Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:03 (4140776): wrapper (7.7.26015): starting
00:13:03 (4140776): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:13:03] Arguments: --nthreads 9
[2025-11-25 00:13:03] Threads: 9
[2025-11-25 00:13:03] Checking for CVMFS
[2025-11-25 00:13:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:13:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:13:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:13:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:13:06] 2.13.3.0 10978 28128 344708 153270 0 185 21727480 40960001 17225 16776704 0 63809952 99.527 82002841 38842 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:13:06] CVMFS is ok
[2025-11-25 00:13:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:13:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:13:06] Further information can be found at the LHC@home message board.
[2025-11-25 00:13:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:13:06] Checking for apptainer binary...
[2025-11-25 00:13:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:13:06] Running /usr/bin/apptainer --version
[2025-11-25 00:13:06] apptainer version 1.4.4-1.el9
[2025-11-25 00:13:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:13:06] c6-8-12-1.aglt2.org
[2025-11-25 00:13:06] apptainer works
[2025-11-25 00:13:07] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:13:07] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:13:07] Starting ATLAS job with PandaID=6895383689
[2025-11-25 00:13:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:30:03]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:30:03] 2025-11-26 04:29:18,720 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:30:03] 2025-11-26 04:29:18,728 | INFO     | sum of square deviations: 795435911445.4774
[2025-11-25 23:30:03] 2025-11-26 04:29:18,757 | INFO     | sum of deviations: 5533812642033.753
[2025-11-25 23:30:03] 2025-11-26 04:29:18,757 | INFO     | mean x: 1764089576.47626
[2025-11-25 23:30:03] 2025-11-26 04:29:18,757 | INFO     | mean y: 3030469.008035062
[2025-11-25 23:30:03] 2025-11-26 04:29:18,757 | INFO     | intersect: -12269663106.322748
[2025-11-25 23:30:03] 2025-11-26 04:29:18,758 | INFO     | chi2: 16.269120133265833
[2025-11-25 23:30:03] 2025-11-26 04:29:18,760 | INFO     | sum of square deviations: 786753224610.0
[2025-11-25 23:30:03] 2025-11-26 04:29:18,785 | INFO     | sum of deviations: 6026599923501.989
[2025-11-25 23:30:03] 2025-11-26 04:29:18,785 | INFO     | mean x: 1764089424.0
[2025-11-25 23:30:03] 2025-11-26 04:29:18,785 | INFO     | mean y: 3039124.034457478
[2025-11-25 23:30:03] 2025-11-26 04:29:18,785 | INFO     | intersect: -13510043320.589993
[2025-11-25 23:30:03] 2025-11-26 04:29:18,786 | INFO     | chi2: 13.048850718697972
[2025-11-25 23:30:03] 2025-11-26 04:29:18,787 | INFO     | current chi2=13.048850718697972 (change=19.79375275484815 %)
[2025-11-25 23:30:03] 2025-11-26 04:29:18,787 | INFO     | right removable region: 1363
[2025-11-25 23:30:03] 2025-11-26 04:29:18,788 | INFO     | sum of square deviations: 786747816350.0
[2025-11-25 23:30:03] 2025-11-26 04:29:18,814 | INFO     | sum of deviations: 4938919674743.008
[2025-11-25 23:30:03] 2025-11-26 04:29:18,815 | INFO     | mean x: 1764089729.0
[2025-11-25 23:30:03] 2025-11-26 04:29:18,815 | INFO     | mean y: 3040911.6326979473
[2025-11-25 23:30:03] 2025-11-26 04:29:18,815 | INFO     | intersect: -11071279587.90352
[2025-11-25 23:30:03] 2025-11-26 04:29:18,816 | INFO     | chi2: 11.782163786026054
[2025-11-25 23:30:03] 2025-11-26 04:29:18,816 | INFO     | current chi2=11.782163786026054 (change=27.579588265902586 %)
[2025-11-25 23:30:03] 2025-11-26 04:29:18,817 | INFO     | sum of square deviations: 778123247763.0199
[2025-11-25 23:30:03] 2025-11-26 04:29:18,846 | INFO     | sum of deviations: 4426804453587.228
[2025-11-25 23:30:03] 2025-11-26 04:29:18,846 | INFO     | mean x: 1764089881.5231788
[2025-11-25 23:30:03] 2025-11-26 04:29:18,846 | INFO     | mean y: 3049967.9926416483
[2025-11-25 23:30:03] 2025-11-26 04:29:18,846 | INFO     | intersect: -10032996335.090332
[2025-11-25 23:30:03] 2025-11-26 04:29:18,848 | INFO     | chi2: 8.591598163565752
[2025-11-25 23:30:03] 2025-11-26 04:29:18,848 | INFO     | current chi2=8.591598163565752 (change=27.079623746568465 %)
[2025-11-25 23:30:03] 2025-11-26 04:29:18,849 | INFO     | sum of square deviations: 769561889174.0671
[2025-11-25 23:30:03] 2025-11-26 04:29:18,879 | INFO     | sum of deviations: 3984964875094.185
[2025-11-25 23:30:03] 2025-11-26 04:29:18,879 | INFO     | mean x: 1764090034.0465288
[2025-11-25 23:30:03] 2025-11-26 04:29:18,879 | INFO     | mean y: 3057837.0605613
[2025-11-25 23:30:03] 2025-11-26 04:29:18,879 | INFO     | intersect: -9131797878.993542
[2025-11-25 23:30:03] 2025-11-26 04:29:18,880 | INFO     | chi2: 6.278300196525949
[2025-11-25 23:30:03] 2025-11-26 04:29:18,881 | INFO     | current chi2=6.278300196525949 (change=26.92511827252079 %)
[2025-11-25 23:30:03] 2025-11-26 04:29:18,882 | INFO     | sum of square deviations: 761064334299.9579
[2025-11-25 23:30:03] 2025-11-26 04:29:18,912 | INFO     | sum of deviations: 3783114135730.8
[2025-11-25 23:30:03] 2025-11-26 04:29:18,913 | INFO     | mean x: 1764090186.562639
[2025-11-25 23:30:03] 2025-11-26 04:29:18,913 | INFO     | mean y: 3061456.3691623425
[2025-11-25 23:30:03] 2025-11-26 04:29:18,913 | INFO     | intersect: -8765914070.026718
[2025-11-25 23:30:03] 2025-11-26 04:29:18,914 | INFO     | chi2: 5.778507612543218
[2025-11-25 23:30:03] 2025-11-26 04:29:18,915 | INFO     | current chi2=5.778507612543218 (change=7.960635336604124 %)
[2025-11-25 23:30:03] 2025-11-26 04:29:18,915 | INFO     | left removable region: 40
[2025-11-25 23:30:03] 2025-11-26 04:29:18,916 | INFO     | sum of square deviations: 717910040754.6667
[2025-11-25 23:30:03] 2025-11-26 04:29:18,946 | INFO     | sum of deviations: 4126612164160.67
[2025-11-25 23:30:03] 2025-11-26 04:29:18,946 | INFO     | mean x: 1764090613.4603174
[2025-11-25 23:30:03] 2025-11-26 04:29:18,947 | INFO     | mean y: 3076971.365079365
[2025-11-25 23:30:03] 2025-11-26 04:29:18,947 | INFO     | intersect: -10137076210.688995
[2025-11-25 23:30:03] 2025-11-26 04:29:18,948 | INFO     | chi2: 1.703780782706112
[2025-11-25 23:30:03] 2025-11-26 04:29:18,948 | INFO     | current memory leak: 5.75 B/s (using 1323 data points, chi2=1.70)
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | could have reported an average CPU frequency of 2912 MHz (49 samples)
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | ..............................
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . Timing measurements:
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . get job = 0 s
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . initial setup = 5 s
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . payload setup = 62 s
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . stage-in = 0 s
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . payload execution = 83522 s
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . stage-out = 6 s
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | . log creation = 1 s
[2025-11-25 23:30:03] 2025-11-26 04:29:18,950 | INFO     | ..............................
[2025-11-25 23:30:03] 2025-11-26 04:29:19,070 | INFO     | time since job start (83699s) is within the limit (172800.0s)
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | 
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | job summary report
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | --------------------------------------------------
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | PanDA job id: 6895383689
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | task id: 47556137
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | errors: (none)
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | pilot state: finished 
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | transexitcode: 0
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | exeerrorcode: 0
[2025-11-25 23:30:03] 2025-11-26 04:29:19,483 | INFO     | exeerrordiag: 
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | exitcode: 0
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | exitmsg: OK
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | cpuconsumptiontime: 233241 s
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | nevents: 1000
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | neventsw: 0
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | pid: 4156501
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | pgrp: 4156501
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | corecount: 9
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | event service: False
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | sizes: {0: 2284138, 1: 2284166, 2: 2284337, 13: 2284365, 25: 2284421, 36: 2284449, 41: 2284867, 47: 2284895, 83589: 2348253, 83595: 2357252, 83598: 2357308, 83613:
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | --------------------------------------------------
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | 
[2025-11-25 23:30:03] 2025-11-26 04:29:19,484 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:30:03] 2025-11-26 04:29:19,519 | INFO     | job 6895383689 has completed (purged errors)
[2025-11-25 23:30:03] 2025-11-26 04:29:19,519 | INFO     | overall cleanup function is called
[2025-11-25 23:30:03] 2025-11-26 04:29:20,536 | INFO     | --- collectZombieJob: --- 10, [4156501]
[2025-11-25 23:30:03] 2025-11-26 04:29:20,536 | INFO     | zombie collector waiting for pid 4156501
[2025-11-25 23:30:03] 2025-11-26 04:29:20,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:30:03] 2025-11-26 04:29:20,536 | INFO     | collected zombie processes
[2025-11-25 23:30:03] 2025-11-26 04:29:20,536 | INFO     | will attempt to kill all subprocesses of pid=4156501
[2025-11-25 23:30:03] 2025-11-26 04:29:21,104 | INFO     | process IDs to be killed: [4156501] (in reverse order)
[2025-11-25 23:30:03] 2025-11-26 04:29:21,201 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:30:03] 2025-11-26 04:29:21,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:30:03] 2025-11-26 04:29:21,225 | INFO     | did not find any defunct processes belonging to 4156501
[2025-11-25 23:30:03] 2025-11-26 04:29:21,235 | INFO     | did not find any defunct processes belonging to 4156501
[2025-11-25 23:30:03] 2025-11-26 04:29:21,236 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:30:03] 2025-11-26 04:29:21,237 | INFO     | ready for new job
[2025-11-25 23:30:03] 2025-11-26 04:29:21,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:30:03] 2025-11-26 04:29:21,242 | INFO     | ***************************************
[2025-11-25 23:30:03] 2025-11-26 04:29:21,242 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:30:03] 2025-11-26 04:29:21,242 | INFO     | ***************************************
[2025-11-25 23:30:03] 2025-11-26 04:29:21,242 | INFO     | 
[2025-11-25 23:30:03] 2025-11-26 04:29:21,245 | INFO     | architecture information:
[2025-11-25 23:30:03] 2025-11-26 04:29:21,246 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:30:03] 2025-11-26 04:29:21,263 | INFO     | cat /etc/os-release:
[2025-11-25 23:30:03] NAME="CentOS Linux"
[2025-11-25 23:30:03] VERSION="7 (Core)"
[2025-11-25 23:30:03] ID="centos"
[2025-11-25 23:30:03] ID_LIKE="rhel fedora"
[2025-11-25 23:30:03] VERSION_ID="7"
[2025-11-25 23:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:30:03] ANSI_COLOR="0;31"
[2025-11-25 23:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:30:03] HOME_URL="https://www.centos.org/"
[2025-11-25 23:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:30:03] 
[2025-11-25 23:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:30:03] 
[2025-11-25 23:30:03] 2025-11-26 04:29:21,263 | INFO     | ***************************************
[2025-11-25 23:30:03] 2025-11-26 04:29:21,772 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 23:30:03] 2025-11-26 04:29:21,792 | INFO     | sufficient remaining disk space (54493446144 B)
[2025-11-25 23:30:03] 2025-11-26 04:29:21,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:30:03] 2025-11-26 04:29:21,792 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:30:03] 2025-11-26 04:29:21,793 | INFO     | update_server=False
[2025-11-25 23:30:03] 2025-11-26 04:29:21,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:30:03] 2025-11-26 04:29:22,202 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:30:03] 2025-11-26 04:29:22,427 | INFO     | all payload control threads have been joined
[2025-11-25 23:30:03] 2025-11-26 04:29:22,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:30:03] 2025-11-26 04:29:22,631 | INFO     | aborting loop
[2025-11-25 23:30:03] 2025-11-26 04:29:22,711 | INFO     | all data control threads have been joined
[2025-11-25 23:30:03] 2025-11-26 04:29:22,808 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:22,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:22,997 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,010 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,087 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,334 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,372 | INFO     | all job control threads have been joined
[2025-11-25 23:30:03] 2025-11-26 04:29:23,433 | INFO     | [payload] control thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:30:03] 2025-11-26 04:29:23,523 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,637 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,716 | INFO     | [data] control thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,783 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:23,839 | INFO     | [job] validate thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:24,209 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:24,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:30:03] 2025-11-26 04:29:24,378 | INFO     | [job] control thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:25,257 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:27,521 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:30:03] 2025-11-26 04:29:32,572 [wrapper] supervise_pilot (15 min periods counter: 94)
[2025-11-25 23:30:03] 2025-11-26 04:29:52,915 | INFO     | PID=4147620 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:30:03] 2025-11-26 04:29:52,915 | INFO     | .. there are 18 such processes running
[2025-11-25 23:30:03] 2025-11-26 04:29:52,915 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:30:03] 2025-11-26 04:29:52,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:30:03] 2025-11-26 04:29:52,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:30:03] 2025-11-26 04:29:56,717 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:30:03] 2025-11-26 04:29:57,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139856264763200)>', '<ExcThread(monitor, started 139855904352000)>']
[2025-11-25 23:30:03] 2025-11-26 04:29:57,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:30:03] 2025-11-26 04:29:57,949 | INFO     | [monitor] control thread has ended
[2025-11-25 23:30:03] 2025-11-26 04:30:02,284 | INFO     | all workflow threads have been joined
[2025-11-25 23:30:03] 2025-11-26 04:30:02,284 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:30:03] 2025-11-26 04:30:02,284 | INFO     | traces error code: 0
[2025-11-25 23:30:03] 2025-11-26 04:30:02,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:30:03] 2025-11-26 04:30:02,608 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:30:03] 2025-11-26 04:30:02,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:30:03] 2025-11-26 04:30:02,682 [wrapper] pilotpid: 4147620
[2025-11-25 23:30:03] 2025-11-26 04:30:02,703 [wrapper] Pilot exit status: 0
[2025-11-25 23:30:03] 2025-11-26 04:30:02,815 [wrapper] pandaids: 6895383689
[2025-11-25 23:30:03] 2025-11-26 04:30:03,194 [wrapper] cleanup supervisor_pilot 3541412 4147621
[2025-11-25 23:30:03] 2025-11-26 04:30:03,240 [wrapper] Test setup, not cleaning
[2025-11-25 23:30:03] 2025-11-26 04:30:03,277 [wrapper] apfmon messages muted
[2025-11-25 23:30:03] 2025-11-26 04:30:03,311 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:30:03] 2025-11-26 04:30:03,314 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:30:03]  *** Error codes and diagnostics ***
[2025-11-25 23:30:03]     "exeErrorCode": 0,
[2025-11-25 23:30:03]     "exeErrorDiag": "",
[2025-11-25 23:30:03]     "pilotErrorCode": 0,
[2025-11-25 23:30:03]     "pilotErrorDiag": "",
[2025-11-25 23:30:03]  *** Listing of results directory ***
[2025-11-25 23:30:03] total 1316488
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 23:43 queuedata.json
[2025-11-25 23:30:03] -rwx------. 1 boincer umatlas     36292 Nov 23 23:44 runpilot2-wrapper.sh
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:30:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:13 run_atlas
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:13 job.xml
[2025-11-25 23:30:03] -rw-r--r--. 2 boincer umatlas 408371910 Nov 25 00:13 EVNT.47483658._001012.pool.root.1
[2025-11-25 23:30:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-25 23:30:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:13 shared
[2025-11-25 23:30:03] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:13 input.tar.gz
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:13 boinc_lockfile
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:13 pandaJob.out
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas        57 Nov 25 00:13 setup.sh.local
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas    991801 Nov 25 00:14 agis_schedconf.cvmfs.json
[2025-11-25 23:30:03] drwx------. 5 boincer umatlas      4096 Nov 25 00:14 pilot3
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:15 boinc_task_state.xml
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas      6845 Nov 25 23:18 init_data.xml
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas 909979973 Nov 25 23:28 HITS.47556137._009982.pool.root.1
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas      1058 Nov 25 23:28 memory_monitor_summary.json
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas        95 Nov 25 23:28 pilot_heartbeat.json
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas   2507497 Nov 25 23:29 log.47556137._009982.job.log.tgz.1
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas      8624 Nov 25 23:29 heartbeat.json
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:30 wrapper_checkpoint.txt
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:30 boinc_mmap_file
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas      4824 Nov 25 23:30 pilotlog.txt
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas  10394110 Nov 25 23:30 log.47556137._009982.job.log.1
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas       353 Nov 25 23:30 output.list
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:30 runtime_log
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas  12922880 Nov 25 23:30 result.tar.gz
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas       661 Nov 25 23:30 3byLDmDcdh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuQLKDmAl7jYn.diag
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 23:30 runtime_log.err
[2025-11-25 23:30:03] -rw-r--r--. 1 boincer umatlas     21162 Nov 25 23:30 stderr.txt
[2025-11-25 23:30:03] HITS file was successfully produced:
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas 909979973 Nov 25 23:28 shared/HITS.pool.root.1
[2025-11-25 23:30:03]  *** Contents of shared directory: ***
[2025-11-25 23:30:03] total 1300684
[2025-11-25 23:30:03] -rw-r--r--. 2 boincer umatlas 408371910 Nov 25 00:13 ATLAS.root_0
[2025-11-25 23:30:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-25 23:30:03] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:13 input.tar.gz
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas 909979973 Nov 25 23:28 HITS.pool.root.1
[2025-11-25 23:30:03] -rw-------. 1 boincer umatlas  12922880 Nov 25 23:30 result.tar.gz
23:30:05 (4140776): run_atlas exited; CPU time 234576.893630
23:30:05 (4140776): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN