Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:22:57 (20985): wrapper (7.7.26015): starting
23:22:57 (20985): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:22:57] Arguments: --nthreads 8
[2025-11-24 23:22:57] Threads: 8
[2025-11-24 23:22:57] Checking for CVMFS
[2025-11-24 23:22:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:22:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:22:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:22:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:22:57] 2.11.2.0 2893 63788 83588 153270 0 80 16780581 20275201 1 130560 0 16612132 99.813 4251223 30104 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 23:22:57] CVMFS is ok
[2025-11-24 23:22:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:22:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:22:57] Further information can be found at the LHC@home message board.
[2025-11-24 23:22:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:22:57] Checking for apptainer binary...
[2025-11-24 23:22:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:22:57] Running /usr/bin/apptainer --version
[2025-11-24 23:22:57] apptainer version 1.3.2-1.el7
[2025-11-24 23:22:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:22:59] c-204-22.aglt2.org
[2025-11-24 23:22:59] apptainer works
[2025-11-24 23:22:59] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:22:59] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:22:59] Starting ATLAS job with PandaID=6895384315
[2025-11-24 23:22:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:07:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:07:40] 2025-11-25 17:07:04,249 | INFO     | monitor loop #3375: job 0:6895384315 is in state 'finished'
[2025-11-25 12:07:40] 2025-11-25 17:07:04,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:07:40] 2025-11-25 17:07:04,743 | INFO     | time since job start (45826s) is within the limit (172800.0s)
[2025-11-25 12:07:40] 2025-11-25 17:07:05,864 | INFO     | PID=24705 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 12:07:40] 2025-11-25 17:07:06,467 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 12:07:40] 2025-11-25 17:07:06,472 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-25 12:07:40] 2025-11-25 17:07:06,474 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895384315/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,475 | INFO     | extracted standard info from prmon json
[2025-11-25 12:07:40] 2025-11-25 17:07:06,475 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:07:40] 2025-11-25 17:07:06,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:07:40] 2025-11-25 17:07:06,491 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:07:40] 2025-11-25 17:07:06,492 | INFO     | sum of square deviations: 131341008022.34354
[2025-11-25 12:07:40] 2025-11-25 17:07:06,504 | INFO     | sum of deviations: 815692629904.073
[2025-11-25 12:07:40] 2025-11-25 17:07:06,504 | INFO     | mean x: 1764067505.5432756
[2025-11-25 12:07:40] 2025-11-25 17:07:06,504 | INFO     | mean y: 2875239.7669773637
[2025-11-25 12:07:40] 2025-11-25 17:07:06,504 | INFO     | intersect: -10952856595.94516
[2025-11-25 12:07:40] 2025-11-25 17:07:06,505 | INFO     | chi2: 5.233555443109532
[2025-11-25 12:07:40] 2025-11-25 17:07:06,506 | INFO     | sum of square deviations: 128735251043.3595
[2025-11-25 12:07:40] 2025-11-25 17:07:06,518 | INFO     | sum of deviations: 1044343069222.0579
[2025-11-25 12:07:40] 2025-11-25 17:07:06,518 | INFO     | mean x: 1764067353.046917
[2025-11-25 12:07:40] 2025-11-25 17:07:06,518 | INFO     | mean y: 2888609.6554959784
[2025-11-25 12:07:40] 2025-11-25 17:07:06,518 | INFO     | intersect: -14307811053.911741
[2025-11-25 12:07:40] 2025-11-25 17:07:06,519 | INFO     | chi2: 2.5303681864695866
[2025-11-25 12:07:40] 2025-11-25 17:07:06,519 | INFO     | current chi2=2.5303681864695866 (change=51.65106753954323 %)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,520 | INFO     | sum of square deviations: 126164192389.35219
[2025-11-25 12:07:40] 2025-11-25 17:07:06,532 | INFO     | sum of deviations: 1098763067501.4169
[2025-11-25 12:07:40] 2025-11-25 17:07:06,532 | INFO     | mean x: 1764067200.5506072
[2025-11-25 12:07:40] 2025-11-25 17:07:06,532 | INFO     | mean y: 2891832.962213225
[2025-11-25 12:07:40] 2025-11-25 17:07:06,532 | INFO     | intersect: -15360357056.024511
[2025-11-25 12:07:40] 2025-11-25 17:07:06,533 | INFO     | chi2: 2.283743132554842
[2025-11-25 12:07:40] 2025-11-25 17:07:06,533 | INFO     | current chi2=2.283743132554842 (change=9.746607439719675 %)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,533 | INFO     | right removable region: 740
[2025-11-25 12:07:40] 2025-11-25 17:07:06,534 | INFO     | sum of square deviations: 128735002163.35951
[2025-11-25 12:07:40] 2025-11-25 17:07:06,546 | INFO     | sum of deviations: 614451341611.7303
[2025-11-25 12:07:40] 2025-11-25 17:07:06,546 | INFO     | mean x: 1764067658.046917
[2025-11-25 12:07:40] 2025-11-25 17:07:06,547 | INFO     | mean y: 2886997.6648793565
[2025-11-25 12:07:40] 2025-11-25 17:07:06,547 | INFO     | intersect: -8416996646.764031
[2025-11-25 12:07:40] 2025-11-25 17:07:06,548 | INFO     | chi2: 3.0998476371429398
[2025-11-25 12:07:40] 2025-11-25 17:07:06,548 | INFO     | current chi2=3.0998476371429398 (change=40.76975641436682 %)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,549 | INFO     | sum of square deviations: 126163740135.45189
[2025-11-25 12:07:40] 2025-11-25 17:07:06,560 | INFO     | sum of deviations: 568192556559.9187
[2025-11-25 12:07:40] 2025-11-25 17:07:06,561 | INFO     | mean x: 1764067810.5492578
[2025-11-25 12:07:40] 2025-11-25 17:07:06,561 | INFO     | mean y: 2889740.125506073
[2025-11-25 12:07:40] 2025-11-25 17:07:06,561 | INFO     | intersect: -7941787535.174984
[2025-11-25 12:07:40] 2025-11-25 17:07:06,562 | INFO     | chi2: 3.0479030135389134
[2025-11-25 12:07:40] 2025-11-25 17:07:06,562 | INFO     | current chi2=3.0479030135389134 (change=1.6757153797372637 %)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,562 | INFO     | left removable region: 20
[2025-11-25 12:07:40] 2025-11-25 17:07:06,563 | INFO     | sum of square deviations: 115738720874.66548
[2025-11-25 12:07:40] 2025-11-25 17:07:06,574 | INFO     | sum of deviations: 796950592280.5669
[2025-11-25 12:07:40] 2025-11-25 17:07:06,575 | INFO     | mean x: 1764067780.0569444
[2025-11-25 12:07:40] 2025-11-25 17:07:06,575 | INFO     | mean y: 2909796.7666666666
[2025-11-25 12:07:40] 2025-11-25 17:07:06,575 | INFO     | intersect: -12144060996.71464
[2025-11-25 12:07:40] 2025-11-25 17:07:06,576 | INFO     | chi2: 0.07145428122617997
[2025-11-25 12:07:40] 2025-11-25 17:07:06,576 | INFO     | current memory leak: 6.89 B/s (using 720 data points, chi2=0.07)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,576 | INFO     | could have reported an average CPU frequency of 2160 MHz (29 samples)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,577 | INFO     | ..............................
[2025-11-25 12:07:40] 2025-11-25 17:07:06,577 | INFO     | . Timing measurements:
[2025-11-25 12:07:40] 2025-11-25 17:07:06,577 | INFO     | . get job = 0 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,577 | INFO     | . initial setup = 2 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,577 | INFO     | . payload setup = 8 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,577 | INFO     | . stage-in = 0 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,577 | INFO     | . payload execution = 45785 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,578 | INFO     | . stage-out = 3 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,578 | INFO     | . log creation = 0 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,578 | INFO     | ..............................
[2025-11-25 12:07:40] 2025-11-25 17:07:06,672 | INFO     | 
[2025-11-25 12:07:40] 2025-11-25 17:07:06,672 | INFO     | job summary report
[2025-11-25 12:07:40] 2025-11-25 17:07:06,673 | INFO     | --------------------------------------------------
[2025-11-25 12:07:40] 2025-11-25 17:07:06,673 | INFO     | PanDA job id: 6895384315
[2025-11-25 12:07:40] 2025-11-25 17:07:06,673 | INFO     | task id: 47556149
[2025-11-25 12:07:40] 2025-11-25 17:07:06,673 | INFO     | errors: (none)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:07:40] 2025-11-25 17:07:06,673 | INFO     | pilot state: finished 
[2025-11-25 12:07:40] 2025-11-25 17:07:06,674 | INFO     | transexitcode: 0
[2025-11-25 12:07:40] 2025-11-25 17:07:06,674 | INFO     | exeerrorcode: 0
[2025-11-25 12:07:40] 2025-11-25 17:07:06,674 | INFO     | exeerrordiag: 
[2025-11-25 12:07:40] 2025-11-25 17:07:06,674 | INFO     | exitcode: 0
[2025-11-25 12:07:40] 2025-11-25 17:07:06,674 | INFO     | exitmsg: OK
[2025-11-25 12:07:40] 2025-11-25 17:07:06,674 | INFO     | cpuconsumptiontime: 354865 s
[2025-11-25 12:07:40] 2025-11-25 17:07:06,675 | INFO     | nevents: 1000
[2025-11-25 12:07:40] 2025-11-25 17:07:06,675 | INFO     | neventsw: 0
[2025-11-25 12:07:40] 2025-11-25 17:07:06,675 | INFO     | pid: 32032
[2025-11-25 12:07:40] 2025-11-25 17:07:06,675 | INFO     | pgrp: 32032
[2025-11-25 12:07:40] 2025-11-25 17:07:06,675 | INFO     | corecount: 8
[2025-11-25 12:07:40] 2025-11-25 17:07:06,675 | INFO     | event service: False
[2025-11-25 12:07:40] 2025-11-25 17:07:06,676 | INFO     | sizes: {0: 2283431, 1: 2284287, 7: 2284549, 12: 2284577, 45797: 2330835, 45802: 2340018, 45811: 2340208}
[2025-11-25 12:07:40] 2025-11-25 17:07:06,676 | INFO     | --------------------------------------------------
[2025-11-25 12:07:40] 2025-11-25 17:07:06,676 | INFO     | 
[2025-11-25 12:07:40] 2025-11-25 17:07:06,676 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 12:07:40] 2025-11-25 17:07:06,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,706 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,706 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:07:40] 2025-11-25 17:07:06,709 | INFO     | job 6895384315 has completed (purged errors)
[2025-11-25 12:07:40] 2025-11-25 17:07:06,710 | INFO     | overall cleanup function is called
[2025-11-25 12:07:40] 2025-11-25 17:07:07,725 | INFO     | --- collectZombieJob: --- 10, [32032]
[2025-11-25 12:07:40] 2025-11-25 17:07:07,726 | INFO     | zombie collector waiting for pid 32032
[2025-11-25 12:07:40] 2025-11-25 17:07:07,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:07:40] 2025-11-25 17:07:07,726 | INFO     | collected zombie processes
[2025-11-25 12:07:40] 2025-11-25 17:07:07,726 | INFO     | will attempt to kill all subprocesses of pid=32032
[2025-11-25 12:07:40] 2025-11-25 17:07:07,818 | INFO     | process IDs to be killed: [32032] (in reverse order)
[2025-11-25 12:07:40] 2025-11-25 17:07:07,878 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:07:40] 2025-11-25 17:07:07,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:07:40] 2025-11-25 17:07:07,883 | INFO     | did not find any defunct processes belonging to 32032
[2025-11-25 12:07:40] 2025-11-25 17:07:07,886 | INFO     | did not find any defunct processes belonging to 32032
[2025-11-25 12:07:40] 2025-11-25 17:07:07,889 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:07:40] 2025-11-25 17:07:07,889 | INFO     | ready for new job
[2025-11-25 12:07:40] 2025-11-25 17:07:07,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:07:40] 2025-11-25 17:07:07,893 | INFO     | ***************************************
[2025-11-25 12:07:40] 2025-11-25 17:07:07,893 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:07:40] 2025-11-25 17:07:07,893 | INFO     | ***************************************
[2025-11-25 12:07:40] 2025-11-25 17:07:07,893 | INFO     | 
[2025-11-25 12:07:40] 2025-11-25 17:07:07,893 | INFO     | architecture information:
[2025-11-25 12:07:40] 2025-11-25 17:07:07,894 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:07:40] 2025-11-25 17:07:07,914 | INFO     | cat /etc/os-release:
[2025-11-25 12:07:40] NAME="CentOS Linux"
[2025-11-25 12:07:40] VERSION="7 (Core)"
[2025-11-25 12:07:40] ID="centos"
[2025-11-25 12:07:40] ID_LIKE="rhel fedora"
[2025-11-25 12:07:40] VERSION_ID="7"
[2025-11-25 12:07:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:07:40] ANSI_COLOR="0;31"
[2025-11-25 12:07:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:07:40] HOME_URL="https://www.centos.org/"
[2025-11-25 12:07:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:07:40] 
[2025-11-25 12:07:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:07:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:07:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:07:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:07:40] 
[2025-11-25 12:07:40] 2025-11-25 17:07:07,915 | INFO     | ***************************************
[2025-11-25 12:07:40] 2025-11-25 17:07:08,418 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 12:07:40] 2025-11-25 17:07:08,439 | INFO     | sufficient remaining disk space (17414750208 B)
[2025-11-25 12:07:40] 2025-11-25 17:07:08,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:07:40] 2025-11-25 17:07:08,440 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:07:40] 2025-11-25 17:07:08,440 | INFO     | update_server=False
[2025-11-25 12:07:40] 2025-11-25 17:07:08,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:07:40] 2025-11-25 17:07:08,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:07:40] 2025-11-25 17:07:08,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:07:40] 2025-11-25 17:07:08,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:07:40] 2025-11-25 17:07:08,442 | INFO     | aborting loop
[2025-11-25 12:07:40] 2025-11-25 17:07:08,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:07:40] 2025-11-25 17:07:08,791 | INFO     | all payload control threads have been joined
[2025-11-25 12:07:40] 2025-11-25 17:07:08,915 | INFO     | all job control threads have been joined
[2025-11-25 12:07:40] 2025-11-25 17:07:09,386 | INFO     | all data control threads have been joined
[2025-11-25 12:07:40] 2025-11-25 17:07:09,446 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:09,446 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:09,447 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:09,448 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:09,454 | INFO     | [job] validate thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:09,529 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:09,796 | INFO     | [payload] control thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:09,920 | INFO     | [job] control thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:10,192 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:10,204 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:10,392 | INFO     | [data] control thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:10,446 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:10,447 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:10,469 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:10,864 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:12,481 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:07:40] 2025-11-25 17:07:33,988 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:07:40] 2025-11-25 17:07:34,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639748990784)>', '<ExcThread(monitor, started 140639022864128)>']
[2025-11-25 12:07:40] 2025-11-25 17:07:38,061 | INFO     | PID=24705 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 12:07:40] 2025-11-25 17:07:38,062 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:07:40] 2025-11-25 17:07:38,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:07:40] 2025-11-25 17:07:38,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:07:40] 2025-11-25 17:07:38,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:07:40] 2025-11-25 17:07:38,066 | INFO     | [monitor] control thread has ended
[2025-11-25 12:07:40] 2025-11-25 17:07:39,701 | INFO     | all workflow threads have been joined
[2025-11-25 12:07:40] 2025-11-25 17:07:39,701 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:07:40] 2025-11-25 17:07:39,702 | INFO     | traces error code: 0
[2025-11-25 12:07:40] 2025-11-25 17:07:39,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:07:40] 2025-11-25 17:07:39,828 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:07:40] 2025-11-25 17:07:39,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:07:40] 2025-11-25 17:07:39,837 [wrapper] pilotpid: 24705
[2025-11-25 12:07:40] 2025-11-25 17:07:39,842 [wrapper] Pilot exit status: 0
[2025-11-25 12:07:40] 2025-11-25 17:07:39,860 [wrapper] pandaids: 6895384315
[2025-11-25 12:07:40] 2025-11-25 17:07:39,906 [wrapper] cleanup supervisor_pilot 24757 24706
[2025-11-25 12:07:40] 2025-11-25 17:07:39,911 [wrapper] Test setup, not cleaning
[2025-11-25 12:07:40] 2025-11-25 17:07:39,916 [wrapper] apfmon messages muted
[2025-11-25 12:07:40] 2025-11-25 17:07:39,921 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:07:40] 2025-11-25 17:07:39,926 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:07:40]  *** Error codes and diagnostics ***
[2025-11-25 12:07:40]     "exeErrorCode": 0,
[2025-11-25 12:07:40]     "exeErrorDiag": "",
[2025-11-25 12:07:40]     "pilotErrorCode": 0,
[2025-11-25 12:07:40]     "pilotErrorDiag": "",
[2025-11-25 12:07:40]  *** Listing of results directory ***
[2025-11-25 12:07:40] total 1332520
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 23:46 queuedata.json
[2025-11-25 12:07:40] -rwx------ 1 boincer umatlas     36292 Nov 23 23:47 runpilot2-wrapper.sh
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas       100 Nov 24 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:07:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 23:22 run_atlas
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas       105 Nov 24 23:22 job.xml
[2025-11-25 12:07:40] -rw-r--r-- 2 boincer umatlas 413036822 Nov 24 23:22 EVNT.47483658._001222.pool.root.1
[2025-11-25 12:07:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:22 start_atlas.sh
[2025-11-25 12:07:40] drwxrwx--x 2 boincer umatlas      4096 Nov 24 23:22 shared
[2025-11-25 12:07:40] -rw-r--r-- 2 boincer umatlas    590107 Nov 24 23:22 input.tar.gz
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas         0 Nov 24 23:22 boinc_lockfile
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 23:22 pandaJob.out
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas        57 Nov 24 23:23 setup.sh.local
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas    991801 Nov 24 23:23 agis_schedconf.cvmfs.json
[2025-11-25 12:07:40] drwx------ 5 boincer umatlas      4096 Nov 24 23:23 pilot3
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas       532 Nov 25 11:56 boinc_task_state.xml
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 12:02 init_data.xml
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas 930925306 Nov 25 12:06 HITS.47556149._002085.pool.root.1
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas        95 Nov 25 12:06 pilot_heartbeat.json
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas      1062 Nov 25 12:06 memory_monitor_summary.json
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas   1516240 Nov 25 12:06 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas   1995623 Nov 25 12:06 log.47556149._002085.job.log.tgz.1
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas      8654 Nov 25 12:07 heartbeat.json
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 12:07 boinc_mmap_file
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas        29 Nov 25 12:07 wrapper_checkpoint.txt
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas      4746 Nov 25 12:07 pilotlog.txt
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas   6312879 Nov 25 12:07 log.47556149._002085.job.log.1
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas       353 Nov 25 12:07 output.list
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas       620 Nov 25 12:07 runtime_log
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas   8325120 Nov 25 12:07 result.tar.gz
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 12:07 runtime_log.err
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas       668 Nov 25 12:07 cEYLDmCfdh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3QLKDm5e7kAn.diag
[2025-11-25 12:07:40] -rw-r--r-- 1 boincer umatlas     21402 Nov 25 12:07 stderr.txt
[2025-11-25 12:07:40] HITS file was successfully produced:
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas 930925306 Nov 25 12:06 shared/HITS.pool.root.1
[2025-11-25 12:07:40]  *** Contents of shared directory: ***
[2025-11-25 12:07:40] total 1321200
[2025-11-25 12:07:40] -rw-r--r-- 2 boincer umatlas 413036822 Nov 24 23:22 ATLAS.root_0
[2025-11-25 12:07:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:22 start_atlas.sh
[2025-11-25 12:07:40] -rw-r--r-- 2 boincer umatlas    590107 Nov 24 23:22 input.tar.gz
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas 930925306 Nov 25 12:06 HITS.pool.root.1
[2025-11-25 12:07:40] -rw------- 1 boincer umatlas   8325120 Nov 25 12:07 result.tar.gz
12:07:42 (20985): run_atlas exited; CPU time 350837.206941
12:07:42 (20985): called boinc_finish(0)

</stderr_txt>
]]>

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