Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:39 (3822393): wrapper (7.7.26015): starting
00:01:39 (3822393): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:01:39] Arguments: --nthreads 9
[2025-11-25 00:01:39] Threads: 9
[2025-11-25 00:01:39] Checking for CVMFS
[2025-11-25 00:01:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:01:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:01:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:01:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:01:41] 2.13.3.0 11066 28165 345092 153270 0 583 22948931 32935936 21561 16776704 0 78888155 99.439 110834581 38786 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:01:41] CVMFS is ok
[2025-11-25 00:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:01:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:01:41] Further information can be found at the LHC@home message board.
[2025-11-25 00:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:01:41] Checking for apptainer binary...
[2025-11-25 00:01:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:01:41] Running /usr/bin/apptainer --version
[2025-11-25 00:01:41] apptainer version 1.4.4-1.el9
[2025-11-25 00:01:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:01:41] c6-1-24-4.aglt2.org
[2025-11-25 00:01:41] apptainer works
[2025-11-25 00:01:42] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:01:42] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:01:42] Starting ATLAS job with PandaID=6895385145
[2025-11-25 00:01:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:30:10]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:30:10] 2025-11-26 04:28:50,545 | INFO     | time since job start (84402s) is within the limit (172800.0s)
[2025-11-25 23:30:10] 2025-11-26 04:28:51,317 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 23:30:10] 2025-11-26 04:28:51,322 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2855.500321428572
[2025-11-25 23:30:10] 2025-11-26 04:28:51,335 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895385145/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:30:10] 2025-11-26 04:28:51,336 | INFO     | extracted standard info from prmon json
[2025-11-25 23:30:10] 2025-11-26 04:28:51,336 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:30:10] 2025-11-26 04:28:51,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:30:10] 2025-11-26 04:28:51,364 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:30:10] 2025-11-26 04:28:51,366 | INFO     | sum of square deviations: 818379942290.6951
[2025-11-25 23:30:10] 2025-11-26 04:28:51,449 | INFO     | sum of deviations: 5018851328626.453
[2025-11-25 23:30:10] 2025-11-26 04:28:51,449 | INFO     | mean x: 1764089117.8494935
[2025-11-25 23:30:10] 2025-11-26 04:28:51,449 | INFO     | mean y: 3048469.93487699
[2025-11-25 23:30:10] 2025-11-26 04:28:51,449 | INFO     | intersect: -10815521921.896029
[2025-11-25 23:30:10] 2025-11-26 04:28:51,463 | INFO     | chi2: 11.585671429935262
[2025-11-25 23:30:10] 2025-11-26 04:28:51,465 | INFO     | sum of square deviations: 809531187385.8804
[2025-11-25 23:30:10] 2025-11-26 04:28:51,585 | INFO     | sum of deviations: 5518937707210.401
[2025-11-25 23:30:10] 2025-11-26 04:28:51,585 | INFO     | mean x: 1764088965.372549
[2025-11-25 23:30:10] 2025-11-26 04:28:51,585 | INFO     | mean y: 3057086.375453885
[2025-11-25 23:30:10] 2025-11-26 04:28:51,585 | INFO     | intersect: -12023529735.198748
[2025-11-25 23:30:10] 2025-11-26 04:28:51,587 | INFO     | chi2: 8.216531175598577
[2025-11-25 23:30:10] 2025-11-26 04:28:51,587 | INFO     | current chi2=8.216531175598577 (change=29.080233068162464 %)
[2025-11-25 23:30:10] 2025-11-26 04:28:51,597 | INFO     | sum of square deviations: 800746480192.096
[2025-11-25 23:30:10] 2025-11-26 04:28:51,632 | INFO     | monitor loop #4891: job 0:6895385145 is in state 'finished'
[2025-11-25 23:30:10] 2025-11-26 04:28:51,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:30:10] 2025-11-26 04:28:51,693 | INFO     | sum of deviations: 6092563639769.636
[2025-11-25 23:30:10] 2025-11-26 04:28:51,693 | INFO     | mean x: 1764088812.8957727
[2025-11-25 23:30:10] 2025-11-26 04:28:51,693 | INFO     | mean y: 3067043.004373178
[2025-11-25 23:30:10] 2025-11-26 04:28:51,693 | INFO     | intersect: -13419187846.202013
[2025-11-25 23:30:10] 2025-11-26 04:28:51,695 | INFO     | chi2: 4.0538633423630035
[2025-11-25 23:30:10] 2025-11-26 04:28:51,695 | INFO     | current chi2=4.0538633423630035 (change=50.66210721134789 %)
[2025-11-25 23:30:10] 2025-11-26 04:28:51,705 | INFO     | sum of square deviations: 792024836579.2905
[2025-11-25 23:30:10] 2025-11-26 04:28:51,802 | INFO     | sum of deviations: 6317496508105.963
[2025-11-25 23:30:10] 2025-11-26 04:28:51,806 | INFO     | mean x: 1764088660.4125824
[2025-11-25 23:30:10] 2025-11-26 04:28:51,807 | INFO     | mean y: 3070973.9202633505
[2025-11-25 23:30:10] 2025-11-26 04:28:51,807 | INFO     | intersect: -14067982656.517391
[2025-11-25 23:30:10] 2025-11-26 04:28:51,808 | INFO     | chi2: 3.1774109927915366
[2025-11-25 23:30:10] 2025-11-26 04:28:51,808 | INFO     | current chi2=3.1774109927915366 (change=21.620175017063634 %)
[2025-11-25 23:30:10] 2025-11-26 04:28:51,809 | INFO     | right removable region: 1366
[2025-11-25 23:30:10] 2025-11-26 04:28:51,810 | INFO     | sum of square deviations: 809525918827.6271
[2025-11-25 23:30:10] 2025-11-26 04:28:51,912 | INFO     | sum of deviations: 4543097100442.679
[2025-11-25 23:30:10] 2025-11-26 04:28:51,913 | INFO     | mean x: 1764089270.3718228
[2025-11-25 23:30:10] 2025-11-26 04:28:51,913 | INFO     | mean y: 3056662.2135076253
[2025-11-25 23:30:10] 2025-11-26 04:28:51,913 | INFO     | intersect: -9897094355.501823
[2025-11-25 23:30:10] 2025-11-26 04:28:51,914 | INFO     | chi2: 8.937037801482107
[2025-11-25 23:30:10] 2025-11-26 04:28:51,914 | INFO     | current chi2=8.937037801482107 (change=22.861287276018967 %)
[2025-11-25 23:30:10] 2025-11-26 04:28:51,914 | INFO     | left removable region: 10
[2025-11-25 23:30:10] 2025-11-26 04:28:51,923 | INFO     | sum of square deviations: 773052984004.9794
[2025-11-25 23:30:10] 2025-11-26 04:28:52,014 | INFO     | sum of deviations: 5709508882453.595
[2025-11-25 23:30:10] 2025-11-26 04:28:52,014 | INFO     | mean x: 1764088934.9528024
[2025-11-25 23:30:10] 2025-11-26 04:28:52,014 | INFO     | mean y: 3082189.446902655
[2025-11-25 23:30:10] 2025-11-26 04:28:52,014 | INFO     | intersect: -13025884326.367298
[2025-11-25 23:30:10] 2025-11-26 04:28:52,016 | INFO     | chi2: 0.33979084462018855
[2025-11-25 23:30:10] 2025-11-26 04:28:52,016 | INFO     | current memory leak: 7.39 B/s (using 1356 data points, chi2=0.34)
[2025-11-25 23:30:10] 2025-11-26 04:28:52,026 | INFO     | could have reported an average CPU frequency of 2936 MHz (49 samples)
[2025-11-25 23:30:10] 2025-11-26 04:28:52,026 | INFO     | ..............................
[2025-11-25 23:30:10] 2025-11-26 04:28:52,026 | INFO     | . Timing measurements:
[2025-11-25 23:30:10] 2025-11-26 04:28:52,026 | INFO     | . get job = 0 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,026 | INFO     | . initial setup = 2 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,026 | INFO     | . payload setup = 14 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,026 | INFO     | . stage-in = 0 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,027 | INFO     | . payload execution = 84316 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,027 | INFO     | . stage-out = 7 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,027 | INFO     | . log creation = 2 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,027 | INFO     | ..............................
[2025-11-25 23:30:10] 2025-11-26 04:28:52,377 | INFO     | 
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | job summary report
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | --------------------------------------------------
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | PanDA job id: 6895385145
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | task id: 47556149
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | errors: (none)
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | pilot state: finished 
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | transexitcode: 0
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | exeerrorcode: 0
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | exeerrordiag: 
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | exitcode: 0
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | exitmsg: OK
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | cpuconsumptiontime: 235826 s
[2025-11-25 23:30:10] 2025-11-26 04:28:52,378 | INFO     | nevents: 1000
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | neventsw: 0
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | pid: 3853521
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | pgrp: 3853521
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | corecount: 9
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | event service: False
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | sizes: {0: 2284139, 1: 2284338, 11: 2284338, 14: 2284628, 22: 2284656, 84335: 2347847, 84336: 2347974, 84345: 2357029, 84346: 2357085, 84372: 2357331}
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | --------------------------------------------------
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | 
[2025-11-25 23:30:10] 2025-11-26 04:28:52,379 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 23:30:10] 2025-11-26 04:28:52,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:30:10] 2025-11-26 04:28:52,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,424 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:30:10] 2025-11-26 04:28:52,424 | INFO     | job 6895385145 has completed (purged errors)
[2025-11-25 23:30:10] 2025-11-26 04:28:52,424 | INFO     | overall cleanup function is called
[2025-11-25 23:30:10] 2025-11-26 04:28:53,459 | INFO     | --- collectZombieJob: --- 10, [3853521]
[2025-11-25 23:30:10] 2025-11-26 04:28:53,460 | INFO     | zombie collector waiting for pid 3853521
[2025-11-25 23:30:10] 2025-11-26 04:28:53,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:30:10] 2025-11-26 04:28:53,460 | INFO     | collected zombie processes
[2025-11-25 23:30:10] 2025-11-26 04:28:53,460 | INFO     | will attempt to kill all subprocesses of pid=3853521
[2025-11-25 23:30:10] 2025-11-26 04:28:54,613 | INFO     | process IDs to be killed: [3853521] (in reverse order)
[2025-11-25 23:30:10] 2025-11-26 04:28:54,778 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:30:10] 2025-11-26 04:28:54,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:30:10] 2025-11-26 04:28:54,796 | INFO     | did not find any defunct processes belonging to 3853521
[2025-11-25 23:30:10] 2025-11-26 04:28:54,811 | INFO     | did not find any defunct processes belonging to 3853521
[2025-11-25 23:30:10] 2025-11-26 04:28:54,816 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:30:10] 2025-11-26 04:28:54,816 | INFO     | ready for new job
[2025-11-25 23:30:10] 2025-11-26 04:28:54,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:30:10] 2025-11-26 04:28:54,830 | INFO     | ***************************************
[2025-11-25 23:30:10] 2025-11-26 04:28:54,830 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:30:10] 2025-11-26 04:28:54,830 | INFO     | ***************************************
[2025-11-25 23:30:10] 2025-11-26 04:28:54,830 | INFO     | 
[2025-11-25 23:30:10] 2025-11-26 04:28:54,841 | INFO     | architecture information:
[2025-11-25 23:30:10] 2025-11-26 04:28:54,850 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:30:10] 2025-11-26 04:28:54,901 | INFO     | cat /etc/os-release:
[2025-11-25 23:30:10] NAME="CentOS Linux"
[2025-11-25 23:30:10] VERSION="7 (Core)"
[2025-11-25 23:30:10] ID="centos"
[2025-11-25 23:30:10] ID_LIKE="rhel fedora"
[2025-11-25 23:30:10] VERSION_ID="7"
[2025-11-25 23:30:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:30:10] ANSI_COLOR="0;31"
[2025-11-25 23:30:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:30:10] HOME_URL="https://www.centos.org/"
[2025-11-25 23:30:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:30:10] 
[2025-11-25 23:30:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:30:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:30:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:30:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:30:10] 
[2025-11-25 23:30:10] 2025-11-26 04:28:54,902 | INFO     | ***************************************
[2025-11-25 23:30:10] 2025-11-26 04:28:55,405 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 23:30:10] 2025-11-26 04:28:55,453 | INFO     | sufficient remaining disk space (68098719744 B)
[2025-11-25 23:30:10] 2025-11-26 04:28:55,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:30:10] 2025-11-26 04:28:55,453 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:30:10] 2025-11-26 04:28:55,453 | INFO     | update_server=False
[2025-11-25 23:30:10] 2025-11-26 04:28:55,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:30:10] 2025-11-26 04:28:55,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:30:10] 2025-11-26 04:28:55,454 | INFO     | aborting loop
[2025-11-25 23:30:10] 2025-11-26 04:28:55,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:30:10] 2025-11-26 04:28:55,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:30:10] 2025-11-26 04:28:55,878 | INFO     | all data control threads have been joined
[2025-11-25 23:30:10] 2025-11-26 04:28:56,285 | INFO     | all payload control threads have been joined
[2025-11-25 23:30:10] 2025-11-26 04:28:56,459 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:56,460 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:56,471 | INFO     | all job control threads have been joined
[2025-11-25 23:30:10] 2025-11-26 04:28:56,674 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:56,691 | INFO     | [job] validate thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:56,884 | INFO     | [data] control thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:56,958 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,172 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,213 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,291 | INFO     | [payload] control thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:30:10] 2025-11-26 04:28:57,404 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,409 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,477 | INFO     | [job] control thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:57,511 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:58,345 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:28:59,464 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:30:10] 2025-11-26 04:29:24,341 | INFO     | PID=3833020 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:30:10] 2025-11-26 04:29:24,342 | INFO     | .. there are 33 such processes running
[2025-11-25 23:30:10] 2025-11-26 04:29:24,342 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:30:10] 2025-11-26 04:29:24,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:30:10] 2025-11-26 04:29:24,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:30:10] 2025-11-26 04:29:43,976 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:30:10] 2025-11-26 04:29:45,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176728061760)>', '<ExcThread(monitor, started 140176223352576)>']
[2025-11-25 23:30:10] 2025-11-26 04:29:45,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:30:10] 2025-11-26 04:29:45,521 | INFO     | [monitor] control thread has ended
[2025-11-25 23:30:10] 2025-11-26 04:29:50,155 | INFO     | all workflow threads have been joined
[2025-11-25 23:30:10] 2025-11-26 04:29:50,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:30:10] 2025-11-26 04:29:50,194 | INFO     | traces error code: 0
[2025-11-25 23:30:10] 2025-11-26 04:29:50,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:30:10] 2025-11-26 04:29:50,935 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:30:10] 2025-11-26 04:29:50,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:30:10] 2025-11-26 04:29:50,985 [wrapper] pilotpid: 3833020
[2025-11-25 23:30:10] 2025-11-26 04:29:51,043 [wrapper] Pilot exit status: 0
[2025-11-25 23:30:10] 2025-11-26 04:29:51,185 [wrapper] pandaids: 6895385145
[2025-11-25 23:30:10] 2025-11-26 04:29:51,386 [wrapper] cleanup supervisor_pilot   84187 3833023
[2025-11-25 23:30:10] 2025-11-26 04:29:51,418 [wrapper] Test setup, not cleaning
[2025-11-25 23:30:10] 2025-11-26 04:29:51,476 [wrapper] apfmon messages muted
[2025-11-25 23:30:10] 2025-11-26 04:29:51,479 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:30:10] 2025-11-26 04:29:51,482 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:30:10]  *** Error codes and diagnostics ***
[2025-11-25 23:30:10]     "exeErrorCode": 0,
[2025-11-25 23:30:10]     "exeErrorDiag": "",
[2025-11-25 23:30:10]     "pilotErrorCode": 0,
[2025-11-25 23:30:10]     "pilotErrorDiag": "",
[2025-11-25 23:30:10]  *** Listing of results directory ***
[2025-11-25 23:30:10] total 1323976
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:07 queuedata.json
[2025-11-25 23:30:10] -rwx------. 1 boincer umatlas     36292 Nov 24 00:08 runpilot2-wrapper.sh
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:30:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:01 run_atlas
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:01 job.xml
[2025-11-25 23:30:10] -rw-r--r--. 2 boincer umatlas 410539520 Nov 25 00:01 EVNT.47483658._001232.pool.root.1
[2025-11-25 23:30:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 23:30:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:01 shared
[2025-11-25 23:30:10] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:01 input.tar.gz
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:01 boinc_lockfile
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:01 pandaJob.out
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas        57 Nov 25 00:01 setup.sh.local
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas    991801 Nov 25 00:02 agis_schedconf.cvmfs.json
[2025-11-25 23:30:10] drwx------. 5 boincer umatlas      4096 Nov 25 00:02 pilot3
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:09 boinc_task_state.xml
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas 915437794 Nov 25 23:27 HITS.47556149._002182.pool.root.1
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas      1067 Nov 25 23:28 memory_monitor_summary.json
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas   2512306 Nov 25 23:28 log.47556149._002182.job.log.tgz.1
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas        95 Nov 25 23:28 pilot_heartbeat.json
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas      8637 Nov 25 23:28 heartbeat.json
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas      6846 Nov 25 23:29 init_data.xml
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas      4824 Nov 25 23:29 pilotlog.txt
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas  10423543 Nov 25 23:29 log.47556149._002182.job.log.1
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas       353 Nov 25 23:29 output.list
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:29 runtime_log
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas  12953600 Nov 25 23:29 result.tar.gz
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 23:29 runtime_log.err
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas       664 Nov 25 23:29 FQTNDmDzdh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgRLKDmqUUsen.diag
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:30 boinc_mmap_file
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas      2144 Nov 25 23:30 stderr.txt
[2025-11-25 23:30:10] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:30 wrapper_checkpoint.txt
[2025-11-25 23:30:10] HITS file was successfully produced:
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas 915437794 Nov 25 23:27 shared/HITS.pool.root.1
[2025-11-25 23:30:10]  *** Contents of shared directory: ***
[2025-11-25 23:30:10] total 1308160
[2025-11-25 23:30:10] -rw-r--r--. 2 boincer umatlas 410539520 Nov 25 00:01 ATLAS.root_0
[2025-11-25 23:30:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 23:30:10] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 00:01 input.tar.gz
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas 915437794 Nov 25 23:27 HITS.pool.root.1
[2025-11-25 23:30:10] -rw-------. 1 boincer umatlas  12953600 Nov 25 23:29 result.tar.gz
23:30:12 (3822393): run_atlas exited; CPU time 237806.255447
23:30:12 (3822393): called boinc_finish(0)

</stderr_txt>
]]>

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