Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:41:06 (1837886): wrapper (7.7.26015): starting
14:41:06 (1837886): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 14:41:06] Arguments: --nthreads 3
[2025-11-27 14:41:06] Threads: 3
[2025-11-27 14:41:06] Checking for CVMFS
[2025-11-27 14:41:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 14:41:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 14:41:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 14:41:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 14:41:07] 2.9.2.0 52203 13354 98612 153366 1 56 28295471 36864000 0 130560 0 4969523 99.943 643781 3714 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 14:41:07] CVMFS is ok
[2025-11-27 14:41:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 14:41:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 14:41:07] Further information can be found at the LHC@home message board.
[2025-11-27 14:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 14:41:07] Checking for apptainer binary...
[2025-11-27 14:41:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 14:41:07] Running /usr/bin/apptainer --version
[2025-11-27 14:41:07] apptainer version 1.4.1-1.1
[2025-11-27 14:41:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 14:41:07] thA371b
[2025-11-27 14:41:07] apptainer works
[2025-11-27 14:41:07] Set ATHENA_PROC_NUMBER=3
[2025-11-27 14:41:07] Set ATHENA_CORE_NUMBER=3
[2025-11-27 14:41:07] Starting ATLAS job with PandaID=6895385162
[2025-11-27 14:41:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:36:51]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:36:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:36:51] ANSI_COLOR="0;31"
[2025-11-27 22:36:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:36:51] HOME_URL="https://www.centos.org/"
[2025-11-27 22:36:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:36:51] 
[2025-11-27 22:36:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:36:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:36:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:36:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:36:51] 
[2025-11-27 22:36:51] 2025-11-27 21:35:53,225 | INFO     | ***************************************
[2025-11-27 22:36:51] 2025-11-27 21:35:53,728 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 22:36:51] 2025-11-27 21:35:53,741 | INFO     | sufficient remaining disk space (228096737280 B)
[2025-11-27 22:36:51] 2025-11-27 21:35:53,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:36:51] 2025-11-27 21:35:53,741 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:36:51] 2025-11-27 21:35:53,741 | INFO     | update_server=False
[2025-11-27 22:36:51] 2025-11-27 21:35:53,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:36:51] 2025-11-27 21:35:53,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:36:51] 2025-11-27 21:35:53,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:36:51] 2025-11-27 21:35:53,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:36:51] 2025-11-27 21:35:53,898 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 22:36:51] 2025-11-27 21:35:53,898 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 22:36:51] 2025-11-27 21:35:53,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:36:51] 2025-11-27 21:35:53,898 | INFO     | will abort loop
[2025-11-27 22:36:51] 2025-11-27 21:35:54,023 | INFO     | all payload control threads have been joined
[2025-11-27 22:36:51] 2025-11-27 21:35:54,421 | INFO     | all data control threads have been joined
[2025-11-27 22:36:51] 2025-11-27 21:35:54,745 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:54,747 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:54,904 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:54,946 | INFO     | all job control threads have been joined
[2025-11-27 22:36:51] 2025-11-27 21:35:55,025 | INFO     | [payload] control thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:55,265 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:55,427 | INFO     | [data] control thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:55,627 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:55,747 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:55,952 | INFO     | [job] control thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:56,074 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:56,130 | INFO     | [job] validate thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:56,130 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:56,189 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:56,342 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:35:57,747 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:36:03,971 | INFO     | job.realtimelogging is not enabled
[2025-11-27 22:36:51] 2025-11-27 21:36:04,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:36:51] 2025-11-27 21:36:23,919 | INFO     | PID=1841604 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 22:36:51] 2025-11-27 21:36:23,919 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:36:51] 2025-11-27 21:36:23,920 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:36:51] 2025-11-27 21:36:23,920 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:36:51] 2025-11-27 21:36:45,941 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:36:51] 2025-11-27 21:36:46,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528655992640)>', '<ExcThread(monitor, started 140528016410368)>']
[2025-11-27 22:36:51] 2025-11-27 21:36:47,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:36:51] 2025-11-27 21:36:47,040 | INFO     | [monitor] control thread has ended
[2025-11-27 22:36:51] 2025-11-27 21:36:51,187 | INFO     | all workflow threads have been joined
[2025-11-27 22:36:51] 2025-11-27 21:36:51,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:36:51] 2025-11-27 21:36:51,187 | INFO     | traces error code: 0
[2025-11-27 22:36:51] 2025-11-27 21:36:51,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:36:51] 2025-11-27 21:36:51,238 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:36:51] 2025-11-27 21:36:51,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:36:51] 2025-11-27 21:36:51,243 [wrapper] pilotpid: 1841604
[2025-11-27 22:36:51] 2025-11-27 21:36:51,245 [wrapper] Pilot exit status: 0
[2025-11-27 22:36:51] 2025-11-27 21:36:51,252 [wrapper] pandaids: 6895385162
[2025-11-27 22:36:51] 2025-11-27 21:36:51,268 [wrapper] cleanup supervisor_pilot 1897633 1841605
[2025-11-27 22:36:51] 2025-11-27 21:36:51,271 [wrapper] Test setup, not cleaning
[2025-11-27 22:36:51] 2025-11-27 21:36:51,273 [wrapper] apfmon messages muted
[2025-11-27 22:36:51] 2025-11-27 21:36:51,275 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:36:51] 2025-11-27 21:36:51,277 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:36:51]  *** Error codes and diagnostics ***
[2025-11-27 22:36:51]     "exeErrorCode": 0,
[2025-11-27 22:36:51]     "exeErrorDiag": "",
[2025-11-27 22:36:51]     "pilotErrorCode": 0,
[2025-11-27 22:36:51]     "pilotErrorDiag": "",
[2025-11-27 22:36:51]  *** Listing of results directory ***
[2025-11-27 22:36:51] total 1311460
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc    576529 Nov 24 05:40 pilot3.tar.gz
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc      5112 Nov 24 06:07 queuedata.json
[2025-11-27 22:36:51] -rwx------ 1 boinc boinc     36292 Nov 24 06:08 runpilot2-wrapper.sh
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc       100 Nov 27 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:36:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 14:41 run_atlas
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc       105 Nov 27 14:41 job.xml
[2025-11-27 22:36:51] -rw-r--r-- 2 boinc boinc 410713671 Nov 27 14:41 EVNT.47483658._001233.pool.root.1
[2025-11-27 22:36:51] -rw-r--r-- 2 boinc boinc    590103 Nov 27 14:41 input.tar.gz
[2025-11-27 22:36:51] -rw-r--r-- 2 boinc boinc     15847 Nov 27 14:41 start_atlas.sh
[2025-11-27 22:36:51] drwxrwx--x 2 boinc boinc      4096 Nov 27 14:41 shared
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc         0 Nov 27 14:41 boinc_setup_complete
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc      6441 Nov 27 14:41 init_data.xml
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc         0 Nov 27 14:41 boinc_lockfile
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc      2786 Nov 27 14:41 pandaJob.out
[2025-11-27 22:36:51] -rw------- 1 boinc boinc    991588 Nov 27 14:41 agis_schedconf.cvmfs.json
[2025-11-27 22:36:51] drwx------ 5 boinc boinc      4096 Nov 27 14:41 pilot3
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc       531 Nov 27 22:32 boinc_task_state.xml
[2025-11-27 22:36:51] -rw------- 1 boinc boinc 917971724 Nov 27 22:35 HITS.47556149._002199.pool.root.1
[2025-11-27 22:36:51] -rw------- 1 boinc boinc        95 Nov 27 22:35 pilot_heartbeat.json
[2025-11-27 22:36:51] -rw------- 1 boinc boinc      1023 Nov 27 22:35 memory_monitor_summary.json
[2025-11-27 22:36:51] -rw------- 1 boinc boinc   1516240 Nov 27 22:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:36:51] -rw------- 1 boinc boinc   1161469 Nov 27 22:35 log.47556149._002199.job.log.tgz.1
[2025-11-27 22:36:51] -rw------- 1 boinc boinc      8565 Nov 27 22:35 heartbeat.json
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc        28 Nov 27 22:36 wrapper_checkpoint.txt
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc      8192 Nov 27 22:36 boinc_mmap_file
[2025-11-27 22:36:51] -rw------- 1 boinc boinc      5010 Nov 27 22:36 pilotlog.txt
[2025-11-27 22:36:51] -rw------- 1 boinc boinc   4008097 Nov 27 22:36 log.47556149._002199.job.log.1
[2025-11-27 22:36:51] -rw------- 1 boinc boinc       353 Nov 27 22:36 output.list
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc       620 Nov 27 22:36 runtime_log
[2025-11-27 22:36:51] -rw------- 1 boinc boinc   5191680 Nov 27 22:36 result.tar.gz
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc      8903 Nov 27 22:36 runtime_log.err
[2025-11-27 22:36:51] -rw------- 1 boinc boinc       666 Nov 27 22:36 dUjKDmrzdh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoRLKDmka5Q4m.diag
[2025-11-27 22:36:51] -rw-r--r-- 1 boinc boinc      8833 Nov 27 22:36 stderr.txt
[2025-11-27 22:36:51] HITS file was successfully produced:
[2025-11-27 22:36:51] -rw------- 1 boinc boinc 917971724 Nov 27 22:35 shared/HITS.pool.root.1
[2025-11-27 22:36:51]  *** Contents of shared directory: ***
[2025-11-27 22:36:51] total 1303224
[2025-11-27 22:36:51] -rw-r--r-- 2 boinc boinc 410713671 Nov 27 14:41 ATLAS.root_0
[2025-11-27 22:36:51] -rw-r--r-- 2 boinc boinc    590103 Nov 27 14:41 input.tar.gz
[2025-11-27 22:36:51] -rw-r--r-- 2 boinc boinc     15847 Nov 27 14:41 start_atlas.sh
[2025-11-27 22:36:51] -rw------- 1 boinc boinc 917971724 Nov 27 22:35 HITS.pool.root.1
[2025-11-27 22:36:51] -rw------- 1 boinc boinc   5191680 Nov 27 22:36 result.tar.gz
22:36:52 (1837886): run_atlas exited; CPU time 84138.165505
22:36:52 (1837886): called boinc_finish(0)

</stderr_txt>
]]>

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