Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:43:32 (17473): wrapper (7.7.26015): starting
22:43:32 (17473): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:43:32] Arguments: --nthreads 8
[2025-11-24 22:43:32] Threads: 8
[2025-11-24 22:43:32] Checking for CVMFS
[2025-11-24 22:43:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:43:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:43:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:43:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:43:32] 2.11.2.0 2989 71337 83708 153268 2 82 14944906 20275201 1 130560 0 20303860 99.886 3703920 29325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 22:43:32] CVMFS is ok
[2025-11-24 22:43:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:43:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:43:32] Further information can be found at the LHC@home message board.
[2025-11-24 22:43:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:43:32] Checking for apptainer binary...
[2025-11-24 22:43:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:43:32] Running /usr/bin/apptainer --version
[2025-11-24 22:43:32] apptainer version 1.3.2-1.el7
[2025-11-24 22:43:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:43:34] c-204-24.aglt2.org
[2025-11-24 22:43:34] apptainer works
[2025-11-24 22:43:34] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:43:34] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:43:34] Starting ATLAS job with PandaID=6895384302
[2025-11-24 22:43:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:22:11]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:22:11] 2025-11-25 16:21:35,803 | INFO     | time since job start (45464s) is within the limit (172800.0s)
[2025-11-25 11:22:11] 2025-11-25 16:21:37,474 | INFO     | monitor loop #3348: job 0:6895384302 is in state 'finished'
[2025-11-25 11:22:11] 2025-11-25 16:21:37,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:22:11] 2025-11-25 16:21:37,808 | INFO     | time since job start (45466s) is within the limit (172800.0s)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,047 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 11:22:11] 2025-11-25 16:21:39,051 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-25 11:22:11] 2025-11-25 16:21:39,052 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895384302/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,053 | INFO     | extracted standard info from prmon json
[2025-11-25 11:22:11] 2025-11-25 16:21:39,053 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 11:22:11] 2025-11-25 16:21:39,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 11:22:11] 2025-11-25 16:21:39,065 | INFO     | fitting pss+swap vs Time
[2025-11-25 11:22:11] 2025-11-25 16:21:39,066 | INFO     | sum of square deviations: 128217733478.65224
[2025-11-25 11:22:11] 2025-11-25 16:21:39,079 | INFO     | sum of deviations: 827666524491.5713
[2025-11-25 11:22:11] 2025-11-25 16:21:39,079 | INFO     | mean x: 1764064955.5463088
[2025-11-25 11:22:11] 2025-11-25 16:21:39,079 | INFO     | mean y: 2867069.389261745
[2025-11-25 11:22:11] 2025-11-25 16:21:39,079 | INFO     | intersect: -11384461899.247402
[2025-11-25 11:22:11] 2025-11-25 16:21:39,080 | INFO     | chi2: 5.414748883417478
[2025-11-25 11:22:11] 2025-11-25 16:21:39,081 | INFO     | sum of square deviations: 125653586277.14987
[2025-11-25 11:22:11] 2025-11-25 16:21:39,092 | INFO     | sum of deviations: 1043658938320.1489
[2025-11-25 11:22:11] 2025-11-25 16:21:39,092 | INFO     | mean x: 1764064803.05
[2025-11-25 11:22:11] 2025-11-25 16:21:39,092 | INFO     | mean y: 2879909.7256756756
[2025-11-25 11:22:11] 2025-11-25 16:21:39,092 | INFO     | intersect: -14649165081.79803
[2025-11-25 11:22:11] 2025-11-25 16:21:39,093 | INFO     | chi2: 2.956773625742159
[2025-11-25 11:22:11] 2025-11-25 16:21:39,093 | INFO     | current chi2=2.956773625742159 (change=45.394076633965454 %)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,094 | INFO     | sum of square deviations: 123123858325.62794
[2025-11-25 11:22:11] 2025-11-25 16:21:39,105 | INFO     | sum of deviations: 1145373226113.5752
[2025-11-25 11:22:11] 2025-11-25 16:21:39,105 | INFO     | mean x: 1764064650.5537415
[2025-11-25 11:22:11] 2025-11-25 16:21:39,105 | INFO     | mean y: 2886034.099319728
[2025-11-25 11:22:11] 2025-11-25 16:21:39,106 | INFO     | intersect: -16407519287.458822
[2025-11-25 11:22:11] 2025-11-25 16:21:39,106 | INFO     | chi2: 2.272038381249604
[2025-11-25 11:22:11] 2025-11-25 16:21:39,107 | INFO     | current chi2=2.272038381249604 (change=23.15818967441866 %)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,107 | INFO     | right removable region: 734
[2025-11-25 11:22:11] 2025-11-25 16:21:39,108 | INFO     | sum of square deviations: 125653338007.14983
[2025-11-25 11:22:11] 2025-11-25 16:21:39,119 | INFO     | sum of deviations: 629839138532.3507
[2025-11-25 11:22:11] 2025-11-25 16:21:39,119 | INFO     | mean x: 1764065108.05
[2025-11-25 11:22:11] 2025-11-25 16:21:39,119 | INFO     | mean y: 2878814.8824324324
[2025-11-25 11:22:11] 2025-11-25 16:21:39,119 | INFO     | intersect: -8839522553.762215
[2025-11-25 11:22:11] 2025-11-25 16:21:39,120 | INFO     | chi2: 3.3023047474680336
[2025-11-25 11:22:11] 2025-11-25 16:21:39,120 | INFO     | current chi2=3.3023047474680336 (change=39.01278122829939 %)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,121 | INFO     | sum of square deviations: 123123406803.73328
[2025-11-25 11:22:11] 2025-11-25 16:21:39,132 | INFO     | sum of deviations: 586138557557.0659
[2025-11-25 11:22:11] 2025-11-25 16:21:39,132 | INFO     | mean x: 1764065260.552381
[2025-11-25 11:22:11] 2025-11-25 16:21:39,132 | INFO     | mean y: 2881447.933333333
[2025-11-25 11:22:11] 2025-11-25 16:21:39,132 | INFO     | intersect: -8395088475.892315
[2025-11-25 11:22:11] 2025-11-25 16:21:39,133 | INFO     | chi2: 3.258902593825387
[2025-11-25 11:22:11] 2025-11-25 16:21:39,133 | INFO     | current chi2=3.258902593825387 (change=1.3142988597864613 %)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,133 | INFO     | left removable region: 20
[2025-11-25 11:22:11] 2025-11-25 16:21:39,134 | INFO     | sum of square deviations: 112868883549.2887
[2025-11-25 11:22:11] 2025-11-25 16:21:39,145 | INFO     | sum of deviations: 853956808864.5692
[2025-11-25 11:22:11] 2025-11-25 16:21:39,145 | INFO     | mean x: 1764065230.0616248
[2025-11-25 11:22:11] 2025-11-25 16:21:39,145 | INFO     | mean y: 2904137.5098039214
[2025-11-25 11:22:11] 2025-11-25 16:21:39,145 | INFO     | intersect: -13343870164.856022
[2025-11-25 11:22:11] 2025-11-25 16:21:39,146 | INFO     | chi2: 0.0894794793075369
[2025-11-25 11:22:11] 2025-11-25 16:21:39,146 | INFO     | current memory leak: 7.57 B/s (using 714 data points, chi2=0.09)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,146 | INFO     | could have reported an average CPU frequency of 2175 MHz (28 samples)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | ..............................
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | . Timing measurements:
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | . get job = 0 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | . initial setup = 2 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | . payload setup = 8 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | . stage-in = 0 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | . payload execution = 45423 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,147 | INFO     | . stage-out = 3 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,148 | INFO     | . log creation = 0 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,148 | INFO     | ..............................
[2025-11-25 11:22:11] 2025-11-25 16:21:39,236 | INFO     | 
[2025-11-25 11:22:11] 2025-11-25 16:21:39,236 | INFO     | job summary report
[2025-11-25 11:22:11] 2025-11-25 16:21:39,236 | INFO     | --------------------------------------------------
[2025-11-25 11:22:11] 2025-11-25 16:21:39,236 | INFO     | PanDA job id: 6895384302
[2025-11-25 11:22:11] 2025-11-25 16:21:39,236 | INFO     | task id: 47556149
[2025-11-25 11:22:11] 2025-11-25 16:21:39,237 | INFO     | errors: (none)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:22:11] 2025-11-25 16:21:39,237 | INFO     | pilot state: finished 
[2025-11-25 11:22:11] 2025-11-25 16:21:39,237 | INFO     | transexitcode: 0
[2025-11-25 11:22:11] 2025-11-25 16:21:39,237 | INFO     | exeerrorcode: 0
[2025-11-25 11:22:11] 2025-11-25 16:21:39,238 | INFO     | exeerrordiag: 
[2025-11-25 11:22:11] 2025-11-25 16:21:39,238 | INFO     | exitcode: 0
[2025-11-25 11:22:11] 2025-11-25 16:21:39,238 | INFO     | exitmsg: OK
[2025-11-25 11:22:11] 2025-11-25 16:21:39,238 | INFO     | cpuconsumptiontime: 351432 s
[2025-11-25 11:22:11] 2025-11-25 16:21:39,238 | INFO     | nevents: 1000
[2025-11-25 11:22:11] 2025-11-25 16:21:39,238 | INFO     | neventsw: 0
[2025-11-25 11:22:11] 2025-11-25 16:21:39,239 | INFO     | pid: 27731
[2025-11-25 11:22:11] 2025-11-25 16:21:39,239 | INFO     | pgrp: 27731
[2025-11-25 11:22:11] 2025-11-25 16:21:39,239 | INFO     | corecount: 8
[2025-11-25 11:22:11] 2025-11-25 16:21:39,239 | INFO     | event service: False
[2025-11-25 11:22:11] 2025-11-25 16:21:39,239 | INFO     | sizes: {0: 2284309, 1: 2284309, 6: 2284599, 11: 2284627, 45436: 2330721, 45440: 2339720, 45443: 2339904, 45450: 2340150}
[2025-11-25 11:22:11] 2025-11-25 16:21:39,239 | INFO     | --------------------------------------------------
[2025-11-25 11:22:11] 2025-11-25 16:21:39,240 | INFO     | 
[2025-11-25 11:22:11] 2025-11-25 16:21:39,240 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 11:22:11] 2025-11-25 16:21:39,270 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,271 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,271 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,271 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:22:11] 2025-11-25 16:21:39,273 | INFO     | job 6895384302 has completed (purged errors)
[2025-11-25 11:22:11] 2025-11-25 16:21:39,274 | INFO     | overall cleanup function is called
[2025-11-25 11:22:11] 2025-11-25 16:21:40,289 | INFO     | --- collectZombieJob: --- 10, [27731]
[2025-11-25 11:22:11] 2025-11-25 16:21:40,289 | INFO     | zombie collector waiting for pid 27731
[2025-11-25 11:22:11] 2025-11-25 16:21:40,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:22:11] 2025-11-25 16:21:40,290 | INFO     | collected zombie processes
[2025-11-25 11:22:11] 2025-11-25 16:21:40,290 | INFO     | will attempt to kill all subprocesses of pid=27731
[2025-11-25 11:22:11] 2025-11-25 16:21:40,379 | INFO     | process IDs to be killed: [27731] (in reverse order)
[2025-11-25 11:22:11] 2025-11-25 16:21:40,435 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:22:11] 2025-11-25 16:21:40,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:22:11] 2025-11-25 16:21:40,440 | INFO     | did not find any defunct processes belonging to 27731
[2025-11-25 11:22:11] 2025-11-25 16:21:40,443 | INFO     | did not find any defunct processes belonging to 27731
[2025-11-25 11:22:11] 2025-11-25 16:21:40,446 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:22:11] 2025-11-25 16:21:40,446 | INFO     | ready for new job
[2025-11-25 11:22:11] 2025-11-25 16:21:40,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:22:11] 2025-11-25 16:21:40,450 | INFO     | ***************************************
[2025-11-25 11:22:11] 2025-11-25 16:21:40,450 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:22:11] 2025-11-25 16:21:40,450 | INFO     | ***************************************
[2025-11-25 11:22:11] 2025-11-25 16:21:40,450 | INFO     | 
[2025-11-25 11:22:11] 2025-11-25 16:21:40,451 | INFO     | architecture information:
[2025-11-25 11:22:11] 2025-11-25 16:21:40,452 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:22:11] 2025-11-25 16:21:40,470 | INFO     | cat /etc/os-release:
[2025-11-25 11:22:11] NAME="CentOS Linux"
[2025-11-25 11:22:11] VERSION="7 (Core)"
[2025-11-25 11:22:11] ID="centos"
[2025-11-25 11:22:11] ID_LIKE="rhel fedora"
[2025-11-25 11:22:11] VERSION_ID="7"
[2025-11-25 11:22:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:22:11] ANSI_COLOR="0;31"
[2025-11-25 11:22:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:22:11] HOME_URL="https://www.centos.org/"
[2025-11-25 11:22:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:22:11] 
[2025-11-25 11:22:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:22:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:22:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:22:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:22:11] 
[2025-11-25 11:22:11] 2025-11-25 16:21:40,471 | INFO     | ***************************************
[2025-11-25 11:22:11] 2025-11-25 16:21:40,974 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 11:22:11] 2025-11-25 16:21:40,996 | INFO     | sufficient remaining disk space (17594056704 B)
[2025-11-25 11:22:11] 2025-11-25 16:21:40,996 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:22:11] 2025-11-25 16:21:40,997 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:22:11] 2025-11-25 16:21:40,997 | INFO     | update_server=False
[2025-11-25 11:22:11] 2025-11-25 16:21:40,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:22:11] 2025-11-25 16:21:40,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:22:11] 2025-11-25 16:21:40,998 | INFO     | aborting loop
[2025-11-25 11:22:11] 2025-11-25 16:21:40,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:22:11] 2025-11-25 16:21:41,288 | INFO     | all data control threads have been joined
[2025-11-25 11:22:11] 2025-11-25 16:21:42,002 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:42,003 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:42,004 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:42,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:22:11] 2025-11-25 16:21:42,061 | INFO     | [job] validate thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:42,156 | INFO     | all job control threads have been joined
[2025-11-25 11:22:11] 2025-11-25 16:21:42,198 | INFO     | all payload control threads have been joined
[2025-11-25 11:22:11] 2025-11-25 16:21:42,231 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:42,294 | INFO     | [data] control thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:42,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:22:11] 2025-11-25 16:21:43,050 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:43,162 | INFO     | [job] control thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:43,196 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:43,196 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:43,204 | INFO     | [payload] control thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:43,391 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:43,448 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:43,486 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:44,360 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:21:46,048 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:22:11] 2025-11-25 16:22:06,431 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:22:11] 2025-11-25 16:22:06,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618628224832)>', '<ExcThread(monitor, started 140617891964672)>']
[2025-11-25 11:22:11] 2025-11-25 16:22:11,022 | INFO     | PID=21216 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 11:22:11] 2025-11-25 16:22:11,023 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:22:11] 2025-11-25 16:22:11,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:22:11] 2025-11-25 16:22:11,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:22:11] 2025-11-25 16:22:11,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:22:11] 2025-11-25 16:22:11,024 | INFO     | [monitor] control thread has ended
[2025-11-25 11:22:11] 2025-11-25 16:22:11,527 | INFO     | all workflow threads have been joined
[2025-11-25 11:22:11] 2025-11-25 16:22:11,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:22:11] 2025-11-25 16:22:11,532 | INFO     | traces error code: 0
[2025-11-25 11:22:11] 2025-11-25 16:22:11,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:22:11] 2025-11-25 16:22:11,646 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:22:11] 2025-11-25 16:22:11,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:22:11] 2025-11-25 16:22:11,655 [wrapper] pilotpid: 21216
[2025-11-25 11:22:11] 2025-11-25 16:22:11,660 [wrapper] Pilot exit status: 0
[2025-11-25 11:22:11] 2025-11-25 16:22:11,678 [wrapper] pandaids: 6895384302
[2025-11-25 11:22:11] 2025-11-25 16:22:11,724 [wrapper] cleanup supervisor_pilot 21185 21217
[2025-11-25 11:22:11] 2025-11-25 16:22:11,729 [wrapper] Test setup, not cleaning
[2025-11-25 11:22:11] 2025-11-25 16:22:11,734 [wrapper] apfmon messages muted
[2025-11-25 11:22:11] 2025-11-25 16:22:11,739 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:22:11] 2025-11-25 16:22:11,744 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:22:11]  *** Error codes and diagnostics ***
[2025-11-25 11:22:11]     "exeErrorCode": 0,
[2025-11-25 11:22:11]     "exeErrorDiag": "",
[2025-11-25 11:22:11]     "pilotErrorCode": 0,
[2025-11-25 11:22:11]     "pilotErrorDiag": "",
[2025-11-25 11:22:11]  *** Listing of results directory ***
[2025-11-25 11:22:11] total 1317172
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 23:40 pilot3.tar.gz
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 23:49 queuedata.json
[2025-11-25 11:22:11] -rwx------ 1 boincer umatlas     36292 Nov 23 23:49 runpilot2-wrapper.sh
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas       100 Nov 24 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:22:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 22:43 run_atlas
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas       105 Nov 24 22:43 job.xml
[2025-11-25 11:22:11] -rw-r--r-- 2 boincer umatlas 410167647 Nov 24 22:43 EVNT.47483658._001221.pool.root.1
[2025-11-25 11:22:11] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 22:43 input.tar.gz
[2025-11-25 11:22:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 22:43 start_atlas.sh
[2025-11-25 11:22:11] drwxrwx--x 2 boincer umatlas      4096 Nov 24 22:43 shared
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas         0 Nov 24 22:43 boinc_lockfile
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 22:43 pandaJob.out
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas        57 Nov 24 22:43 setup.sh.local
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas    991801 Nov 24 22:43 agis_schedconf.cvmfs.json
[2025-11-25 11:22:11] drwx------ 5 boincer umatlas      4096 Nov 24 22:43 pilot3
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas       533 Nov 25 11:10 boinc_task_state.xml
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas 918195250 Nov 25 11:20 HITS.47556149._002072.pool.root.1
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 11:20 init_data.xml
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas      1062 Nov 25 11:21 memory_monitor_summary.json
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas   1516240 Nov 25 11:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas   1989378 Nov 25 11:21 log.47556149._002072.job.log.tgz.1
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas      8661 Nov 25 11:21 heartbeat.json
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 11:21 boinc_mmap_file
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas        29 Nov 25 11:21 wrapper_checkpoint.txt
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas        95 Nov 25 11:22 pilot_heartbeat.json
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas      4746 Nov 25 11:22 pilotlog.txt
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas   6260033 Nov 25 11:22 log.47556149._002072.job.log.1
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas       353 Nov 25 11:22 output.list
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas       620 Nov 25 11:22 runtime_log
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas   8273920 Nov 25 11:22 result.tar.gz
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas       668 Nov 25 11:22 SiKMDmBhdh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmruIKDmoCmx5m.diag
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 11:22 runtime_log.err
[2025-11-25 11:22:11] -rw-r--r-- 1 boincer umatlas     21304 Nov 25 11:22 stderr.txt
[2025-11-25 11:22:11] HITS file was successfully produced:
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas 918195250 Nov 25 11:20 shared/HITS.pool.root.1
[2025-11-25 11:22:11]  *** Contents of shared directory: ***
[2025-11-25 11:22:11] total 1305912
[2025-11-25 11:22:11] -rw-r--r-- 2 boincer umatlas 410167647 Nov 24 22:43 ATLAS.root_0
[2025-11-25 11:22:11] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 22:43 input.tar.gz
[2025-11-25 11:22:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 22:43 start_atlas.sh
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas 918195250 Nov 25 11:20 HITS.pool.root.1
[2025-11-25 11:22:11] -rw------- 1 boincer umatlas   8273920 Nov 25 11:22 result.tar.gz
11:22:13 (17473): run_atlas exited; CPU time 347589.888464
11:22:13 (17473): called boinc_finish(0)

</stderr_txt>
]]>

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