Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:28 (2865741): wrapper (7.7.26015): starting
00:01:28 (2865741): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:01:28] Arguments: --nthreads 8
[2025-11-25 00:01:28] Threads: 8
[2025-11-25 00:01:28] Checking for CVMFS
[2025-11-25 00:01:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:01:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:01:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:01:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:01:32] 2.13.2.0 6529 31880 475476 153270 2 571 32658045 40960000 17847 16776704 0 66682602 99.573 77750089 40121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:01:32] CVMFS is ok
[2025-11-25 00:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:01:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:01:32] Further information can be found at the LHC@home message board.
[2025-11-25 00:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:01:32] Checking for apptainer binary...
[2025-11-25 00:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:01:32] Running /usr/bin/apptainer --version
[2025-11-25 00:01:32] apptainer version 1.4.4-1.el9
[2025-11-25 00:01:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:01:33] c-206-36.aglt2.org
[2025-11-25 00:01:33] apptainer works
[2025-11-25 00:01:33] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:01:33] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:01:33] Starting ATLAS job with PandaID=6895366961
[2025-11-25 00:01:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:00:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:00:55] 2025-11-26 16:59:55,434 | INFO     | monitor loop #8444: job 0:6895366961 is in state 'finished'
[2025-11-26 12:00:55] 2025-11-26 16:59:55,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:00:55] 2025-11-26 16:59:57,321 | INFO     | time since job start (129414s) is within the limit (172800.0s)
[2025-11-26 12:00:55] 2025-11-26 16:59:57,942 | INFO     | monitor loop #8445: job 0:6895366961 is in state 'finished'
[2025-11-26 12:00:55] 2025-11-26 16:59:57,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:00:55] 2025-11-26 16:59:58,838 | INFO     | PID=2869542 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 12:00:55] 2025-11-26 16:59:58,838 | INFO     | .. there are 23 such processes running
[2025-11-26 12:00:55] 2025-11-26 16:59:59,839 | INFO     | time since job start (129416s) is within the limit (172800.0s)
[2025-11-26 12:00:55] 2025-11-26 17:00:00,448 | INFO     | monitor loop #8446: job 0:6895366961 is in state 'finished'
[2025-11-26 12:00:55] 2025-11-26 17:00:00,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:00:55] 2025-11-26 17:00:01,845 | INFO     | time since job start (129418s) is within the limit (172800.0s)
[2025-11-26 12:00:55] 2025-11-26 17:00:02,957 | INFO     | monitor loop #8447: job 0:6895366961 is in state 'finished'
[2025-11-26 12:00:55] 2025-11-26 17:00:02,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:00:55] 2025-11-26 17:00:03,853 | INFO     | time since job start (129420s) is within the limit (172800.0s)
[2025-11-26 12:00:55] 2025-11-26 17:00:05,473 | INFO     | monitor loop #8448: job 0:6895366961 is in state 'finished'
[2025-11-26 12:00:55] 2025-11-26 17:00:05,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:00:55] 2025-11-26 17:00:05,805 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 12:00:55] 2025-11-26 17:00:05,810 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3227.88153125
[2025-11-26 12:00:55] 2025-11-26 17:00:05,820 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895366961/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:00:55] 2025-11-26 17:00:05,821 | INFO     | extracted standard info from prmon json
[2025-11-26 12:00:55] 2025-11-26 17:00:05,821 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:00:55] 2025-11-26 17:00:05,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:00:55] 2025-11-26 17:00:05,850 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:00:55] 2025-11-26 17:00:05,852 | INFO     | sum of square deviations: 2950422121895.297
[2025-11-26 12:00:55] 2025-11-26 17:00:05,863 | INFO     | time since job start (129422s) is within the limit (172800.0s)
[2025-11-26 12:00:55] 2025-11-26 17:00:05,946 | INFO     | sum of deviations: 6195258291625.192
[2025-11-26 12:00:55] 2025-11-26 17:00:05,946 | INFO     | mean x: 1764111735.7852762
[2025-11-26 12:00:55] 2025-11-26 17:00:05,946 | INFO     | mean y: 2881561.3147711186
[2025-11-26 12:00:55] 2025-11-26 17:00:05,946 | INFO     | intersect: -3701377492.7952127
[2025-11-26 12:00:55] 2025-11-26 17:00:05,950 | INFO     | chi2: 31.521676866929578
[2025-11-26 12:00:55] 2025-11-26 17:00:05,952 | INFO     | sum of square deviations: 2929587657126.825
[2025-11-26 12:00:55] 2025-11-26 17:00:06,056 | INFO     | sum of deviations: 6966623578695.758
[2025-11-26 12:00:55] 2025-11-26 17:00:06,057 | INFO     | mean x: 1764111583.2894986
[2025-11-26 12:00:55] 2025-11-26 17:00:06,057 | INFO     | mean y: 2887206.40397351
[2025-11-26 12:00:55] 2025-11-26 17:00:06,057 | INFO     | intersect: -4192208755.8886075
[2025-11-26 12:00:55] 2025-11-26 17:00:06,058 | INFO     | chi2: 27.667013056127846
[2025-11-26 12:00:55] 2025-11-26 17:00:06,058 | INFO     | current chi2=27.667013056127846 (change=12.228612795805244 %)
[2025-11-26 12:00:55] 2025-11-26 17:00:06,059 | INFO     | right removable region: 2113
[2025-11-26 12:00:55] 2025-11-26 17:00:06,060 | INFO     | sum of square deviations: 2929585349496.828
[2025-11-26 12:00:55] 2025-11-26 17:00:06,143 | INFO     | sum of deviations: 5292562714590.644
[2025-11-26 12:00:55] 2025-11-26 17:00:06,143 | INFO     | mean x: 1764111888.2894986
[2025-11-26 12:00:55] 2025-11-26 17:00:06,143 | INFO     | mean y: 2888167.8519394514
[2025-11-26 12:00:55] 2025-11-26 17:00:06,143 | INFO     | intersect: -3184140606.008743
[2025-11-26 12:00:55] 2025-11-26 17:00:06,145 | INFO     | chi2: 26.94485272742865
[2025-11-26 12:00:55] 2025-11-26 17:00:06,145 | INFO     | current chi2=26.94485272742865 (change=14.51960870870618 %)
[2025-11-26 12:00:55] 2025-11-26 17:00:06,145 | INFO     | left removable region: 10
[2025-11-26 12:00:55] 2025-11-26 17:00:06,147 | INFO     | sum of square deviations: 2884093004463.9155
[2025-11-26 12:00:55] 2025-11-26 17:00:06,234 | INFO     | sum of deviations: 5529807216946.007
[2025-11-26 12:00:55] 2025-11-26 17:00:06,234 | INFO     | mean x: 1764111857.798859
[2025-11-26 12:00:55] 2025-11-26 17:00:06,234 | INFO     | mean y: 2900036.496433666
[2025-11-26 12:00:55] 2025-11-26 17:00:06,234 | INFO     | intersect: -3379514631.7050924
[2025-11-26 12:00:55] 2025-11-26 17:00:06,236 | INFO     | chi2: 19.742415190020054
[2025-11-26 12:00:55] 2025-11-26 17:00:06,236 | INFO     | current memory leak: 1.92 B/s (using 2103 data points, chi2=19.74)
[2025-11-26 12:00:55] 2025-11-26 17:00:06,237 | INFO     | could have reported an average CPU frequency of 3214 MHz (74 samples)
[2025-11-26 12:00:55] 2025-11-26 17:00:06,237 | INFO     | ..............................
[2025-11-26 12:00:55] 2025-11-26 17:00:06,237 | INFO     | . Timing measurements:
[2025-11-26 12:00:55] 2025-11-26 17:00:06,237 | INFO     | . get job = 0 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,237 | INFO     | . initial setup = 10 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,238 | INFO     | . payload setup = 47 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,238 | INFO     | . stage-in = 0 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,238 | INFO     | . payload execution = 129260 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,238 | INFO     | . stage-out = 6 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,238 | INFO     | . log creation = 1 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,238 | INFO     | ..............................
[2025-11-26 12:00:55] 2025-11-26 17:00:06,361 | INFO     | 
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | job summary report
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | --------------------------------------------------
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | PanDA job id: 6895366961
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | task id: 47556137
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | errors: (none)
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | pilot state: finished 
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | transexitcode: 0
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | exeerrorcode: 0
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | exeerrordiag: 
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | exitcode: 0
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | exitmsg: OK
[2025-11-26 12:00:55] 2025-11-26 17:00:06,362 | INFO     | cpuconsumptiontime: 204748 s
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | nevents: 1000
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | neventsw: 0
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | pid: 2880575
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | pgrp: 2880575
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | corecount: 8
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | event service: False
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | sizes: {0: 2284088, 1: 2284287, 11: 2284287, 22: 2284315, 33: 2284343, 34: 2284661, 44: 2284817, 129313: 2370864, 129319: 2379891, 129320: 2379947, 129343: 2380193
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | --------------------------------------------------
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | 
[2025-11-26 12:00:55] 2025-11-26 17:00:06,363 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:00:55] 2025-11-26 17:00:06,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:00:55] 2025-11-26 17:00:06,452 | INFO     | job 6895366961 has completed (purged errors)
[2025-11-26 12:00:55] 2025-11-26 17:00:06,452 | INFO     | overall cleanup function is called
[2025-11-26 12:00:55] 2025-11-26 17:00:07,474 | INFO     | --- collectZombieJob: --- 10, [2880575]
[2025-11-26 12:00:55] 2025-11-26 17:00:07,474 | INFO     | zombie collector waiting for pid 2880575
[2025-11-26 12:00:55] 2025-11-26 17:00:07,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:00:55] 2025-11-26 17:00:07,474 | INFO     | collected zombie processes
[2025-11-26 12:00:55] 2025-11-26 17:00:07,474 | INFO     | will attempt to kill all subprocesses of pid=2880575
[2025-11-26 12:00:55] 2025-11-26 17:00:07,878 | INFO     | process IDs to be killed: [2880575] (in reverse order)
[2025-11-26 12:00:55] 2025-11-26 17:00:08,002 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:00:55] 2025-11-26 17:00:08,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:00:55] 2025-11-26 17:00:08,018 | INFO     | did not find any defunct processes belonging to 2880575
[2025-11-26 12:00:55] 2025-11-26 17:00:08,030 | INFO     | did not find any defunct processes belonging to 2880575
[2025-11-26 12:00:55] 2025-11-26 17:00:08,031 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:00:55] 2025-11-26 17:00:08,031 | INFO     | ready for new job
[2025-11-26 12:00:55] 2025-11-26 17:00:08,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:00:55] 2025-11-26 17:00:08,039 | INFO     | ***************************************
[2025-11-26 12:00:55] 2025-11-26 17:00:08,040 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:00:55] 2025-11-26 17:00:08,040 | INFO     | ***************************************
[2025-11-26 12:00:55] 2025-11-26 17:00:08,040 | INFO     | 
[2025-11-26 12:00:55] 2025-11-26 17:00:08,043 | INFO     | architecture information:
[2025-11-26 12:00:55] 2025-11-26 17:00:08,044 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:00:55] 2025-11-26 17:00:08,066 | INFO     | cat /etc/os-release:
[2025-11-26 12:00:55] NAME="CentOS Linux"
[2025-11-26 12:00:55] VERSION="7 (Core)"
[2025-11-26 12:00:55] ID="centos"
[2025-11-26 12:00:55] ID_LIKE="rhel fedora"
[2025-11-26 12:00:55] VERSION_ID="7"
[2025-11-26 12:00:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:00:55] ANSI_COLOR="0;31"
[2025-11-26 12:00:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:00:55] HOME_URL="https://www.centos.org/"
[2025-11-26 12:00:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:00:55] 
[2025-11-26 12:00:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:00:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:00:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:00:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:00:55] 
[2025-11-26 12:00:55] 2025-11-26 17:00:08,066 | INFO     | ***************************************
[2025-11-26 12:00:55] 2025-11-26 17:00:08,569 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 12:00:55] 2025-11-26 17:00:08,618 | INFO     | sufficient remaining disk space (76377227264 B)
[2025-11-26 12:00:55] 2025-11-26 17:00:08,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:00:55] 2025-11-26 17:00:08,618 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:00:55] 2025-11-26 17:00:08,618 | INFO     | update_server=False
[2025-11-26 12:00:55] 2025-11-26 17:00:08,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:00:55] 2025-11-26 17:00:08,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:00:55] 2025-11-26 17:00:08,983 | INFO     | all payload control threads have been joined
[2025-11-26 12:00:55] 2025-11-26 17:00:08,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:00:55] 2025-11-26 17:00:08,987 | INFO     | aborting loop
[2025-11-26 12:00:55] 2025-11-26 17:00:09,470 | INFO     | all data control threads have been joined
[2025-11-26 12:00:55] 2025-11-26 17:00:09,625 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:09,755 | INFO     | all job control threads have been joined
[2025-11-26 12:00:55] 2025-11-26 17:00:09,872 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:09,896 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:09,989 | INFO     | [payload] control thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:09,992 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,007 | INFO     | [job] validate thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,071 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,310 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,475 | INFO     | [data] control thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,543 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,616 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,627 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,760 | INFO     | [job] control thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:10,766 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:11,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:00:55] 2025-11-26 17:00:11,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:00:55] 2025-11-26 17:00:12,380 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:15,396 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:00:55] 2025-11-26 17:00:39,461 | INFO     | PID=2869542 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 12:00:55] 2025-11-26 17:00:39,461 | INFO     | .. there are 23 such processes running
[2025-11-26 12:00:55] 2025-11-26 17:00:39,461 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:00:55] 2025-11-26 17:00:39,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:00:55] 2025-11-26 17:00:39,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:00:55] 2025-11-26 17:00:48,411 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:00:55] 2025-11-26 17:00:49,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807845877568)>', '<ExcThread(monitor, started 139807183316736)>']
[2025-11-26 12:00:55] 2025-11-26 17:00:49,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:00:55] 2025-11-26 17:00:49,561 | INFO     | [monitor] control thread has ended
[2025-11-26 12:00:55] 2025-11-26 17:00:54,415 | INFO     | all workflow threads have been joined
[2025-11-26 12:00:55] 2025-11-26 17:00:54,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:00:55] 2025-11-26 17:00:54,415 | INFO     | traces error code: 0
[2025-11-26 12:00:55] 2025-11-26 17:00:54,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:00:55] 2025-11-26 17:00:54,643 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:00:55] 2025-11-26 17:00:54,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:00:55] 2025-11-26 17:00:54,685 [wrapper] pilotpid: 2869542
[2025-11-26 12:00:55] 2025-11-26 17:00:54,691 [wrapper] Pilot exit status: 0
[2025-11-26 12:00:55] 2025-11-26 17:00:54,710 [wrapper] pandaids: 6895366961
[2025-11-26 12:00:55] 2025-11-26 17:00:54,807 [wrapper] cleanup supervisor_pilot 4106037 2869543
[2025-11-26 12:00:55] 2025-11-26 17:00:54,830 [wrapper] Test setup, not cleaning
[2025-11-26 12:00:55] 2025-11-26 17:00:54,897 [wrapper] apfmon messages muted
[2025-11-26 12:00:55] 2025-11-26 17:00:54,947 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:00:55] 2025-11-26 17:00:55,000 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:00:55]  *** Error codes and diagnostics ***
[2025-11-26 12:00:55]     "exeErrorCode": 0,
[2025-11-26 12:00:55]     "exeErrorDiag": "",
[2025-11-26 12:00:55]     "pilotErrorCode": 0,
[2025-11-26 12:00:55]     "pilotErrorDiag": "",
[2025-11-26 12:00:55]  *** Listing of results directory ***
[2025-11-26 12:00:55] total 1349620
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 13:58 queuedata.json
[2025-11-26 12:00:55] -rwx------. 1 boincer umatlas     36292 Nov 23 13:59 runpilot2-wrapper.sh
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:00:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:01 run_atlas
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:01 job.xml
[2025-11-26 12:00:55] -rw-r--r--. 2 boincer umatlas 409823627 Nov 25 00:01 EVNT.47483658._000854.pool.root.1
[2025-11-26 12:00:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-26 12:00:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:01 shared
[2025-11-26 12:00:55] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 00:01 input.tar.gz
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:01 boinc_lockfile
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:01 pandaJob.out
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas        57 Nov 25 00:01 setup.sh.local
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas    991801 Nov 25 00:02 agis_schedconf.cvmfs.json
[2025-11-26 12:00:55] drwx------. 5 boincer umatlas      4096 Nov 25 00:03 pilot3
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas       534 Nov 26 11:02 boinc_task_state.xml
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas      6903 Nov 26 11:55 init_data.xml
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas 927983502 Nov 26 11:56 HITS.47556137._008404.pool.root.1
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas      1060 Nov 26 11:59 memory_monitor_summary.json
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas   1516240 Nov 26 11:59 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas   3000710 Nov 26 11:59 log.47556137._008404.job.log.tgz.1
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas        95 Nov 26 11:59 pilot_heartbeat.json
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas      8604 Nov 26 12:00 heartbeat.json
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 12:00 boinc_mmap_file
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas        30 Nov 26 12:00 wrapper_checkpoint.txt
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas      4824 Nov 26 12:00 pilotlog.txt
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas  17139849 Nov 26 12:00 log.47556137._008404.job.log.1
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas       353 Nov 26 12:00 output.list
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas       620 Nov 26 12:00 runtime_log
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas  20162560 Nov 26 12:00 result.tar.gz
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas       667 Nov 26 12:00 YGGNDmbUUh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma7KKDmBdjfGo.diag
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas      9344 Nov 26 12:00 runtime_log.err
[2025-11-26 12:00:55] -rw-r--r--. 1 boincer umatlas     20576 Nov 26 12:00 stderr.txt
[2025-11-26 12:00:55] HITS file was successfully produced:
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas 927983502 Nov 26 11:56 shared/HITS.pool.root.1
[2025-11-26 12:00:55]  *** Contents of shared directory: ***
[2025-11-26 12:00:55] total 1326748
[2025-11-26 12:00:55] -rw-r--r--. 2 boincer umatlas 409823627 Nov 25 00:01 ATLAS.root_0
[2025-11-26 12:00:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-26 12:00:55] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 00:01 input.tar.gz
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas 927983502 Nov 26 11:56 HITS.pool.root.1
[2025-11-26 12:00:55] -rw-------. 1 boincer umatlas  20162560 Nov 26 12:00 result.tar.gz
12:00:57 (2865741): run_atlas exited; CPU time 205437.121634
12:00:57 (2865741): called boinc_finish(0)

</stderr_txt>
]]>

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