10 run_atlas
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:10 job.xml
[2025-11-26 20:38:26] -rw-r--r--. 2 boincer umatlas 407272048 Nov 25 00:10 EVNT.47483658._001236.pool.root.1
[2025-11-26 20:38:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 20:38:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:10 shared
[2025-11-26 20:38:26] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:10 input.tar.gz
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:10 boinc_lockfile
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:10 pandaJob.out
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas        57 Nov 25 00:10 setup.sh.local
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas    991801 Nov 25 00:10 agis_schedconf.cvmfs.json
[2025-11-26 20:38:26] drwx------. 5 boincer umatlas      4096 Nov 25 00:11 pilot3
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas       533 Nov 26 19:57 boinc_task_state.xml
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas 909089056 Nov 26 20:33 HITS.47556149._002228.pool.root.1
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas      1060 Nov 26 20:36 memory_monitor_summary.json
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas   3262282 Nov 26 20:36 log.47556149._002228.job.log.tgz.1
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas        95 Nov 26 20:37 pilot_heartbeat.json
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 20:37 init_data.xml
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas      8617 Nov 26 20:37 heartbeat.json
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:38 wrapper_checkpoint.txt
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas       823 Nov 26 20:38 pilotlog.txt
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas  19686727 Nov 26 20:38 log.47556149._002228.job.log.1
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:38 boinc_mmap_file
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas       353 Nov 26 20:38 output.list
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:38 runtime_log
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas  22968320 Nov 26 20:38 result.tar.gz
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas      9354 Nov 26 20:38 runtime_log.err
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas       666 Nov 26 20:38 BDbLDmp2dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjSLKDmogmRIm.diag
[2025-11-26 20:38:26] -rw-r--r--. 1 boincer umatlas     21896 Nov 26 20:38 stderr.txt
[2025-11-26 20:38:26] HITS file was successfully produced:
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas 909089056 Nov 26 20:33 shared/HITS.pool.root.1
[2025-11-26 20:38:26]  *** Contents of shared directory: ***
[2025-11-26 20:38:26] total 1308544
[2025-11-26 20:38:26] -rw-r--r--. 2 boincer umatlas 407272048 Nov 25 00:10 ATLAS.root_0
[2025-11-26 20:38:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 20:38:26] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:10 input.tar.gz
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas 909089056 Nov 26 20:33 HITS.pool.root.1
[2025-11-26 20:38:26] -rw-------. 1 boincer umatlas  22968320 Nov 26 20:38 result.tar.gz
20:38:27 (1613442): run_atlas exited; CPU time 244469.649004
20:38:27 (1613442): called boinc_finish(0)

</stderr_txt>
]]>

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