Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:48:41 (31258): wrapper (7.7.26015): starting
23:48:41 (31258): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 23:48:41] Arguments: --nthreads 12
[2025-11-24 23:48:41] Threads: 12
[2025-11-24 23:48:41] Checking for CVMFS
[2025-11-24 23:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:48:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:48:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:48:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:48:41] 2.11.2.0 3009 71049 93316 153270 1 81 14740862 20275201 1 130560 0 29164374 99.912 3738578 34523 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 23:48:41] CVMFS is ok
[2025-11-24 23:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:48:41] Further information can be found at the LHC@home message board.
[2025-11-24 23:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:48:41] Checking for apptainer binary...
[2025-11-24 23:48:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:48:41] Running /usr/bin/apptainer --version
[2025-11-24 23:48:41] apptainer version 1.3.2-1.el7
[2025-11-24 23:48:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:48:42] c-115-42.aglt2.org
[2025-11-24 23:48:42] apptainer works
[2025-11-24 23:48:42] Set ATHENA_PROC_NUMBER=12
[2025-11-24 23:48:42] Set ATHENA_CORE_NUMBER=12
[2025-11-24 23:48:42] Starting ATLAS job with PandaID=6895383643
[2025-11-24 23:48:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:14:55]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:14:55] 2025-11-25 11:14:20,116 | INFO     | time since job start (23123s) is within the limit (172800.0s)
[2025-11-25 06:14:55] 2025-11-25 11:14:21,820 | INFO     | monitor loop #1728: job 0:6895383643 is in state 'finished'
[2025-11-25 06:14:55] 2025-11-25 11:14:21,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 06:14:55] 2025-11-25 11:14:22,118 | INFO     | time since job start (23125s) is within the limit (172800.0s)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,458 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 06:14:55] 2025-11-25 11:14:23,461 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-25 06:14:55] 2025-11-25 11:14:23,464 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895383643/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,468 | INFO     | extracted standard info from prmon json
[2025-11-25 06:14:55] 2025-11-25 11:14:23,469 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:14:55] 2025-11-25 11:14:23,469 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:14:55] 2025-11-25 11:14:23,477 | INFO     | fitting pss+swap vs Time
[2025-11-25 06:14:55] 2025-11-25 11:14:23,477 | INFO     | sum of square deviations: 16880742338.321947
[2025-11-25 06:14:55] 2025-11-25 11:14:23,480 | INFO     | sum of deviations: 282148122743.0771
[2025-11-25 06:14:55] 2025-11-25 11:14:23,480 | INFO     | mean x: 1764057694.1899736
[2025-11-25 06:14:55] 2025-11-25 11:14:23,480 | INFO     | mean y: 4017933.6517150397
[2025-11-25 06:14:55] 2025-11-25 11:14:23,480 | INFO     | intersect: -29480797179.974342
[2025-11-25 06:14:55] 2025-11-25 11:14:23,481 | INFO     | chi2: 5.988379807671889
[2025-11-25 06:14:55] 2025-11-25 11:14:23,481 | INFO     | sum of square deviations: 16221431005.63901
[2025-11-25 06:14:55] 2025-11-25 11:14:23,484 | INFO     | sum of deviations: 448550500980.62616
[2025-11-25 06:14:55] 2025-11-25 11:14:23,484 | INFO     | mean x: 1764057541.6925135
[2025-11-25 06:14:55] 2025-11-25 11:14:23,484 | INFO     | mean y: 4056384.8663101606
[2025-11-25 06:14:55] 2025-11-25 11:14:23,485 | INFO     | intersect: -48775172390.311554
[2025-11-25 06:14:55] 2025-11-25 11:14:23,485 | INFO     | chi2: 3.111297597831112
[2025-11-25 06:14:55] 2025-11-25 11:14:23,485 | INFO     | current chi2=3.111297597831112 (change=48.04441772639174 %)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,486 | INFO     | sum of square deviations: 15579515347.951294
[2025-11-25 06:14:55] 2025-11-25 11:14:23,488 | INFO     | sum of deviations: 502596187711.8781
[2025-11-25 06:14:55] 2025-11-25 11:14:23,488 | INFO     | mean x: 1764057389.195122
[2025-11-25 06:14:55] 2025-11-25 11:14:23,489 | INFO     | mean y: 4069126.7100271
[2025-11-25 06:14:55] 2025-11-25 11:14:23,489 | INFO     | intersect: -56904538035.51638
[2025-11-25 06:14:55] 2025-11-25 11:14:23,489 | INFO     | chi2: 2.4558275768303677
[2025-11-25 06:14:55] 2025-11-25 11:14:23,489 | INFO     | current chi2=2.4558275768303677 (change=21.06741642000666 %)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,490 | INFO     | right removable region: 368
[2025-11-25 06:14:55] 2025-11-25 11:14:23,490 | INFO     | sum of square deviations: 16221387085.63901
[2025-11-25 06:14:55] 2025-11-25 11:14:23,493 | INFO     | sum of deviations: 141544569641.0804
[2025-11-25 06:14:55] 2025-11-25 11:14:23,493 | INFO     | mean x: 1764057846.6925135
[2025-11-25 06:14:55] 2025-11-25 11:14:23,493 | INFO     | mean y: 4050324.9572192514
[2025-11-25 06:14:55] 2025-11-25 11:14:23,494 | INFO     | intersect: -15388764568.974934
[2025-11-25 06:14:55] 2025-11-25 11:14:23,494 | INFO     | chi2: 3.6743379160505247
[2025-11-25 06:14:55] 2025-11-25 11:14:23,494 | INFO     | current chi2=3.6743379160505247 (change=38.64220316581752 %)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,495 | INFO     | sum of square deviations: 15579427507.951296
[2025-11-25 06:14:55] 2025-11-25 11:14:23,497 | INFO     | sum of deviations: 112407246400.02457
[2025-11-25 06:14:55] 2025-11-25 11:14:23,497 | INFO     | mean x: 1764057999.195122
[2025-11-25 06:14:55] 2025-11-25 11:14:23,498 | INFO     | mean y: 4057234.6802168023
[2025-11-25 06:14:55] 2025-11-25 11:14:23,498 | INFO     | intersect: -12723811108.251984
[2025-11-25 06:14:55] 2025-11-25 11:14:23,498 | INFO     | chi2: 3.6309484887329386
[2025-11-25 06:14:55] 2025-11-25 11:14:23,498 | INFO     | current chi2=3.6309484887329386 (change=1.1808774344909618 %)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,498 | INFO     | left removable region: 20
[2025-11-25 06:14:55] 2025-11-25 11:14:23,499 | INFO     | sum of square deviations: 13068028348.514393
[2025-11-25 06:14:55] 2025-11-25 11:14:23,501 | INFO     | sum of deviations: 294983484413.72107
[2025-11-25 06:14:55] 2025-11-25 11:14:23,501 | INFO     | mean x: 1764057968.704023
[2025-11-25 06:14:55] 2025-11-25 11:14:23,501 | INFO     | mean y: 4119558.841954023
[2025-11-25 06:14:55] 2025-11-25 11:14:23,501 | INFO     | intersect: -39815809847.361115
[2025-11-25 06:14:55] 2025-11-25 11:14:23,502 | INFO     | chi2: 0.04184783757307903
[2025-11-25 06:14:55] 2025-11-25 11:14:23,502 | INFO     | current memory leak: 22.57 B/s (using 348 data points, chi2=0.04)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,502 | INFO     | could have reported an average CPU frequency of 2609 MHz (16 samples)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | ..............................
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | . Timing measurements:
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | . get job = 0 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | . initial setup = 2 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | . payload setup = 7 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | . stage-in = 0 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | . payload execution = 23091 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,503 | INFO     | . stage-out = 3 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,504 | INFO     | . log creation = 0 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,504 | INFO     | ..............................
[2025-11-25 06:14:55] 2025-11-25 11:14:23,582 | INFO     | 
[2025-11-25 06:14:55] 2025-11-25 11:14:23,582 | INFO     | job summary report
[2025-11-25 06:14:55] 2025-11-25 11:14:23,582 | INFO     | --------------------------------------------------
[2025-11-25 06:14:55] 2025-11-25 11:14:23,583 | INFO     | PanDA job id: 6895383643
[2025-11-25 06:14:55] 2025-11-25 11:14:23,583 | INFO     | task id: 47556149
[2025-11-25 06:14:55] 2025-11-25 11:14:23,583 | INFO     | errors: (none)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 06:14:55] 2025-11-25 11:14:23,583 | INFO     | pilot state: finished 
[2025-11-25 06:14:55] 2025-11-25 11:14:23,583 | INFO     | transexitcode: 0
[2025-11-25 06:14:55] 2025-11-25 11:14:23,584 | INFO     | exeerrorcode: 0
[2025-11-25 06:14:55] 2025-11-25 11:14:23,584 | INFO     | exeerrordiag: 
[2025-11-25 06:14:55] 2025-11-25 11:14:23,584 | INFO     | exitcode: 0
[2025-11-25 06:14:55] 2025-11-25 11:14:23,584 | INFO     | exitmsg: OK
[2025-11-25 06:14:55] 2025-11-25 11:14:23,584 | INFO     | cpuconsumptiontime: 266306 s
[2025-11-25 06:14:55] 2025-11-25 11:14:23,584 | INFO     | nevents: 1000
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | neventsw: 0
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | pid: 9141
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | pgrp: 9141
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | corecount: 12
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | event service: False
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | sizes: {0: 2284310, 5: 2284572, 11: 2284628, 23102: 2320476, 23105: 2329531, 23111: 2329721}
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | --------------------------------------------------
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | 
[2025-11-25 06:14:55] 2025-11-25 11:14:23,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 06:14:55] 2025-11-25 11:14:23,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 06:14:55] 2025-11-25 11:14:23,614 | INFO     | job 6895383643 has completed (purged errors)
[2025-11-25 06:14:55] 2025-11-25 11:14:23,614 | INFO     | overall cleanup function is called
[2025-11-25 06:14:55] 2025-11-25 11:14:24,626 | INFO     | --- collectZombieJob: --- 10, [9141]
[2025-11-25 06:14:55] 2025-11-25 11:14:24,627 | INFO     | zombie collector waiting for pid 9141
[2025-11-25 06:14:55] 2025-11-25 11:14:24,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 06:14:55] 2025-11-25 11:14:24,627 | INFO     | collected zombie processes
[2025-11-25 06:14:55] 2025-11-25 11:14:24,627 | INFO     | will attempt to kill all subprocesses of pid=9141
[2025-11-25 06:14:55] 2025-11-25 11:14:24,718 | INFO     | process IDs to be killed: [9141] (in reverse order)
[2025-11-25 06:14:55] 2025-11-25 11:14:24,871 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 06:14:55] 2025-11-25 11:14:24,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 06:14:55] 2025-11-25 11:14:24,875 | INFO     | did not find any defunct processes belonging to 9141
[2025-11-25 06:14:55] 2025-11-25 11:14:24,878 | INFO     | did not find any defunct processes belonging to 9141
[2025-11-25 06:14:55] 2025-11-25 11:14:24,880 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 06:14:55] 2025-11-25 11:14:24,880 | INFO     | ready for new job
[2025-11-25 06:14:55] 2025-11-25 11:14:24,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 06:14:55] 2025-11-25 11:14:24,882 | INFO     | ***************************************
[2025-11-25 06:14:55] 2025-11-25 11:14:24,882 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 06:14:55] 2025-11-25 11:14:24,883 | INFO     | ***************************************
[2025-11-25 06:14:55] 2025-11-25 11:14:24,883 | INFO     | 
[2025-11-25 06:14:55] 2025-11-25 11:14:24,883 | INFO     | architecture information:
[2025-11-25 06:14:55] 2025-11-25 11:14:24,884 | INFO     | executing command: cat /etc/os-release
[2025-11-25 06:14:55] 2025-11-25 11:14:24,899 | INFO     | cat /etc/os-release:
[2025-11-25 06:14:55] NAME="CentOS Linux"
[2025-11-25 06:14:55] VERSION="7 (Core)"
[2025-11-25 06:14:55] ID="centos"
[2025-11-25 06:14:55] ID_LIKE="rhel fedora"
[2025-11-25 06:14:55] VERSION_ID="7"
[2025-11-25 06:14:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 06:14:55] ANSI_COLOR="0;31"
[2025-11-25 06:14:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 06:14:55] HOME_URL="https://www.centos.org/"
[2025-11-25 06:14:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 06:14:55] 
[2025-11-25 06:14:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 06:14:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 06:14:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 06:14:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 06:14:55] 
[2025-11-25 06:14:55] 2025-11-25 11:14:24,899 | INFO     | ***************************************
[2025-11-25 06:14:55] 2025-11-25 11:14:25,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 06:14:55] 2025-11-25 11:14:25,420 | INFO     | sufficient remaining disk space (17478713344 B)
[2025-11-25 06:14:55] 2025-11-25 11:14:25,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 06:14:55] 2025-11-25 11:14:25,420 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 06:14:55] 2025-11-25 11:14:25,420 | INFO     | update_server=False
[2025-11-25 06:14:55] 2025-11-25 11:14:25,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:14:55] 2025-11-25 11:14:25,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:14:55] 2025-11-25 11:14:25,421 | INFO     | aborting loop
[2025-11-25 06:14:55] 2025-11-25 11:14:25,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:14:55] 2025-11-25 11:14:25,863 | INFO     | all payload control threads have been joined
[2025-11-25 06:14:55] 2025-11-25 11:14:25,993 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:14:55] 2025-11-25 11:14:26,426 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:26,427 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:26,428 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:26,462 | INFO     | all data control threads have been joined
[2025-11-25 06:14:55] 2025-11-25 11:14:26,755 | INFO     | all job control threads have been joined
[2025-11-25 06:14:55] 2025-11-25 11:14:26,869 | INFO     | [payload] control thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:26,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,066 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,141 | INFO     | [job] validate thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,141 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,467 | INFO     | [data] control thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,499 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,500 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,562 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,760 | INFO     | [job] control thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,792 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:27,999 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:28,599 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:14:55] 2025-11-25 11:14:32,603 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:14:55] 2025-11-25 11:14:34,315 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:14:55] 2025-11-25 11:14:34,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010234373952)>', '<ExcThread(monitor, started 140009776584448)>']
[2025-11-25 06:14:55] 2025-11-25 11:14:39,813 | INFO     | all workflow threads have been joined
[2025-11-25 06:14:55] 2025-11-25 11:14:39,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:14:55] 2025-11-25 11:14:39,814 | INFO     | traces error code: 0
[2025-11-25 06:14:55] 2025-11-25 11:14:39,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:14:55] 2025-11-25 11:14:55,381 | INFO     | PID=2634 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 06:14:55] 2025-11-25 11:14:55,382 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:14:55] 2025-11-25 11:14:55,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:14:55] 2025-11-25 11:14:55,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:14:55] 2025-11-25 11:14:55,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:14:55] 2025-11-25 11:14:55,383 | INFO     | [monitor] control thread has ended
[2025-11-25 06:14:55] 2025-11-25 11:14:55,490 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:14:55] 2025-11-25 11:14:55,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:14:55] 2025-11-25 11:14:55,498 [wrapper] pilotpid: 2634
[2025-11-25 06:14:55] 2025-11-25 11:14:55,502 [wrapper] Pilot exit status: 0
[2025-11-25 06:14:55] 2025-11-25 11:14:55,516 [wrapper] pandaids: 6895383643
[2025-11-25 06:14:55] 2025-11-25 11:14:55,564 [wrapper] cleanup supervisor_pilot 10645 2635
[2025-11-25 06:14:55] 2025-11-25 11:14:55,568 [wrapper] Test setup, not cleaning
[2025-11-25 06:14:55] 2025-11-25 11:14:55,573 [wrapper] apfmon messages muted
[2025-11-25 06:14:55] 2025-11-25 11:14:55,576 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:14:55] 2025-11-25 11:14:55,580 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:14:55]  *** Error codes and diagnostics ***
[2025-11-25 06:14:55]     "exeErrorCode": 0,
[2025-11-25 06:14:55]     "exeErrorDiag": "",
[2025-11-25 06:14:55]     "pilotErrorCode": 0,
[2025-11-25 06:14:55]     "pilotErrorDiag": "",
[2025-11-25 06:14:55]  *** Listing of results directory ***
[2025-11-25 06:14:55] total 1306240
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 23:09 pilot3.tar.gz
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 23:31 queuedata.json
[2025-11-25 06:14:55] -rwx------ 1 boincer umatlas     36292 Nov 23 23:33 runpilot2-wrapper.sh
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas       100 Nov 24 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:14:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 23:48 run_atlas
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas       105 Nov 24 23:48 job.xml
[2025-11-25 06:14:55] -rw-r--r-- 2 boincer umatlas 408888829 Nov 24 23:48 EVNT.47483658._001217.pool.root.1
[2025-11-25 06:14:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:48 start_atlas.sh
[2025-11-25 06:14:55] drwxrwx--x 2 boincer umatlas      4096 Nov 24 23:48 shared
[2025-11-25 06:14:55] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 23:48 input.tar.gz
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas         0 Nov 24 23:48 boinc_lockfile
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 23:48 pandaJob.out
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas        57 Nov 24 23:48 setup.sh.local
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas    991801 Nov 24 23:48 agis_schedconf.cvmfs.json
[2025-11-25 06:14:55] drwx------ 5 boincer umatlas      4096 Nov 24 23:48 pilot3
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas       533 Nov 25 06:05 boinc_task_state.xml
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 06:12 init_data.xml
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas 914033103 Nov 25 06:13 HITS.47556149._002039.pool.root.1
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas      1061 Nov 25 06:14 memory_monitor_summary.json
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas   1516240 Nov 25 06:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas   2143859 Nov 25 06:14 log.47556149._002039.job.log.tgz.1
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas      8665 Nov 25 06:14 heartbeat.json
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas        29 Nov 25 06:14 wrapper_checkpoint.txt
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 06:14 boinc_mmap_file
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas        95 Nov 25 06:14 pilot_heartbeat.json
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas       744 Nov 25 06:14 pilotlog.txt
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas   3231668 Nov 25 06:14 log.47556149._002039.job.log.1
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas       353 Nov 25 06:14 output.list
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas       620 Nov 25 06:14 runtime_log
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas   5396480 Nov 25 06:14 result.tar.gz
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas       669 Nov 25 06:14 z3KKDmIRdh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOuIKDmT4RNhm.diag
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 06:14 runtime_log.err
[2025-11-25 06:14:55] -rw-r--r-- 1 boincer umatlas     21298 Nov 25 06:14 stderr.txt
[2025-11-25 06:14:55] HITS file was successfully produced:
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas 914033103 Nov 25 06:13 shared/HITS.pool.root.1
[2025-11-25 06:14:55]  *** Contents of shared directory: ***
[2025-11-25 06:14:55] total 1297792
[2025-11-25 06:14:55] -rw-r--r-- 2 boincer umatlas 408888829 Nov 24 23:48 ATLAS.root_0
[2025-11-25 06:14:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:48 start_atlas.sh
[2025-11-25 06:14:55] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 23:48 input.tar.gz
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas 914033103 Nov 25 06:13 HITS.pool.root.1
[2025-11-25 06:14:55] -rw------- 1 boincer umatlas   5396480 Nov 25 06:14 result.tar.gz
06:14:56 (31258): run_atlas exited; CPU time 262665.672657
06:14:56 (31258): called boinc_finish(0)

</stderr_txt>
]]>

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