Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:41 (1756519): wrapper (7.7.26015): starting
00:01:41 (1756519): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:01:41] Arguments: --nthreads 9
[2025-11-25 00:01:41] Threads: 9
[2025-11-25 00:01:41] Checking for CVMFS
[2025-11-25 00:01:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:01:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:01:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:01:43] 2.13.3.0 9393 28116 333720 153270 3 122 25464517 32935937 23871 16776704 0 102911632 99.527 124310067 39388 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:01:43] CVMFS is ok
[2025-11-25 00:01:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:01:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:01:43] Further information can be found at the LHC@home message board.
[2025-11-25 00:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:01:43] Checking for apptainer binary...
[2025-11-25 00:01:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:01:43] Running /usr/bin/apptainer --version
[2025-11-25 00:01:43] apptainer version 1.4.4-1.el9
[2025-11-25 00:01:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:01:44] c6-6-39-1.aglt2.org
[2025-11-25 00:01:44] apptainer works
[2025-11-25 00:01:44] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:01:44] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:01:44] Starting ATLAS job with PandaID=6895384678
[2025-11-25 00:01:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:38:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:38:55] 2025-11-26 08:26:40,610 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:38:55] 2025-11-26 08:26:40,612 | INFO     | sum of square deviations: 1308568246285.8591
[2025-11-26 03:38:55] 2025-11-26 08:26:40,752 | INFO     | sum of deviations: 6810482719934.511
[2025-11-26 03:38:55] 2025-11-26 08:26:40,753 | INFO     | mean x: 1764096293.134282
[2025-11-26 03:38:55] 2025-11-26 08:26:40,754 | INFO     | mean y: 3030289.532178218
[2025-11-26 03:38:55] 2025-11-26 08:26:40,754 | INFO     | intersect: -9178261824.801304
[2025-11-26 03:38:55] 2025-11-26 08:26:40,756 | INFO     | chi2: 12.273001283695981
[2025-11-26 03:38:55] 2025-11-26 08:26:40,762 | INFO     | sum of square deviations: 1296460061947.4648
[2025-11-26 03:38:55] 2025-11-26 08:26:40,881 | INFO     | sum of deviations: 7392536383916.374
[2025-11-26 03:38:55] 2025-11-26 08:26:40,885 | INFO     | mean x: 1764096140.6393545
[2025-11-26 03:38:55] 2025-11-26 08:26:40,886 | INFO     | mean y: 3037619.811297331
[2025-11-26 03:38:55] 2025-11-26 08:26:40,886 | INFO     | intersect: -10056003369.706928
[2025-11-26 03:38:55] 2025-11-26 08:26:40,888 | INFO     | chi2: 8.902131785787395
[2025-11-26 03:38:55] 2025-11-26 08:26:40,888 | INFO     | current chi2=8.902131785787395 (change=27.465730834613407 %)
[2025-11-26 03:38:55] 2025-11-26 08:26:40,893 | INFO     | sum of square deviations: 1284426710855.7747
[2025-11-26 03:38:55] 2025-11-26 08:26:40,977 | INFO     | sum of deviations: 8033870452365.559
[2025-11-26 03:38:55] 2025-11-26 08:26:40,977 | INFO     | mean x: 1764095988.1438355
[2025-11-26 03:38:55] 2025-11-26 08:26:40,977 | INFO     | mean y: 3045746.6382316314
[2025-11-26 03:38:55] 2025-11-26 08:26:40,977 | INFO     | intersect: -11031074389.996628
[2025-11-26 03:38:55] 2025-11-26 08:26:40,984 | INFO     | chi2: 4.990016072954683
[2025-11-26 03:38:55] 2025-11-26 08:26:40,984 | INFO     | current chi2=4.990016072954683 (change=43.94583013339074 %)
[2025-11-26 03:38:55] 2025-11-26 08:26:40,986 | INFO     | sum of square deviations: 1272468059205.019
[2025-11-26 03:38:55] 2025-11-26 08:26:41,076 | INFO     | sum of deviations: 8450918673409.406
[2025-11-26 03:38:55] 2025-11-26 08:26:41,076 | INFO     | mean x: 1764095835.6483448
[2025-11-26 03:38:55] 2025-11-26 08:26:41,077 | INFO     | mean y: 3051060.37726421
[2025-11-26 03:38:55] 2025-11-26 08:26:41,077 | INFO     | intersect: -11712944741.10349
[2025-11-26 03:38:55] 2025-11-26 08:26:41,078 | INFO     | chi2: 2.8080133857351424
[2025-11-26 03:38:55] 2025-11-26 08:26:41,079 | INFO     | current chi2=2.8080133857351424 (change=43.72736791461947 %)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,084 | INFO     | sum of square deviations: 1260583483429.9104
[2025-11-26 03:38:55] 2025-11-26 08:26:41,188 | INFO     | sum of deviations: 8526222899986.847
[2025-11-26 03:38:55] 2025-11-26 08:26:41,197 | INFO     | mean x: 1764095683.1503758
[2025-11-26 03:38:55] 2025-11-26 08:26:41,197 | INFO     | mean y: 3052024.8214285714
[2025-11-26 03:38:55] 2025-11-26 08:26:41,197 | INFO     | intersect: -11928782089.425058
[2025-11-26 03:38:55] 2025-11-26 08:26:41,199 | INFO     | chi2: 2.582048181754745
[2025-11-26 03:38:55] 2025-11-26 08:26:41,199 | INFO     | current chi2=2.582048181754745 (change=8.047155513157904 %)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,199 | INFO     | right removable region: 1595
[2025-11-26 03:38:55] 2025-11-26 08:26:41,205 | INFO     | sum of square deviations: 1296458647604.0166
[2025-11-26 03:38:55] 2025-11-26 08:26:41,294 | INFO     | sum of deviations: 6313000313201.984
[2025-11-26 03:38:55] 2025-11-26 08:26:41,295 | INFO     | mean x: 1764096445.638113
[2025-11-26 03:38:55] 2025-11-26 08:26:41,295 | INFO     | mean y: 3036550.6517690876
[2025-11-26 03:38:55] 2025-11-26 08:26:41,295 | INFO     | intersect: -8587088120.438752
[2025-11-26 03:38:55] 2025-11-26 08:26:41,297 | INFO     | chi2: 9.918992771194553
[2025-11-26 03:38:55] 2025-11-26 08:26:41,297 | INFO     | current chi2=9.918992771194553 (change=19.18038186493634 %)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,297 | INFO     | left removable region: 10
[2025-11-26 03:38:55] 2025-11-26 08:26:41,303 | INFO     | sum of square deviations: 1234696930312.2246
[2025-11-26 03:38:55] 2025-11-26 08:26:41,369 | INFO     | sum of deviations: 7873270460595.934
[2025-11-26 03:38:55] 2025-11-26 08:26:41,369 | INFO     | mean x: 1764095957.6548896
[2025-11-26 03:38:55] 2025-11-26 08:26:41,370 | INFO     | mean y: 3060129.460567823
[2025-11-26 03:38:55] 2025-11-26 08:26:41,370 | INFO     | intersect: -11246019909.597033
[2025-11-26 03:38:55] 2025-11-26 08:26:41,371 | INFO     | chi2: 0.12508548642322384
[2025-11-26 03:38:55] 2025-11-26 08:26:41,372 | INFO     | current memory leak: 6.38 B/s (using 1585 data points, chi2=0.13)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,373 | INFO     | could have reported an average CPU frequency of 2975 MHz (57 samples)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,373 | INFO     | ..............................
[2025-11-26 03:38:55] 2025-11-26 08:26:41,373 | INFO     | . Timing measurements:
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | . get job = 0 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | . initial setup = 5 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | . payload setup = 26 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | . stage-in = 0 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | . payload execution = 98551 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | . stage-out = 8 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | . log creation = 2 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,374 | INFO     | ..............................
[2025-11-26 03:38:55] 2025-11-26 08:26:41,583 | INFO     | 
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | job summary report
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | --------------------------------------------------
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | PanDA job id: 6895384678
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | task id: 47556149
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | errors: (none)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | pilot state: finished 
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | transexitcode: 0
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | exeerrorcode: 0
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | exeerrordiag: 
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | exitcode: 0
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | exitmsg: OK
[2025-11-26 03:38:55] 2025-11-26 08:26:41,587 | INFO     | cpuconsumptiontime: 249543 s
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | nevents: 1000
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | neventsw: 0
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | pid: 1794718
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | pgrp: 1794718
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | corecount: 9
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | event service: False
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | sizes: {0: 2284310, 1: 2284310, 12: 2284338, 17: 2284628, 22: 2284656, 98580: 2355126, 98589: 2364153, 98590: 2364209, 98613: 2364455}
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | --------------------------------------------------
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | 
[2025-11-26 03:38:55] 2025-11-26 08:26:41,588 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 03:38:55] 2025-11-26 08:26:41,651 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,651 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,651 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,651 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:38:55] 2025-11-26 08:26:41,653 | INFO     | job 6895384678 has completed (purged errors)
[2025-11-26 03:38:55] 2025-11-26 08:26:41,653 | INFO     | overall cleanup function is called
[2025-11-26 03:38:55] 2025-11-26 08:26:42,682 | INFO     | --- collectZombieJob: --- 10, [1794718]
[2025-11-26 03:38:55] 2025-11-26 08:26:42,683 | INFO     | zombie collector waiting for pid 1794718
[2025-11-26 03:38:55] 2025-11-26 08:26:42,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:38:55] 2025-11-26 08:26:42,683 | INFO     | collected zombie processes
[2025-11-26 03:38:55] 2025-11-26 08:26:42,683 | INFO     | will attempt to kill all subprocesses of pid=1794718
[2025-11-26 03:38:55] 2025-11-26 08:26:43,698 | INFO     | process IDs to be killed: [1794718] (in reverse order)
[2025-11-26 03:38:55] 2025-11-26 08:26:43,910 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:38:55] 2025-11-26 08:26:43,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:38:55] 2025-11-26 08:26:43,948 | INFO     | did not find any defunct processes belonging to 1794718
[2025-11-26 03:38:55] 2025-11-26 08:26:43,995 | INFO     | did not find any defunct processes belonging to 1794718
[2025-11-26 03:38:55] 2025-11-26 08:26:44,008 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:38:55] 2025-11-26 08:26:44,009 | INFO     | ready for new job
[2025-11-26 03:38:55] 2025-11-26 08:26:44,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:38:55] 2025-11-26 08:26:44,040 | INFO     | ***************************************
[2025-11-26 03:38:55] 2025-11-26 08:26:44,040 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:38:55] 2025-11-26 08:26:44,040 | INFO     | ***************************************
[2025-11-26 03:38:55] 2025-11-26 08:26:44,040 | INFO     | 
[2025-11-26 03:38:55] 2025-11-26 08:26:44,043 | INFO     | architecture information:
[2025-11-26 03:38:55] 2025-11-26 08:26:44,056 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:38:55] 2025-11-26 08:26:44,122 | INFO     | cat /etc/os-release:
[2025-11-26 03:38:55] NAME="CentOS Linux"
[2025-11-26 03:38:55] VERSION="7 (Core)"
[2025-11-26 03:38:55] ID="centos"
[2025-11-26 03:38:55] ID_LIKE="rhel fedora"
[2025-11-26 03:38:55] VERSION_ID="7"
[2025-11-26 03:38:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:38:55] ANSI_COLOR="0;31"
[2025-11-26 03:38:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:38:55] HOME_URL="https://www.centos.org/"
[2025-11-26 03:38:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:38:55] 
[2025-11-26 03:38:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:38:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:38:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:38:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:38:55] 
[2025-11-26 03:38:55] 2025-11-26 08:26:44,122 | INFO     | ***************************************
[2025-11-26 03:38:55] 2025-11-26 08:26:44,627 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 03:38:55] 2025-11-26 08:26:44,704 | INFO     | sufficient remaining disk space (68966940672 B)
[2025-11-26 03:38:55] 2025-11-26 08:26:44,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:38:55] 2025-11-26 08:26:44,705 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:38:55] 2025-11-26 08:26:44,705 | INFO     | update_server=False
[2025-11-26 03:38:55] 2025-11-26 08:26:44,705 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:38:55] 2025-11-26 08:26:44,882 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 03:38:55] 2025-11-26 08:26:44,882 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 03:38:55] 2025-11-26 08:26:44,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:38:55] 2025-11-26 08:26:44,882 | INFO     | will abort loop
[2025-11-26 03:38:55] 2025-11-26 08:26:45,283 | INFO     | all data control threads have been joined
[2025-11-26 03:38:55] 2025-11-26 08:26:45,354 | INFO     | all payload control threads have been joined
[2025-11-26 03:38:55] 2025-11-26 08:26:45,710 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:45,882 | INFO     | [job] validate thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:45,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:38:55] 2025-11-26 08:26:45,905 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:45,986 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,229 | INFO     | all job control threads have been joined
[2025-11-26 03:38:55] 2025-11-26 08:26:46,290 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,291 | INFO     | [data] control thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:38:55] 2025-11-26 08:26:46,361 | INFO     | [payload] control thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,431 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,450 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,455 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,475 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:46,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:38:55] 2025-11-26 08:26:46,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:47,234 | INFO     | [job] control thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:47,616 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:47,893 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:26:50,396 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:38:55] 2025-11-26 08:27:15,967 | INFO     | PID=1767407 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 03:38:55] 2025-11-26 08:27:15,967 | INFO     | .. there are 33 such processes running
[2025-11-26 03:38:55] 2025-11-26 08:27:15,968 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:38:55] 2025-11-26 08:27:15,968 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:38:55] 2025-11-26 08:27:15,968 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:38:55] 2025-11-26 08:27:24,695 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:38:55] 2025-11-26 08:27:25,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624959113024)>', '<ExcThread(monitor, started 139624311662336)>']
[2025-11-26 03:38:55] 2025-11-26 08:27:26,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:38:55] 2025-11-26 08:27:26,054 | INFO     | [monitor] control thread has ended
[2025-11-26 03:38:55] 2025-11-26 08:27:30,361 | INFO     | all workflow threads have been joined
[2025-11-26 03:38:55] 2025-11-26 08:27:30,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:38:55] 2025-11-26 08:27:30,362 | INFO     | traces error code: 0
[2025-11-26 03:38:55] 2025-11-26 08:27:30,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:38:55] 2025-11-26 08:27:30,894 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:38:55] 2025-11-26 08:27:30,910 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:38:55] 2025-11-26 08:27:30,928 [wrapper] pilotpid: 1767407
[2025-11-26 03:38:55] 2025-11-26 08:27:30,949 [wrapper] Pilot exit status: 0
[2025-11-26 03:38:55] 2025-11-26 08:27:31,021 [wrapper] pandaids: 6895384678
[2025-11-26 03:38:55] 2025-11-26 08:27:31,301 [wrapper] cleanup supervisor_pilot 3142483 1767408
[2025-11-26 03:38:55] 2025-11-26 08:27:31,317 [wrapper] Test setup, not cleaning
[2025-11-26 03:38:55] 2025-11-26 08:27:31,343 [wrapper] apfmon messages muted
[2025-11-26 03:38:55] 2025-11-26 08:27:31,357 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:38:55] 2025-11-26 08:27:31,365 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:38:55]  *** Error codes and diagnostics ***
[2025-11-26 03:38:55]     "exeErrorCode": 0,
[2025-11-26 03:38:55]     "exeErrorDiag": "",
[2025-11-26 03:38:55]     "pilotErrorCode": 0,
[2025-11-26 03:38:55]     "pilotErrorDiag": "",
[2025-11-26 03:38:55]  *** Listing of results directory ***
[2025-11-26 03:38:55] total 1325436
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:05 queuedata.json
[2025-11-26 03:38:55] -rwx------. 1 boincer umatlas     36292 Nov 24 00:06 runpilot2-wrapper.sh
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:38:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:01 run_atlas
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:01 job.xml
[2025-11-26 03:38:55] -rw-r--r--. 2 boincer umatlas 410977951 Nov 25 00:01 EVNT.47483658._001227.pool.root.1
[2025-11-26 03:38:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-26 03:38:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:01 shared
[2025-11-26 03:38:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:01 input.tar.gz
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:01 boinc_lockfile
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:01 pandaJob.out
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas        57 Nov 25 00:01 setup.sh.local
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas    991801 Nov 25 00:02 agis_schedconf.cvmfs.json
[2025-11-26 03:38:55] drwx------. 5 boincer umatlas      4096 Nov 25 00:02 pilot3
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas       533 Nov 26 03:06 boinc_task_state.xml
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas 912032149 Nov 26 03:25 HITS.47556149._002132.pool.root.1
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas      1058 Nov 26 03:26 memory_monitor_summary.json
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas   1516240 Nov 26 03:26 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas   2697240 Nov 26 03:26 log.47556149._002132.job.log.tgz.1
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas      8628 Nov 26 03:26 heartbeat.json
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas        95 Nov 26 03:27 pilot_heartbeat.json
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas      5010 Nov 26 03:27 pilotlog.txt
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas  12457727 Nov 26 03:27 log.47556149._002132.job.log.1
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas       353 Nov 26 03:27 output.list
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas       620 Nov 26 03:27 runtime_log
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas  15175680 Nov 26 03:27 result.tar.gz
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 03:27 runtime_log.err
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas       661 Nov 26 03:27 ntBMDmFxdh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdRLKDmjVCHon.diag
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas      6845 Nov 26 03:38 init_data.xml
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 03:38 boinc_mmap_file
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas        29 Nov 26 03:38 wrapper_checkpoint.txt
[2025-11-26 03:38:55] -rw-r--r--. 1 boincer umatlas     21170 Nov 26 03:38 stderr.txt
[2025-11-26 03:38:55] HITS file was successfully produced:
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas 912032149 Nov 26 03:25 shared/HITS.pool.root.1
[2025-11-26 03:38:55]  *** Contents of shared directory: ***
[2025-11-26 03:38:55] total 1307432
[2025-11-26 03:38:55] -rw-r--r--. 2 boincer umatlas 410977951 Nov 25 00:01 ATLAS.root_0
[2025-11-26 03:38:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-26 03:38:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:01 input.tar.gz
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas 912032149 Nov 26 03:25 HITS.pool.root.1
[2025-11-26 03:38:55] -rw-------. 1 boincer umatlas  15175680 Nov 26 03:27 result.tar.gz
03:38:57 (1756519): run_atlas exited; CPU time 251591.689927
03:38:57 (1756519): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN