Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:57:22 (3265137): wrapper (7.7.26015): starting
19:57:22 (3265137): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 19:57:22] Arguments: --nthreads 8
[2025-11-24 19:57:22] Threads: 8
[2025-11-24 19:57:22] Checking for CVMFS
[2025-11-24 19:57:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:57:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:57:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:57:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:57:22] 2.11.3.0 323444 26435 193916 153268 1 465 32845790 45568000 18190 130560 0 192084410 99.796 108176613 17159 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 19:57:22] CVMFS is ok
[2025-11-24 19:57:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:57:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:57:22] Further information can be found at the LHC@home message board.
[2025-11-24 19:57:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:57:22] Checking for apptainer binary...
[2025-11-24 19:57:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:57:22] Running /usr/bin/apptainer --version
[2025-11-24 19:57:22] apptainer version 1.4.1-1.el9
[2025-11-24 19:57:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:57:23] wns0003.triumf.lcg
[2025-11-24 19:57:23] apptainer works
[2025-11-24 19:57:23] Set ATHENA_PROC_NUMBER=8
[2025-11-24 19:57:23] Set ATHENA_CORE_NUMBER=8
[2025-11-24 19:57:23] Starting ATLAS job with PandaID=6895882691
[2025-11-24 19:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 20:03:11]  *** The last 200 lines of the pilot log: ***
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | wrong length of table data, x=[1764043107.0, 1764043168.0, 1764043229.0], y=[2051.0, 773837.0, 255286.0] (must be same and length>=4)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | ..............................
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . Timing measurements:
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . get job = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . initial setup = 3 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . payload setup = 10 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . stage-in = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . payload execution = 134 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | . stage-out = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | . log creation = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | ..............................
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895882691/pilotlog.txt
[2025-11-24 20:03:11] 2025-11-25 04:02:38,638 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 20:03:11] - Log from pilotlog.txt -
[2025-11-24 20:03:11] 2025-11-25 04:02:38,525 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895882691/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,526 | INFO     | extracted standard info from prmon json
[2025-11-24 20:03:11] 2025-11-25 04:02:38,526 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 20:03:11] 2025-11-25 04:02:38,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | wrong length of table data, x=[1764043107.0, 1764043168.0, 1764043229.0], y=[2051.0, 773837.0, 255286.0] (must be same and length>=4)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | ..............................
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . Timing measurements:
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . get job = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . initial setup = 3 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . payload setup = 10 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . stage-in = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . payload execution = 134 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | . stage-out = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | . log creation = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | ..............................
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895882691/pilotlog.txt
[2025-11-24 20:03:11] 2025-11-25 04:02:38,639 | WARNING  | 
[2025-11-24 20:03:11] [begin log extracts]
[2025-11-24 20:03:11] - Log from pilotlog.txt -
[2025-11-24 20:03:11] 2025-11-25 04:02:38,525 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895882691/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,526 | INFO     | extracted standard info from prmon json
[2025-11-24 20:03:11] 2025-11-25 04:02:38,526 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 20:03:11] 2025-11-25 04:02:38,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 20:03:11] 2025-11-25 04:02:38,527 | WARNING  | wrong length of table data, x=[1764043107.0, 1764043168.0, 1764043229.0], y=[2051.0, 773837.0, 255286.0] (must be same and length>=4)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | ..............................
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . Timing measurements:
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . get job = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . initial setup = 3 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . payload setup = 10 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . stage-in = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,545 | INFO     | . payload execution = 134 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | . stage-out = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | . log creation = 0 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | ..............................
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 20:03:11] 2025-11-25 04:02:38,546 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895882691/pilotlog.txt
[2025-11-24 20:03:11] [end log extracts]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,639 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,640 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 20:03:11] 2025-11-25 04:02:38,746 | INFO     | 
[2025-11-24 20:03:11] 2025-11-25 04:02:38,746 | INFO     | job summary report
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | --------------------------------------------------
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | PanDA job id: 6895882691
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | task id: 47556149
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 20:00:26,776 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | pilot state: failed 
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | transexitcode: 65
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | exeerrorcode: 65
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | exitcode: 65
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | cpuconsumptiontime: 51 s
[2025-11-24 20:03:11] 2025-11-25 04:02:38,747 | INFO     | nevents: 0
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | neventsw: 0
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | pid: 3275428
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | pgrp: 3275428
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | corecount: 8
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | event service: False
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | sizes: {0: 2284135, 1: 2284334, 10: 2284596, 12: 2284624, 147: 2310152, 148: 2314442, 151: 2314598, 274: 2314764}
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | --------------------------------------------------
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | 
[2025-11-24 20:03:11] 2025-11-25 04:02:38,748 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 20:03:11] 2025-11-25 04:02:38,763 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,763 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 20:03:11] 2025-11-25 04:02:38,765 | INFO     | job 6895882691 has completed (purged errors)
[2025-11-24 20:03:11] 2025-11-25 04:02:38,765 | INFO     | overall cleanup function is called
[2025-11-24 20:03:11] 2025-11-25 04:02:39,773 | INFO     | --- collectZombieJob: --- 10, [3275428]
[2025-11-24 20:03:11] 2025-11-25 04:02:39,773 | INFO     | zombie collector waiting for pid 3275428
[2025-11-24 20:03:11] 2025-11-25 04:02:39,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 20:03:11] 2025-11-25 04:02:39,773 | INFO     | collected zombie processes
[2025-11-24 20:03:11] 2025-11-25 04:02:39,774 | INFO     | will attempt to kill all subprocesses of pid=3275428
[2025-11-24 20:03:11] 2025-11-25 04:02:40,003 | INFO     | process IDs to be killed: [3275428] (in reverse order)
[2025-11-24 20:03:11] 2025-11-25 04:02:40,066 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 20:03:11] 2025-11-25 04:02:40,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 20:03:11] 2025-11-25 04:02:40,079 | INFO     | did not find any defunct processes belonging to 3275428
[2025-11-24 20:03:11] 2025-11-25 04:02:40,086 | INFO     | did not find any defunct processes belonging to 3275428
[2025-11-24 20:03:11] 2025-11-25 04:02:40,087 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 20:03:11] 2025-11-25 04:02:40,087 | INFO     | ready for new job
[2025-11-24 20:03:11] 2025-11-25 04:02:40,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 20:03:11] 2025-11-25 04:02:40,088 | INFO     | ***************************************
[2025-11-24 20:03:11] 2025-11-25 04:02:40,089 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 20:03:11] 2025-11-25 04:02:40,089 | INFO     | ***************************************
[2025-11-24 20:03:11] 2025-11-25 04:02:40,089 | INFO     | 
[2025-11-24 20:03:11] 2025-11-25 04:02:40,090 | INFO     | architecture information:
[2025-11-24 20:03:11] 2025-11-25 04:02:40,091 | INFO     | executing command: cat /etc/os-release
[2025-11-24 20:03:11] 2025-11-25 04:02:40,242 | INFO     | cat /etc/os-release:
[2025-11-24 20:03:11] NAME="CentOS Linux"
[2025-11-24 20:03:11] VERSION="7 (Core)"
[2025-11-24 20:03:11] ID="centos"
[2025-11-24 20:03:11] ID_LIKE="rhel fedora"
[2025-11-24 20:03:11] VERSION_ID="7"
[2025-11-24 20:03:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 20:03:11] ANSI_COLOR="0;31"
[2025-11-24 20:03:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 20:03:11] HOME_URL="https://www.centos.org/"
[2025-11-24 20:03:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 20:03:11] 
[2025-11-24 20:03:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 20:03:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 20:03:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 20:03:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 20:03:11] 
[2025-11-24 20:03:11] 2025-11-25 04:02:40,243 | INFO     | ***************************************
[2025-11-24 20:03:11] 2025-11-25 04:02:40,746 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 20:03:11] 2025-11-25 04:02:40,763 | INFO     | sufficient remaining disk space (846592999424 B)
[2025-11-24 20:03:11] 2025-11-25 04:02:40,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 20:03:11] 2025-11-25 04:02:40,763 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 20:03:11] 2025-11-25 04:02:40,763 | INFO     | update_server=False
[2025-11-24 20:03:11] 2025-11-25 04:02:40,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 20:03:11] 2025-11-25 04:02:40,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:03:11] 2025-11-25 04:02:40,764 | INFO     | aborting loop
[2025-11-24 20:03:11] 2025-11-25 04:02:41,109 | INFO     | all payload control threads have been joined
[2025-11-24 20:03:11] 2025-11-25 04:02:41,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 20:03:11] 2025-11-25 04:02:41,657 | INFO     | all data control threads have been joined
[2025-11-24 20:03:11] 2025-11-25 04:02:41,730 | INFO     | all job control threads have been joined
[2025-11-24 20:03:11] 2025-11-25 04:02:41,768 | INFO     | [job] retrieve thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:41,773 | INFO     | [job] job monitor thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,044 | INFO     | [payload] validate_post thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,117 | INFO     | [payload] control thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,240 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,339 | INFO     | [monitor] cgroup control has ended
[2025-11-24 20:03:11] 2025-11-25 04:02:42,347 | INFO     | [data] copytool_in thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,390 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,391 | INFO     | [job] validate thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,591 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,663 | INFO     | [data] control thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:42,736 | INFO     | [job] control thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:43,223 | INFO     | [payload] failed_post thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:43,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:43,574 | INFO     | [data] copytool_out thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:43,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 20:03:11] 2025-11-25 04:02:43,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:03:11] 2025-11-25 04:02:44,768 | INFO     | [job] queue monitor thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:47,734 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 20:03:11] 2025-11-25 04:02:47,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066995758912)>', '<ExcThread(monitor, started 140065795733248)>']
[2025-11-24 20:03:11] 2025-11-25 04:02:52,933 | INFO     | all workflow threads have been joined
[2025-11-24 20:03:11] 2025-11-25 04:02:52,934 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 20:03:11] 2025-11-25 04:02:52,934 | INFO     | traces error code: 0
[2025-11-24 20:03:11] 2025-11-25 04:02:52,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 20:03:11] 2025-11-25 04:03:11,062 | INFO     | PID=3268820 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 20:03:11] 2025-11-25 04:03:11,063 | INFO     | .. there are 26 such processes running
[2025-11-24 20:03:11] 2025-11-25 04:03:11,063 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 20:03:11] 2025-11-25 04:03:11,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 20:03:11] 2025-11-25 04:03:11,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 20:03:11] 2025-11-25 04:03:11,064 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 20:03:11] 2025-11-25 04:03:11,064 | INFO     | [monitor] control thread has ended
[2025-11-24 20:03:11] 2025-11-25 04:03:11,216 [wrapper] ==== pilot stdout END ====
[2025-11-24 20:03:11] 2025-11-25 04:03:11,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 20:03:11] 2025-11-25 04:03:11,219 [wrapper] pilotpid: 3268820
[2025-11-24 20:03:11] 2025-11-25 04:03:11,221 [wrapper] Pilot exit status: 0
[2025-11-24 20:03:11] 2025-11-25 04:03:11,236 [wrapper] pandaids: 6895882691
[2025-11-24 20:03:11] 2025-11-25 04:03:11,274 [wrapper] cleanup supervisor_pilot 3268826 3268821
[2025-11-24 20:03:11] 2025-11-25 04:03:11,276 [wrapper] Test setup, not cleaning
[2025-11-24 20:03:11] 2025-11-25 04:03:11,282 [wrapper] apfmon messages muted
[2025-11-24 20:03:11] 2025-11-25 04:03:11,284 [wrapper] ==== wrapper stdout END ====
[2025-11-24 20:03:11] 2025-11-25 04:03:11,286 [wrapper] ==== wrapper stderr END ====
[2025-11-24 20:03:11]  *** Error codes and diagnostics ***
[2025-11-24 20:03:11]     "exeErrorCode": 65,
[2025-11-24 20:03:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 20:03:11]     "pilotErrorCode": 1305,
[2025-11-24 20:03:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 20:03:11]  *** Listing of results directory ***
[2025-11-24 20:03:11] total 406216
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc    576529 Nov 24 08:06 pilot3.tar.gz
[2025-11-24 20:03:11] -rwx------. 1 boinc boinc     36292 Nov 24 08:37 runpilot2-wrapper.sh
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc      5112 Nov 24 08:37 queuedata.json
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc       100 Nov 24 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 20:03:11] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 19:57 run_atlas
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc       105 Nov 24 19:57 job.xml
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc      6443 Nov 24 19:57 init_data.xml
[2025-11-24 20:03:11] -rw-r--r--. 2 boinc boinc 411749681 Nov 24 19:57 EVNT.47483658._001387.pool.root.1
[2025-11-24 20:03:11] drwxrwx--x. 2 boinc boinc      4096 Nov 24 19:57 shared
[2025-11-24 20:03:11] -rw-r--r--. 2 boinc boinc    590102 Nov 24 19:57 input.tar.gz
[2025-11-24 20:03:11] -rw-r--r--. 2 boinc boinc     15847 Nov 24 19:57 start_atlas.sh
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc         0 Nov 24 19:57 boinc_lockfile
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc      2785 Nov 24 19:57 pandaJob.out
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc    991801 Nov 24 19:57 agis_schedconf.cvmfs.json
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc   1516227 Nov 24 19:57 agis_ddmendpoints.agis.ALL.json
[2025-11-24 20:03:11] drwx------. 5 boinc boinc      4096 Nov 24 19:57 pilot3
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc       524 Nov 24 19:59 boinc_task_state.xml
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc      1012 Nov 24 20:00 memory_monitor_summary.json
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc     49391 Nov 24 20:00 log.47556149._003737.job.log.tgz.1
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc     10335 Nov 24 20:02 heartbeat.json
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc      8192 Nov 24 20:03 boinc_mmap_file
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc        23 Nov 24 20:03 wrapper_checkpoint.txt
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc       823 Nov 24 20:03 pilotlog.txt
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc        95 Nov 24 20:03 pilot_heartbeat.json
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc    105168 Nov 24 20:03 log.47556149._003737.job.log.1
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc       186 Nov 24 20:03 output.list
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc       620 Nov 24 20:03 runtime_log
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc    174080 Nov 24 20:03 result.tar.gz
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc      8634 Nov 24 20:03 runtime_log.err
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc       645 Nov 24 20:03 GZwLDm4joh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmalLKDmgDxbCn.diag
[2025-11-24 20:03:11] -rw-r--r--. 1 boinc boinc     22552 Nov 24 20:03 stderr.txt
[2025-11-24 20:03:11] No HITS result produced
[2025-11-24 20:03:11]  *** Contents of shared directory: ***
[2025-11-24 20:03:11] total 402868
[2025-11-24 20:03:11] -rw-r--r--. 2 boinc boinc 411749681 Nov 24 19:57 ATLAS.root_0
[2025-11-24 20:03:11] -rw-r--r--. 2 boinc boinc    590102 Nov 24 19:57 input.tar.gz
[2025-11-24 20:03:11] -rw-r--r--. 2 boinc boinc     15847 Nov 24 19:57 start_atlas.sh
[2025-11-24 20:03:11] -rw-------. 1 boinc boinc    174080 Nov 24 20:03 result.tar.gz
20:03:13 (3265137): run_atlas exited; CPU time 53.954187
20:03:13 (3265137): called boinc_finish(0)

</stderr_txt>
]]>

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