Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
15:03:23 (826143): wrapper (7.7.26015): starting
15:03:23 (826143): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 15:03:23] Arguments: --nthreads 12
[2025-11-25 15:03:23] Threads: 12
[2025-11-25 15:03:23] Checking for CVMFS
[2025-11-25 15:03:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 15:03:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 15:03:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 15:03:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 15:03:23] 2.13.0.0 557766 1470 81228 153284 3 81 4329011 6144001 0 130560 0 891246 99.986 51602 1736 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 15:03:23] CVMFS is ok
[2025-11-25 15:03:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 15:03:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 15:03:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 15:03:23] Further information can be found at the LHC@home message board.
[2025-11-25 15:03:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 15:03:23] Checking for apptainer binary...
[2025-11-25 15:03:23] apptainer is not installed, using version from CVMFS
[2025-11-25 15:03:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 15:03:23] Debian-bookworm-latest-amd64-base
[2025-11-25 15:03:23] apptainer works
[2025-11-25 15:03:23] Set ATHENA_PROC_NUMBER=12
[2025-11-25 15:03:23] Set ATHENA_CORE_NUMBER=12
[2025-11-25 15:03:23] Starting ATLAS job with PandaID=6895384698
[2025-11-25 15:03:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:24:03]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:24:03] 2025-11-25 17:23:27,816 | INFO     | time since job start (11998s) is within the limit (172800.0s)
[2025-11-25 18:24:03] 2025-11-25 17:23:29,821 | INFO     | time since job start (12000s) is within the limit (172800.0s)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,045 | INFO     | monitor loop #915: job 0:6895384698 is in state 'finished'
[2025-11-25 18:24:03] 2025-11-25 17:23:30,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,106 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 18:24:03] 2025-11-25 17:23:30,108 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3659.073875
[2025-11-25 18:24:03] 2025-11-25 17:23:30,109 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895384698/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,109 | INFO     | extracted standard info from prmon json
[2025-11-25 18:24:03] 2025-11-25 17:23:30,109 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:24:03] 2025-11-25 17:23:30,109 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:24:03] 2025-11-25 17:23:30,111 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:24:03] 2025-11-25 17:23:30,111 | INFO     | sum of square deviations: 2370592763.4923997
[2025-11-25 18:24:03] 2025-11-25 17:23:30,112 | INFO     | sum of deviations: 117697961498.13188
[2025-11-25 18:24:03] 2025-11-25 17:23:30,112 | INFO     | mean x: 1764085405.0507615
[2025-11-25 18:24:03] 2025-11-25 17:23:30,112 | INFO     | mean y: 3583989.7868020306
[2025-11-25 18:24:03] 2025-11-25 17:23:30,112 | INFO     | intersect: -87581790976.5983
[2025-11-25 18:24:03] 2025-11-25 17:23:30,112 | INFO     | chi2: 3.9493763489502243
[2025-11-25 18:24:03] 2025-11-25 17:23:30,112 | INFO     | sum of square deviations: 2194629723.479172
[2025-11-25 18:24:03] 2025-11-25 17:23:30,112 | INFO     | sum of deviations: 174152324315.76044
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | mean x: 1764085252.5520833
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | mean y: 3632495.9739583335
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | intersect: -139983329193.4275
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | chi2: 1.8494310722604697
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | current chi2=1.8494310722604697 (change=53.17156662590378 %)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | sum of square deviations: 2027597083.465241
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | sum of deviations: 165147318507.4545
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | mean x: 1764085100.0534759
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | mean y: 3624276.4545454546
[2025-11-25 18:24:03] 2025-11-25 17:23:30,113 | INFO     | intersect: -143680703477.10745
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | chi2: 1.8475471259205505
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | current chi2=1.8475471259205505 (change=0.10186626407311941 %)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | right removable region: 186
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | sum of square deviations: 2194623623.479172
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | sum of deviations: 61091492634.51045
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | mean x: 1764085557.5520833
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | mean y: 3632630.5989583335
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | intersect: -49103019960.23976
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | chi2: 2.1749668348849887
[2025-11-25 18:24:03] 2025-11-25 17:23:30,114 | INFO     | current chi2=2.1749668348849887 (change=44.92885350206971 %)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | sum of square deviations: 2027584883.465241
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | sum of deviations: 50926022376.48133
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | mean x: 1764085710.0534759
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | mean y: 3641895.9518716577
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | intersect: -44304179234.9085
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | chi2: 2.1700859628052185
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | current chi2=2.1700859628052185 (change=0.22441133361135918 %)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | left removable region: 20
[2025-11-25 18:24:03] 2025-11-25 17:23:30,115 | INFO     | sum of square deviations: 1418307092.8975894
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | sum of deviations: 79405224928.91565
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | mean x: 1764085679.560241
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | mean y: 3707538.108433735
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | intersect: -98760249069.61223
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | chi2: 0.012985613120408128
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | current memory leak: 55.99 B/s (using 166 data points, chi2=0.01)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | could have reported an average CPU frequency of 3913 MHz (10 samples)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | ..............................
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | . Timing measurements:
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | . get job = 0 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | . initial setup = 1 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | . payload setup = 2 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | . stage-in = 0 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,116 | INFO     | . payload execution = 11971 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,117 | INFO     | . stage-out = 1 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,117 | INFO     | . log creation = 0 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,117 | INFO     | ..............................
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | 
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | job summary report
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | --------------------------------------------------
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | PanDA job id: 6895384698
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | task id: 47556149
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | errors: (none)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | pilot state: finished 
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | transexitcode: 0
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | exeerrorcode: 0
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | exeerrordiag: 
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | exitcode: 0
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | exitmsg: OK
[2025-11-25 18:24:03] 2025-11-25 17:23:30,299 | INFO     | cpuconsumptiontime: 138170 s
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | nevents: 1000
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | neventsw: 0
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | pid: 836768
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | pgrp: 836768
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | corecount: 12
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | event service: False
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | sizes: {0: 2284322, 2: 2284584, 11: 2284612, 11977: 2315405, 11979: 2324413, 11982: 2324469, 11988: 2324843}
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | --------------------------------------------------
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | 
[2025-11-25 18:24:03] 2025-11-25 17:23:30,300 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-25 18:24:03] 2025-11-25 17:23:30,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | job 6895384698 has completed (purged errors)
[2025-11-25 18:24:03] 2025-11-25 17:23:30,316 | INFO     | overall cleanup function is called
[2025-11-25 18:24:03] 2025-11-25 17:23:31,333 | INFO     | --- collectZombieJob: --- 10, [836768]
[2025-11-25 18:24:03] 2025-11-25 17:23:31,333 | INFO     | zombie collector waiting for pid 836768
[2025-11-25 18:24:03] 2025-11-25 17:23:31,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:24:03] 2025-11-25 17:23:31,333 | INFO     | collected zombie processes
[2025-11-25 18:24:03] 2025-11-25 17:23:31,333 | INFO     | will attempt to kill all subprocesses of pid=836768
[2025-11-25 18:24:03] 2025-11-25 17:23:31,389 | INFO     | process IDs to be killed: [836768] (in reverse order)
[2025-11-25 18:24:03] 2025-11-25 17:23:31,412 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:24:03] 2025-11-25 17:23:31,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:24:03] 2025-11-25 17:23:31,413 | INFO     | did not find any defunct processes belonging to 836768
[2025-11-25 18:24:03] 2025-11-25 17:23:31,415 | INFO     | did not find any defunct processes belonging to 836768
[2025-11-25 18:24:03] 2025-11-25 17:23:31,416 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:24:03] 2025-11-25 17:23:31,416 | INFO     | ready for new job
[2025-11-25 18:24:03] 2025-11-25 17:23:31,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:24:03] 2025-11-25 17:23:31,418 | INFO     | ***************************************
[2025-11-25 18:24:03] 2025-11-25 17:23:31,418 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:24:03] 2025-11-25 17:23:31,418 | INFO     | ***************************************
[2025-11-25 18:24:03] 2025-11-25 17:23:31,418 | INFO     | 
[2025-11-25 18:24:03] 2025-11-25 17:23:31,419 | INFO     | architecture information:
[2025-11-25 18:24:03] 2025-11-25 17:23:31,419 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:24:03] 2025-11-25 17:23:31,428 | INFO     | cat /etc/os-release:
[2025-11-25 18:24:03] NAME="CentOS Linux"
[2025-11-25 18:24:03] VERSION="7 (Core)"
[2025-11-25 18:24:03] ID="centos"
[2025-11-25 18:24:03] ID_LIKE="rhel fedora"
[2025-11-25 18:24:03] VERSION_ID="7"
[2025-11-25 18:24:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:24:03] ANSI_COLOR="0;31"
[2025-11-25 18:24:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:24:03] HOME_URL="https://www.centos.org/"
[2025-11-25 18:24:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:24:03] 
[2025-11-25 18:24:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:24:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:24:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:24:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:24:03] 
[2025-11-25 18:24:03] 2025-11-25 17:23:31,428 | INFO     | ***************************************
[2025-11-25 18:24:03] 2025-11-25 17:23:31,931 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-25 18:24:03] 2025-11-25 17:23:31,946 | INFO     | sufficient remaining disk space (756190019584 B)
[2025-11-25 18:24:03] 2025-11-25 17:23:31,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:24:03] 2025-11-25 17:23:31,947 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:24:03] 2025-11-25 17:23:31,947 | INFO     | update_server=False
[2025-11-25 18:24:03] 2025-11-25 17:23:31,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:24:03] 2025-11-25 17:23:31,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:24:03] 2025-11-25 17:23:31,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:24:03] 2025-11-25 17:23:31,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:24:03] 2025-11-25 17:23:31,948 | INFO     | aborting loop
[2025-11-25 18:24:03] 2025-11-25 17:23:32,812 | INFO     | all data control threads have been joined
[2025-11-25 18:24:03] 2025-11-25 17:23:32,952 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:32,953 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:32,953 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:33,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:33,333 | INFO     | all payload control threads have been joined
[2025-11-25 18:24:03] 2025-11-25 17:23:33,355 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:33,459 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:33,558 | INFO     | all job control threads have been joined
[2025-11-25 18:24:03] 2025-11-25 17:23:33,682 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:33,817 | INFO     | [data] control thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:33,953 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:34,077 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:34,090 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:34,221 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:34,226 | INFO     | [job] validate thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:34,339 | INFO     | [payload] control thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:34,563 | INFO     | [job] control thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:34,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:24:03] 2025-11-25 17:23:38,679 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:24:03] 2025-11-25 17:23:47,024 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:24:03] 2025-11-25 17:23:48,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230577772352)>', '<ExcThread(monitor, started 140230178879232)>']
[2025-11-25 18:24:03] 2025-11-25 17:23:53,766 | INFO     | all workflow threads have been joined
[2025-11-25 18:24:03] 2025-11-25 17:23:53,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:24:03] 2025-11-25 17:23:53,767 | INFO     | traces error code: 0
[2025-11-25 18:24:03] 2025-11-25 17:23:53,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:24:03] 2025-11-25 17:24:02,989 | INFO     | PID=829992 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 18:24:03] 2025-11-25 17:24:03,003 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:24:03] 2025-11-25 17:24:03,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:24:03] 2025-11-25 17:24:03,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:24:03] 2025-11-25 17:24:03,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:24:03] 2025-11-25 17:24:03,003 | INFO     | [monitor] control thread has ended
[2025-11-25 18:24:03] 2025-11-25 17:24:03,073 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:24:03] 2025-11-25 17:24:03,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:24:03] 2025-11-25 17:24:03,078 [wrapper] pilotpid: 829992
[2025-11-25 18:24:03] 2025-11-25 17:24:03,079 [wrapper] Pilot exit status: 0
[2025-11-25 18:24:03] 2025-11-25 17:24:03,087 [wrapper] pandaids: 6895384698
[2025-11-25 18:24:03] 2025-11-25 17:24:03,105 [wrapper] cleanup supervisor_pilot  863022 829993
[2025-11-25 18:24:03] 2025-11-25 17:24:03,107 [wrapper] Test setup, not cleaning
[2025-11-25 18:24:03] 2025-11-25 17:24:03,109 [wrapper] apfmon messages muted
[2025-11-25 18:24:03] 2025-11-25 17:24:03,110 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:24:03] 2025-11-25 17:24:03,111 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:24:03]  *** Error codes and diagnostics ***
[2025-11-25 18:24:03]     "exeErrorCode": 0,
[2025-11-25 18:24:03]     "exeErrorDiag": "",
[2025-11-25 18:24:03]     "pilotErrorCode": 0,
[2025-11-25 18:24:03]     "pilotErrorDiag": "",
[2025-11-25 18:24:03]  *** Listing of results directory ***
[2025-11-25 18:24:03] total 1307000
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc    576529 Nov 24 05:40 pilot3.tar.gz
[2025-11-25 18:24:03] -rwx------ 1 boinc boinc     36292 Nov 24 06:10 runpilot2-wrapper.sh
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc      5112 Nov 24 06:10 queuedata.json
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc       100 Nov 25 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:24:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 15:03 run_atlas
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc       105 Nov 25 15:03 job.xml
[2025-11-25 18:24:03] -rw-r--r-- 2 boinc boinc     15847 Nov 25 15:03 start_atlas.sh
[2025-11-25 18:24:03] drwxrwx--x 2 boinc boinc      4096 Nov 25 15:03 shared
[2025-11-25 18:24:03] -rw-r--r-- 2 boinc boinc    590102 Nov 25 15:03 input.tar.gz
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc      6729 Nov 25 15:03 init_data.xml
[2025-11-25 18:24:03] -rw-r--r-- 2 boinc boinc 409855410 Nov 25 15:03 EVNT.47483658._001229.pool.root.1
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc         0 Nov 25 15:03 boinc_lockfile
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc      2786 Nov 25 15:03 pandaJob.out
[2025-11-25 18:24:03] -rw------- 1 boinc boinc    991909 Nov 25 15:03 agis_schedconf.cvmfs.json
[2025-11-25 18:24:03] drwx------ 5 boinc boinc      4096 Nov 25 15:03 pilot3
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc       532 Nov 25 18:18 boinc_task_state.xml
[2025-11-25 18:24:03] -rw------- 1 boinc boinc 917284862 Nov 25 18:22 HITS.47556149._002152.pool.root.1
[2025-11-25 18:24:03] -rw------- 1 boinc boinc      1045 Nov 25 18:23 memory_monitor_summary.json
[2025-11-25 18:24:03] -rw------- 1 boinc boinc   1516240 Nov 25 18:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:24:03] -rw------- 1 boinc boinc   1930343 Nov 25 18:23 log.47556149._002152.job.log.tgz.1
[2025-11-25 18:24:03] -rw------- 1 boinc boinc      8604 Nov 25 18:23 heartbeat.json
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc        29 Nov 25 18:23 wrapper_checkpoint.txt
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc      8192 Nov 25 18:23 boinc_mmap_file
[2025-11-25 18:24:03] -rw------- 1 boinc boinc        95 Nov 25 18:24 pilot_heartbeat.json
[2025-11-25 18:24:03] -rw------- 1 boinc boinc       746 Nov 25 18:24 pilotlog.txt
[2025-11-25 18:24:03] -rw------- 1 boinc boinc   1722756 Nov 25 18:24 log.47556149._002152.job.log.1
[2025-11-25 18:24:03] -rw------- 1 boinc boinc       353 Nov 25 18:24 output.list
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc       620 Nov 25 18:24 runtime_log
[2025-11-25 18:24:03] -rw------- 1 boinc boinc   3676160 Nov 25 18:24 result.tar.gz
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc      9133 Nov 25 18:24 runtime_log.err
[2025-11-25 18:24:03] -rw------- 1 boinc boinc       713 Nov 25 18:24 nYCLDmq1dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBSLKDmZ3BVEn.diag
[2025-11-25 18:24:03] -rw-r--r-- 1 boinc boinc     21457 Nov 25 18:24 stderr.txt
[2025-11-25 18:24:03] HITS file was successfully produced:
[2025-11-25 18:24:03] -rw------- 1 boinc boinc 917284862 Nov 25 18:22 shared/HITS.pool.root.1
[2025-11-25 18:24:03]  *** Contents of shared directory: ***
[2025-11-25 18:24:03] total 1300236
[2025-11-25 18:24:03] -rw-r--r-- 2 boinc boinc     15847 Nov 25 15:03 start_atlas.sh
[2025-11-25 18:24:03] -rw-r--r-- 2 boinc boinc    590102 Nov 25 15:03 input.tar.gz
[2025-11-25 18:24:03] -rw-r--r-- 2 boinc boinc 409855410 Nov 25 15:03 ATLAS.root_0
[2025-11-25 18:24:03] -rw------- 1 boinc boinc 917284862 Nov 25 18:22 HITS.pool.root.1
[2025-11-25 18:24:03] -rw------- 1 boinc boinc   3676160 Nov 25 18:24 result.tar.gz
18:24:05 (826143): run_atlas exited; CPU time 138009.787494
18:24:05 (826143): called boinc_finish(0)

</stderr_txt>
]]>

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