Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:39:47 (255981): wrapper (7.7.26015): starting
13:39:47 (255981): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 13:39:47] Arguments: --nthreads 3
[2025-11-27 13:39:47] Threads: 3
[2025-11-27 13:39:47] Checking for CVMFS
[2025-11-27 13:39:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 13:39:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 13:39:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 13:39:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 13:39:48] 2.9.2.0 2771396 12551 102592 153364 0 81 19327589 36864000 0 130560 1 4643267 99.936 623143 810 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 13:39:48] CVMFS is ok
[2025-11-27 13:39:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 13:39:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 13:39:48] Further information can be found at the LHC@home message board.
[2025-11-27 13:39:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 13:39:48] Checking for apptainer binary...
[2025-11-27 13:39:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 13:39:48] Running /usr/bin/apptainer --version
[2025-11-27 13:39:48] apptainer version 1.4.1-1.1
[2025-11-27 13:39:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 13:39:48] atlasA217a
[2025-11-27 13:39:48] apptainer works
[2025-11-27 13:39:48] Set ATHENA_PROC_NUMBER=3
[2025-11-27 13:39:48] Set ATHENA_CORE_NUMBER=3
[2025-11-27 13:39:48] Starting ATLAS job with PandaID=6895384329
[2025-11-27 13:39:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:52:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:52:31] 2025-11-27 20:51:39,680 | INFO     | time since job start (29506s) is within the limit (172800.0s)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,675 | INFO     | monitor loop #2248: job 0:6895384329 is in state 'finished'
[2025-11-27 21:52:31] 2025-11-27 20:51:40,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,679 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 21:52:31] 2025-11-27 20:51:40,680 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3460.5165
[2025-11-27 21:52:31] 2025-11-27 20:51:40,681 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895384329/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,682 | INFO     | extracted standard info from prmon json
[2025-11-27 21:52:31] 2025-11-27 20:51:40,682 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:52:31] 2025-11-27 20:51:40,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:52:31] 2025-11-27 20:51:40,684 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:52:31] 2025-11-27 20:51:40,685 | INFO     | sum of square deviations: 35157068485.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,686 | INFO     | sum of deviations: 182099676142.5
[2025-11-27 21:52:31] 2025-11-27 20:51:40,687 | INFO     | mean x: 1764261944.5
[2025-11-27 21:52:31] 2025-11-27 20:51:40,687 | INFO     | mean y: 2203098.6012396696
[2025-11-27 21:52:31] 2025-11-27 20:51:40,687 | INFO     | intersect: -9135974302.65336
[2025-11-27 21:52:31] 2025-11-27 20:51:40,687 | INFO     | chi2: 3.69503144179384
[2025-11-27 21:52:31] 2025-11-27 20:51:40,687 | INFO     | sum of square deviations: 34078704080.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,689 | INFO     | sum of deviations: 247023054592.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,689 | INFO     | mean x: 1764261792.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,689 | INFO     | mean y: 2212245.9394572023
[2025-11-27 21:52:31] 2025-11-27 20:51:40,689 | INFO     | intersect: -12786224073.021523
[2025-11-27 21:52:31] 2025-11-27 20:51:40,689 | INFO     | chi2: 2.3439818229150213
[2025-11-27 21:52:31] 2025-11-27 20:51:40,689 | INFO     | current chi2=2.3439818229150213 (change=36.56395460123392 %)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,689 | INFO     | sum of square deviations: 33022619162.5
[2025-11-27 21:52:31] 2025-11-27 20:51:40,691 | INFO     | sum of deviations: 243094825026.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,691 | INFO     | mean x: 1764261639.5
[2025-11-27 21:52:31] 2025-11-27 20:51:40,691 | INFO     | mean y: 2211678.7383966246
[2025-11-27 21:52:31] 2025-11-27 20:51:40,691 | INFO     | intersect: -12985337020.65034
[2025-11-27 21:52:31] 2025-11-27 20:51:40,691 | INFO     | chi2: 2.3432109863307637
[2025-11-27 21:52:31] 2025-11-27 20:51:40,691 | INFO     | current chi2=2.3432109863307637 (change=0.032885774826485484 %)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,691 | INFO     | right removable region: 473
[2025-11-27 21:52:31] 2025-11-27 20:51:40,692 | INFO     | sum of square deviations: 34078704080.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,693 | INFO     | sum of deviations: 82116609852.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,693 | INFO     | mean x: 1764262097.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,694 | INFO     | mean y: 2217217.4363256786
[2025-11-27 21:52:31] 2025-11-27 20:51:40,694 | INFO     | intersect: -4248977955.828619
[2025-11-27 21:52:31] 2025-11-27 20:51:40,694 | INFO     | chi2: 1.6425723939896235
[2025-11-27 21:52:31] 2025-11-27 20:51:40,694 | INFO     | current chi2=1.6425723939896235 (change=55.54645691479696 %)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,694 | INFO     | sum of square deviations: 33022619162.5
[2025-11-27 21:52:31] 2025-11-27 20:51:40,696 | INFO     | sum of deviations: 56328707748.50003
[2025-11-27 21:52:31] 2025-11-27 20:51:40,696 | INFO     | mean x: 1764262249.5
[2025-11-27 21:52:31] 2025-11-27 20:51:40,696 | INFO     | mean y: 2220924.1033755275
[2025-11-27 21:52:31] 2025-11-27 20:51:40,696 | INFO     | intersect: -3007189448.670739
[2025-11-27 21:52:31] 2025-11-27 20:51:40,696 | INFO     | chi2: 1.410269652514045
[2025-11-27 21:52:31] 2025-11-27 20:51:40,696 | INFO     | current chi2=1.410269652514045 (change=14.142618147340299 %)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,696 | INFO     | left removable region: 20
[2025-11-27 21:52:31] 2025-11-27 20:51:40,697 | INFO     | sum of square deviations: 28825106042.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,698 | INFO     | sum of deviations: 102451876499.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,698 | INFO     | mean x: 1764262219.0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,698 | INFO     | mean y: 2232447.766004415
[2025-11-27 21:52:31] 2025-11-27 20:51:40,698 | INFO     | intersect: -6268411438.486232
[2025-11-27 21:52:31] 2025-11-27 20:51:40,698 | INFO     | chi2: 0.03927560037413528
[2025-11-27 21:52:31] 2025-11-27 20:51:40,698 | INFO     | current memory leak: 3.55 B/s (using 453 data points, chi2=0.04)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | could have reported an average CPU frequency of 3826 MHz (20 samples)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | ..............................
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . Timing measurements:
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . get job = 0 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . initial setup = 1 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . payload setup = 2 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . stage-in = 0 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . payload execution = 29483 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . stage-out = 1 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | . log creation = 0 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,699 | INFO     | ..............................
[2025-11-27 21:52:31] 2025-11-27 20:51:40,910 | INFO     | 
[2025-11-27 21:52:31] 2025-11-27 20:51:40,910 | INFO     | job summary report
[2025-11-27 21:52:31] 2025-11-27 20:51:40,910 | INFO     | --------------------------------------------------
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | PanDA job id: 6895384329
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | task id: 47556149
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | errors: (none)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | pilot state: finished 
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | transexitcode: 0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | exeerrorcode: 0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | exeerrordiag: 
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | exitcode: 0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | exitmsg: OK
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | cpuconsumptiontime: 87164 s
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | nevents: 1000
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | neventsw: 0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | pid: 266152
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | pgrp: 266152
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | corecount: 3
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | event service: False
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | sizes: {0: 2284267, 2: 2284529, 10: 2284557, 29489: 2323717, 29490: 2332717, 29491: 2332773, 29494: 2333147}
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | --------------------------------------------------
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | 
[2025-11-27 21:52:31] 2025-11-27 20:51:40,911 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 21:52:31] 2025-11-27 20:51:40,926 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | job 6895384329 has completed (purged errors)
[2025-11-27 21:52:31] 2025-11-27 20:51:40,927 | INFO     | overall cleanup function is called
[2025-11-27 21:52:31] 2025-11-27 20:51:41,936 | INFO     | --- collectZombieJob: --- 10, [266152]
[2025-11-27 21:52:31] 2025-11-27 20:51:41,936 | INFO     | zombie collector waiting for pid 266152
[2025-11-27 21:52:31] 2025-11-27 20:51:41,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:52:31] 2025-11-27 20:51:41,936 | INFO     | collected zombie processes
[2025-11-27 21:52:31] 2025-11-27 20:51:41,936 | INFO     | will attempt to kill all subprocesses of pid=266152
[2025-11-27 21:52:31] 2025-11-27 20:51:41,979 | INFO     | process IDs to be killed: [266152] (in reverse order)
[2025-11-27 21:52:31] 2025-11-27 20:51:42,002 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:52:31] 2025-11-27 20:51:42,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:52:31] 2025-11-27 20:51:42,004 | INFO     | did not find any defunct processes belonging to 266152
[2025-11-27 21:52:31] 2025-11-27 20:51:42,005 | INFO     | did not find any defunct processes belonging to 266152
[2025-11-27 21:52:31] 2025-11-27 20:51:42,005 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:52:31] 2025-11-27 20:51:42,005 | INFO     | ready for new job
[2025-11-27 21:52:31] 2025-11-27 20:51:42,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:52:31] 2025-11-27 20:51:42,006 | INFO     | ***************************************
[2025-11-27 21:52:31] 2025-11-27 20:51:42,006 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:52:31] 2025-11-27 20:51:42,006 | INFO     | ***************************************
[2025-11-27 21:52:31] 2025-11-27 20:51:42,007 | INFO     | 
[2025-11-27 21:52:31] 2025-11-27 20:51:42,007 | INFO     | architecture information:
[2025-11-27 21:52:31] 2025-11-27 20:51:42,007 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:52:31] 2025-11-27 20:51:42,016 | INFO     | cat /etc/os-release:
[2025-11-27 21:52:31] NAME="CentOS Linux"
[2025-11-27 21:52:31] VERSION="7 (Core)"
[2025-11-27 21:52:31] ID="centos"
[2025-11-27 21:52:31] ID_LIKE="rhel fedora"
[2025-11-27 21:52:31] VERSION_ID="7"
[2025-11-27 21:52:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:52:31] ANSI_COLOR="0;31"
[2025-11-27 21:52:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:52:31] HOME_URL="https://www.centos.org/"
[2025-11-27 21:52:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:52:31] 
[2025-11-27 21:52:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:52:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:52:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:52:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:52:31] 
[2025-11-27 21:52:31] 2025-11-27 20:51:42,016 | INFO     | ***************************************
[2025-11-27 21:52:31] 2025-11-27 20:51:42,519 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 21:52:31] 2025-11-27 20:51:42,533 | INFO     | sufficient remaining disk space (338017910784 B)
[2025-11-27 21:52:31] 2025-11-27 20:51:42,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:52:31] 2025-11-27 20:51:42,533 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:52:31] 2025-11-27 20:51:42,533 | INFO     | update_server=False
[2025-11-27 21:52:31] 2025-11-27 20:51:42,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:52:31] 2025-11-27 20:51:42,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:52:31] 2025-11-27 20:51:42,534 | INFO     | aborting loop
[2025-11-27 21:52:31] 2025-11-27 20:51:42,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:52:31] 2025-11-27 20:51:42,545 | INFO     | all payload control threads have been joined
[2025-11-27 21:52:31] 2025-11-27 20:51:42,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:52:31] 2025-11-27 20:51:42,881 | INFO     | all data control threads have been joined
[2025-11-27 21:52:31] 2025-11-27 20:51:43,184 | INFO     | all job control threads have been joined
[2025-11-27 21:52:31] 2025-11-27 20:51:43,539 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:43,539 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:43,540 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:43,550 | INFO     | [payload] control thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:43,560 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:43,887 | INFO     | [data] control thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:44,188 | INFO     | [job] control thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:44,282 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:44,420 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:44,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:52:31] 2025-11-27 20:51:44,713 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:44,813 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:45,019 | INFO     | [job] validate thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:45,020 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:45,072 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:48,478 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:51:53,379 | INFO     | job.realtimelogging is not enabled
[2025-11-27 21:52:31] 2025-11-27 20:51:54,385 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:52:31] 2025-11-27 20:52:12,796 | INFO     | PID=259706 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 21:52:31] 2025-11-27 20:52:12,796 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:52:31] 2025-11-27 20:52:12,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:52:31] 2025-11-27 20:52:12,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:52:31] 2025-11-27 20:52:25,774 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:52:31] 2025-11-27 20:52:25,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473463396160)>', '<ExcThread(monitor, started 140473112966912)>']
[2025-11-27 21:52:31] 2025-11-27 20:52:26,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:52:31] 2025-11-27 20:52:26,871 | INFO     | [monitor] control thread has ended
[2025-11-27 21:52:31] 2025-11-27 20:52:30,961 | INFO     | all workflow threads have been joined
[2025-11-27 21:52:31] 2025-11-27 20:52:30,962 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:52:31] 2025-11-27 20:52:30,962 | INFO     | traces error code: 0
[2025-11-27 21:52:31] 2025-11-27 20:52:30,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:52:31] 2025-11-27 20:52:31,014 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:52:31] 2025-11-27 20:52:31,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:52:31] 2025-11-27 20:52:31,019 [wrapper] pilotpid: 259706
[2025-11-27 21:52:31] 2025-11-27 20:52:31,021 [wrapper] Pilot exit status: 0
[2025-11-27 21:52:31] 2025-11-27 20:52:31,028 [wrapper] pandaids: 6895384329
[2025-11-27 21:52:31] 2025-11-27 20:52:31,044 [wrapper] cleanup supervisor_pilot  318400 259707
[2025-11-27 21:52:31] 2025-11-27 20:52:31,047 [wrapper] Test setup, not cleaning
[2025-11-27 21:52:31] 2025-11-27 20:52:31,049 [wrapper] apfmon messages muted
[2025-11-27 21:52:31] 2025-11-27 20:52:31,051 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:52:31] 2025-11-27 20:52:31,053 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:52:31]  *** Error codes and diagnostics ***
[2025-11-27 21:52:31]     "exeErrorCode": 0,
[2025-11-27 21:52:31]     "exeErrorDiag": "",
[2025-11-27 21:52:31]     "pilotErrorCode": 0,
[2025-11-27 21:52:31]     "pilotErrorDiag": "",
[2025-11-27 21:52:31]  *** Listing of results directory ***
[2025-11-27 21:52:31] total 1310384
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc    576529 Nov 24 05:40 pilot3.tar.gz
[2025-11-27 21:52:31] -rwx------ 1 boinc boinc     36292 Nov 24 05:57 runpilot2-wrapper.sh
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc      5112 Nov 24 05:57 queuedata.json
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc       100 Nov 27 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:52:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 13:39 run_atlas
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc       105 Nov 27 13:39 job.xml
[2025-11-27 21:52:31] -rw-r--r-- 2 boinc boinc 408695175 Nov 27 13:39 EVNT.47483658._001223.pool.root.1
[2025-11-27 21:52:31] -rw-r--r-- 2 boinc boinc    590103 Nov 27 13:39 input.tar.gz
[2025-11-27 21:52:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 13:39 start_atlas.sh
[2025-11-27 21:52:31] drwxrwx--x 2 boinc boinc      4096 Nov 27 13:39 shared
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 13:39 boinc_setup_complete
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc      6445 Nov 27 13:39 init_data.xml
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 13:39 boinc_lockfile
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc      2785 Nov 27 13:39 pandaJob.out
[2025-11-27 21:52:31] -rw------- 1 boinc boinc    991566 Nov 27 13:39 agis_schedconf.cvmfs.json
[2025-11-27 21:52:31] drwx------ 5 boinc boinc      4096 Nov 27 13:39 pilot3
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc       532 Nov 27 21:48 boinc_task_state.xml
[2025-11-27 21:52:31] -rw------- 1 boinc boinc 918568069 Nov 27 21:51 HITS.47556149._002099.pool.root.1
[2025-11-27 21:52:31] -rw------- 1 boinc boinc        95 Nov 27 21:51 pilot_heartbeat.json
[2025-11-27 21:52:31] -rw------- 1 boinc boinc      1038 Nov 27 21:51 memory_monitor_summary.json
[2025-11-27 21:52:31] -rw------- 1 boinc boinc   1516240 Nov 27 21:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:52:31] -rw------- 1 boinc boinc   1176690 Nov 27 21:51 log.47556149._002099.job.log.tgz.1
[2025-11-27 21:52:31] -rw------- 1 boinc boinc      8573 Nov 27 21:51 heartbeat.json
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc      8192 Nov 27 21:52 boinc_mmap_file
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc        28 Nov 27 21:52 wrapper_checkpoint.txt
[2025-11-27 21:52:31] -rw------- 1 boinc boinc      4823 Nov 27 21:52 pilotlog.txt
[2025-11-27 21:52:31] -rw------- 1 boinc boinc   4148721 Nov 27 21:52 log.47556149._002099.job.log.1
[2025-11-27 21:52:31] -rw------- 1 boinc boinc       353 Nov 27 21:52 output.list
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc       620 Nov 27 21:52 runtime_log
[2025-11-27 21:52:31] -rw------- 1 boinc boinc   5345280 Nov 27 21:52 result.tar.gz
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc      8918 Nov 27 21:52 runtime_log.err
[2025-11-27 21:52:31] -rw------- 1 boinc boinc       669 Nov 27 21:52 f9VLDmxodh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1uIKDmgQ8ISn.diag
[2025-11-27 21:52:31] -rw-r--r-- 1 boinc boinc     21208 Nov 27 21:52 stderr.txt
[2025-11-27 21:52:31] HITS file was successfully produced:
[2025-11-27 21:52:31] -rw------- 1 boinc boinc 918568069 Nov 27 21:51 shared/HITS.pool.root.1
[2025-11-27 21:52:31]  *** Contents of shared directory: ***
[2025-11-27 21:52:31] total 1301984
[2025-11-27 21:52:31] -rw-r--r-- 2 boinc boinc 408695175 Nov 27 13:39 ATLAS.root_0
[2025-11-27 21:52:31] -rw-r--r-- 2 boinc boinc    590103 Nov 27 13:39 input.tar.gz
[2025-11-27 21:52:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 13:39 start_atlas.sh
[2025-11-27 21:52:31] -rw------- 1 boinc boinc 918568069 Nov 27 21:51 HITS.pool.root.1
[2025-11-27 21:52:31] -rw------- 1 boinc boinc   5345280 Nov 27 21:52 result.tar.gz
21:52:32 (255981): run_atlas exited; CPU time 87177.340028
21:52:32 (255981): called boinc_finish(0)

</stderr_txt>
]]>

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