Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:50:31 (21875): wrapper (7.7.26015): starting
23:50:31 (21875): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:50:31] Arguments: --nthreads 8
[2025-11-24 23:50:31] Threads: 8
[2025-11-24 23:50:31] Checking for CVMFS
[2025-11-24 23:50:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:50:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:50:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:50:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:50:32] 2.11.2.0 2966 2964 69144 153270 0 81 15042586 20275201 1 130560 0 1017785 99.979 102904 37832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 23:50:32] CVMFS is ok
[2025-11-24 23:50:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:50:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:50:32] Further information can be found at the LHC@home message board.
[2025-11-24 23:50:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:50:32] Checking for apptainer binary...
[2025-11-24 23:50:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:50:32] Running /usr/bin/apptainer --version
[2025-11-24 23:50:32] apptainer version 1.3.2-1.el7
[2025-11-24 23:50:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:50:34] c-204-25.aglt2.org
[2025-11-24 23:50:34] apptainer works
[2025-11-24 23:50:34] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:50:34] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:50:34] Starting ATLAS job with PandaID=6895328068
[2025-11-24 23:50:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:29:23]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:29:23] 2025-11-25 17:28:51,252 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:29:23] 2025-11-25 17:28:51,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:29:23] 2025-11-25 17:28:51,264 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:29:23] 2025-11-25 17:28:51,265 | INFO     | sum of square deviations: 128217017701.81223
[2025-11-25 12:29:23] 2025-11-25 17:28:51,281 | INFO     | sum of deviations: 791776901369.0676
[2025-11-25 12:29:23] 2025-11-25 17:28:51,282 | INFO     | mean x: 1764068975.577181
[2025-11-25 12:29:23] 2025-11-25 17:28:51,282 | INFO     | mean y: 3329374.8510067114
[2025-11-25 12:29:23] 2025-11-25 17:28:51,282 | INFO     | intersect: -10890303095.467043
[2025-11-25 12:29:23] 2025-11-25 17:28:51,283 | INFO     | chi2: 6.62750607628496
[2025-11-25 12:29:23] 2025-11-25 17:28:51,284 | INFO     | sum of square deviations: 125652877515.13506
[2025-11-25 12:29:23] 2025-11-25 17:28:51,295 | INFO     | sum of deviations: 1065586392511.2168
[2025-11-25 12:29:23] 2025-11-25 17:28:51,295 | INFO     | mean x: 1764068823.0810812
[2025-11-25 12:29:23] 2025-11-25 17:28:51,296 | INFO     | mean y: 3345653.5297297295
[2025-11-25 12:29:23] 2025-11-25 17:28:51,296 | INFO     | intersect: -14956659803.584108
[2025-11-25 12:29:23] 2025-11-25 17:28:51,297 | INFO     | chi2: 3.750705890758783
[2025-11-25 12:29:23] 2025-11-25 17:28:51,297 | INFO     | current chi2=3.750705890758783 (change=43.40697922285065 %)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,298 | INFO     | sum of square deviations: 123123156578.43535
[2025-11-25 12:29:23] 2025-11-25 17:28:51,309 | INFO     | sum of deviations: 1221773889223.2788
[2025-11-25 12:29:23] 2025-11-25 17:28:51,309 | INFO     | mean x: 1764068670.5850341
[2025-11-25 12:29:23] 2025-11-25 17:28:51,309 | INFO     | mean y: 3355064.443537415
[2025-11-25 12:29:23] 2025-11-25 17:28:51,309 | INFO     | intersect: -17501825117.844845
[2025-11-25 12:29:23] 2025-11-25 17:28:51,310 | INFO     | chi2: 2.7363402589905435
[2025-11-25 12:29:23] 2025-11-25 17:28:51,310 | INFO     | current chi2=2.7363402589905435 (change=27.0446593604552 %)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,311 | INFO     | sum of square deviations: 120627577738.38797
[2025-11-25 12:29:23] 2025-11-25 17:28:51,322 | INFO     | sum of deviations: 1232736945422.2593
[2025-11-25 12:29:23] 2025-11-25 17:28:51,322 | INFO     | mean x: 1764068518.0876713
[2025-11-25 12:29:23] 2025-11-25 17:28:51,323 | INFO     | mean y: 3355726.4178082193
[2025-11-25 12:29:23] 2025-11-25 17:28:51,323 | INFO     | intersect: -18024299949.626842
[2025-11-25 12:29:23] 2025-11-25 17:28:51,323 | INFO     | chi2: 2.646580816947672
[2025-11-25 12:29:23] 2025-11-25 17:28:51,324 | INFO     | current chi2=2.646580816947672 (change=3.280273414388329 %)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,324 | INFO     | right removable region: 729
[2025-11-25 12:29:23] 2025-11-25 17:28:51,325 | INFO     | sum of square deviations: 125652615215.13504
[2025-11-25 12:29:23] 2025-11-25 17:28:51,336 | INFO     | sum of deviations: 545819391420.4852
[2025-11-25 12:29:23] 2025-11-25 17:28:51,336 | INFO     | mean x: 1764069128.0810812
[2025-11-25 12:29:23] 2025-11-25 17:28:51,336 | INFO     | mean y: 3343978.041891892
[2025-11-25 12:29:23] 2025-11-25 17:28:51,336 | INFO     | intersect: -7659553736.13878
[2025-11-25 12:29:23] 2025-11-25 17:28:51,337 | INFO     | chi2: 4.172653742532506
[2025-11-25 12:29:23] 2025-11-25 17:28:51,337 | INFO     | current chi2=4.172653742532506 (change=37.04036338097963 %)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,338 | INFO     | sum of square deviations: 123122722258.77005
[2025-11-25 12:29:23] 2025-11-25 17:28:51,350 | INFO     | sum of deviations: 496000540053.8761
[2025-11-25 12:29:23] 2025-11-25 17:28:51,350 | INFO     | mean x: 1764069280.5823128
[2025-11-25 12:29:23] 2025-11-25 17:28:51,350 | INFO     | mean y: 3346979.3904761905
[2025-11-25 12:29:23] 2025-11-25 17:28:51,350 | INFO     | intersect: -7103215479.668172
[2025-11-25 12:29:23] 2025-11-25 17:28:51,351 | INFO     | chi2: 4.123928821724495
[2025-11-25 12:29:23] 2025-11-25 17:28:51,351 | INFO     | current chi2=4.123928821724495 (change=1.167720204323462 %)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,351 | INFO     | left removable region: 20
[2025-11-25 12:29:23] 2025-11-25 17:28:51,352 | INFO     | sum of square deviations: 110513489598.43741
[2025-11-25 12:29:23] 2025-11-25 17:28:51,362 | INFO     | sum of deviations: 882643942728.8206
[2025-11-25 12:29:23] 2025-11-25 17:28:51,363 | INFO     | mean x: 1764069097.5980253
[2025-11-25 12:29:23] 2025-11-25 17:28:51,363 | INFO     | mean y: 3377236.7291960507
[2025-11-25 12:29:23] 2025-11-25 17:28:51,363 | INFO     | intersect: -14085806890.9975
[2025-11-25 12:29:23] 2025-11-25 17:28:51,364 | INFO     | chi2: 0.10896906959994372
[2025-11-25 12:29:23] 2025-11-25 17:28:51,364 | INFO     | current memory leak: 7.99 B/s (using 709 data points, chi2=0.11)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,364 | INFO     | could have reported an average CPU frequency of 2179 MHz (28 samples)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | ..............................
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . Timing measurements:
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . get job = 0 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . initial setup = 2 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . payload setup = 8 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . stage-in = 0 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . payload execution = 45439 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . stage-out = 3 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,365 | INFO     | . log creation = 0 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,366 | INFO     | ..............................
[2025-11-25 12:29:23] 2025-11-25 17:28:51,456 | INFO     | 
[2025-11-25 12:29:23] 2025-11-25 17:28:51,456 | INFO     | job summary report
[2025-11-25 12:29:23] 2025-11-25 17:28:51,456 | INFO     | --------------------------------------------------
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | PanDA job id: 6895328068
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | task id: 47556137
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | errors: (none)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | pilot state: finished 
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | transexitcode: 0
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | exeerrorcode: 0
[2025-11-25 12:29:23] 2025-11-25 17:28:51,457 | INFO     | exeerrordiag: 
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | exitcode: 0
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | exitmsg: OK
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | cpuconsumptiontime: 351700 s
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | nevents: 1000
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | neventsw: 0
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | pid: 32107
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | pgrp: 32107
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | corecount: 8
[2025-11-25 12:29:23] 2025-11-25 17:28:51,458 | INFO     | event service: False
[2025-11-25 12:29:23] 2025-11-25 17:28:51,459 | INFO     | sizes: {0: 2284306, 6: 2284568, 11: 2284596, 45451: 2330688, 45455: 2339687, 45456: 2339743, 45462: 2340117}
[2025-11-25 12:29:23] 2025-11-25 17:28:51,459 | INFO     | --------------------------------------------------
[2025-11-25 12:29:23] 2025-11-25 17:28:51,459 | INFO     | 
[2025-11-25 12:29:23] 2025-11-25 17:28:51,459 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 12:29:23] 2025-11-25 17:28:51,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,490 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:29:23] 2025-11-25 17:28:51,491 | INFO     | job 6895328068 has completed (purged errors)
[2025-11-25 12:29:23] 2025-11-25 17:28:51,491 | INFO     | overall cleanup function is called
[2025-11-25 12:29:23] 2025-11-25 17:28:52,506 | INFO     | --- collectZombieJob: --- 10, [32107]
[2025-11-25 12:29:23] 2025-11-25 17:28:52,506 | INFO     | zombie collector waiting for pid 32107
[2025-11-25 12:29:23] 2025-11-25 17:28:52,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:29:23] 2025-11-25 17:28:52,513 | INFO     | collected zombie processes
[2025-11-25 12:29:23] 2025-11-25 17:28:52,513 | INFO     | will attempt to kill all subprocesses of pid=32107
[2025-11-25 12:29:23] 2025-11-25 17:28:52,611 | INFO     | process IDs to be killed: [32107] (in reverse order)
[2025-11-25 12:29:23] 2025-11-25 17:28:52,671 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:29:23] 2025-11-25 17:28:52,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:29:23] 2025-11-25 17:28:52,677 | INFO     | did not find any defunct processes belonging to 32107
[2025-11-25 12:29:23] 2025-11-25 17:28:52,681 | INFO     | did not find any defunct processes belonging to 32107
[2025-11-25 12:29:23] 2025-11-25 17:28:52,684 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:29:23] 2025-11-25 17:28:52,684 | INFO     | ready for new job
[2025-11-25 12:29:23] 2025-11-25 17:28:52,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:29:23] 2025-11-25 17:28:52,688 | INFO     | ***************************************
[2025-11-25 12:29:23] 2025-11-25 17:28:52,688 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:29:23] 2025-11-25 17:28:52,688 | INFO     | ***************************************
[2025-11-25 12:29:23] 2025-11-25 17:28:52,688 | INFO     | 
[2025-11-25 12:29:23] 2025-11-25 17:28:52,688 | INFO     | architecture information:
[2025-11-25 12:29:23] 2025-11-25 17:28:52,689 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:29:23] 2025-11-25 17:28:52,707 | INFO     | cat /etc/os-release:
[2025-11-25 12:29:23] NAME="CentOS Linux"
[2025-11-25 12:29:23] VERSION="7 (Core)"
[2025-11-25 12:29:23] ID="centos"
[2025-11-25 12:29:23] ID_LIKE="rhel fedora"
[2025-11-25 12:29:23] VERSION_ID="7"
[2025-11-25 12:29:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:29:23] ANSI_COLOR="0;31"
[2025-11-25 12:29:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:29:23] HOME_URL="https://www.centos.org/"
[2025-11-25 12:29:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:29:23] 
[2025-11-25 12:29:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:29:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:29:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:29:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:29:23] 
[2025-11-25 12:29:23] 2025-11-25 17:28:52,707 | INFO     | ***************************************
[2025-11-25 12:29:23] 2025-11-25 17:28:53,210 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 12:29:23] 2025-11-25 17:28:53,230 | INFO     | sufficient remaining disk space (17429430272 B)
[2025-11-25 12:29:23] 2025-11-25 17:28:53,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:29:23] 2025-11-25 17:28:53,231 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:29:23] 2025-11-25 17:28:53,231 | INFO     | update_server=False
[2025-11-25 12:29:23] 2025-11-25 17:28:53,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:29:23] 2025-11-25 17:28:53,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:29:23] 2025-11-25 17:28:53,262 | INFO     | all data control threads have been joined
[2025-11-25 12:29:23] 2025-11-25 17:28:53,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:29:23] 2025-11-25 17:28:53,390 | INFO     | aborting loop
[2025-11-25 12:29:23] 2025-11-25 17:28:53,802 | INFO     | all payload control threads have been joined
[2025-11-25 12:29:23] 2025-11-25 17:28:54,235 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:54,237 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:54,268 | INFO     | [data] control thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:54,393 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:54,489 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:54,579 | INFO     | all job control threads have been joined
[2025-11-25 12:29:23] 2025-11-25 17:28:54,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:29:23] 2025-11-25 17:28:54,776 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:54,809 | INFO     | [payload] control thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:55,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:29:23] 2025-11-25 17:28:55,583 | INFO     | [job] control thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:55,591 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:55,593 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:55,593 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:55,649 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:55,712 | INFO     | [job] validate thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:56,597 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:28:59,353 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:29:03,885 | INFO     | job.realtimelogging is not enabled
[2025-11-25 12:29:23] 2025-11-25 17:29:04,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:29:23] 2025-11-25 17:29:06,411 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:29:23] 2025-11-25 17:29:06,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049123682112)>', '<ExcThread(monitor, started 140047936382720)>']
[2025-11-25 12:29:23] 2025-11-25 17:29:11,521 | INFO     | all workflow threads have been joined
[2025-11-25 12:29:23] 2025-11-25 17:29:11,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:29:23] 2025-11-25 17:29:11,522 | INFO     | traces error code: 0
[2025-11-25 12:29:23] 2025-11-25 17:29:11,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:29:23] 2025-11-25 17:29:22,986 | INFO     | PID=25572 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 12:29:23] 2025-11-25 17:29:22,987 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:29:23] 2025-11-25 17:29:22,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:29:23] 2025-11-25 17:29:22,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:29:23] 2025-11-25 17:29:22,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:29:23] 2025-11-25 17:29:22,988 | INFO     | [monitor] control thread has ended
[2025-11-25 12:29:23] 2025-11-25 17:29:23,102 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:29:23] 2025-11-25 17:29:23,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:29:23] 2025-11-25 17:29:23,112 [wrapper] pilotpid: 25572
[2025-11-25 12:29:23] 2025-11-25 17:29:23,117 [wrapper] Pilot exit status: 0
[2025-11-25 12:29:23] 2025-11-25 17:29:23,133 [wrapper] pandaids: 6895328068
[2025-11-25 12:29:23] 2025-11-25 17:29:23,178 [wrapper] cleanup supervisor_pilot 30285 25575
[2025-11-25 12:29:23] 2025-11-25 17:29:23,183 [wrapper] Test setup, not cleaning
[2025-11-25 12:29:23] 2025-11-25 17:29:23,188 [wrapper] apfmon messages muted
[2025-11-25 12:29:23] 2025-11-25 17:29:23,193 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:29:23] 2025-11-25 17:29:23,197 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:29:23]  *** Error codes and diagnostics ***
[2025-11-25 12:29:23]     "exeErrorCode": 0,
[2025-11-25 12:29:23]     "exeErrorDiag": "",
[2025-11-25 12:29:23]     "pilotErrorCode": 0,
[2025-11-25 12:29:23]     "pilotErrorDiag": "",
[2025-11-25 12:29:23]  *** Listing of results directory ***
[2025-11-25 12:29:23] total 1325104
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 11:14 queuedata.json
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 11:16 pilot3.tar.gz
[2025-11-25 12:29:23] -rwx------ 1 boincer umatlas     36292 Nov 21 11:18 runpilot2-wrapper.sh
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas       100 Nov 24 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:29:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 23:50 run_atlas
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas       105 Nov 24 23:50 job.xml
[2025-11-25 12:29:23] -rw-r--r-- 2 boincer umatlas 409975451 Nov 24 23:50 EVNT.47483658._000060.pool.root.1
[2025-11-25 12:29:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:50 start_atlas.sh
[2025-11-25 12:29:23] drwxrwx--x 2 boincer umatlas      4096 Nov 24 23:50 shared
[2025-11-25 12:29:23] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 23:50 input.tar.gz
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas         0 Nov 24 23:50 boinc_lockfile
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas      2784 Nov 24 23:50 pandaJob.out
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas        57 Nov 24 23:50 setup.sh.local
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas    991801 Nov 24 23:50 agis_schedconf.cvmfs.json
[2025-11-25 12:29:23] drwx------ 5 boincer umatlas      4096 Nov 24 23:50 pilot3
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas       533 Nov 25 12:16 boinc_task_state.xml
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas      5912 Nov 25 12:20 init_data.xml
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas 926508408 Nov 25 12:28 HITS.47556137._000596.pool.root.1
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas      1064 Nov 25 12:28 memory_monitor_summary.json
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas   1516240 Nov 25 12:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas   1996415 Nov 25 12:28 log.47556137._000596.job.log.tgz.1
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas      8667 Nov 25 12:28 heartbeat.json
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 12:29 boinc_mmap_file
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas        29 Nov 25 12:29 wrapper_checkpoint.txt
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas        95 Nov 25 12:29 pilot_heartbeat.json
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas       745 Nov 25 12:29 pilotlog.txt
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas   6254332 Nov 25 12:29 log.47556137._000596.job.log.1
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas       353 Nov 25 12:29 output.list
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas       620 Nov 25 12:29 runtime_log
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas   8273920 Nov 25 12:29 result.tar.gz
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 12:29 runtime_log.err
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas       668 Nov 25 12:29 7osMDm20ig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvXJKDmiVey6m.diag
[2025-11-25 12:29:23] -rw-r--r-- 1 boincer umatlas     21075 Nov 25 12:29 stderr.txt
[2025-11-25 12:29:23] HITS file was successfully produced:
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas 926508408 Nov 25 12:28 shared/HITS.pool.root.1
[2025-11-25 12:29:23]  *** Contents of shared directory: ***
[2025-11-25 12:29:23] total 1313848
[2025-11-25 12:29:23] -rw-r--r-- 2 boincer umatlas 409975451 Nov 24 23:50 ATLAS.root_0
[2025-11-25 12:29:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:50 start_atlas.sh
[2025-11-25 12:29:23] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 23:50 input.tar.gz
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas 926508408 Nov 25 12:28 HITS.pool.root.1
[2025-11-25 12:29:23] -rw------- 1 boincer umatlas   8273920 Nov 25 12:29 result.tar.gz
12:29:24 (21875): run_atlas exited; CPU time 349389.634785
12:29:24 (21875): called boinc_finish(0)

</stderr_txt>
]]>

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