Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:41:30 (1771556): wrapper (7.7.26015): starting
16:41:30 (1771556): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 16:41:30] Arguments: --nthreads 3
[2025-11-27 16:41:30] Threads: 3
[2025-11-27 16:41:30] Checking for CVMFS
[2025-11-27 16:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 16:41:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 16:41:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 16:41:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 16:41:30] 2.9.2.0 28796 12906 99828 153371 0 81 31094567 36864001 0 130560 1 4837796 99.943 635560 818 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 16:41:30] CVMFS is ok
[2025-11-27 16:41:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 16:41:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 16:41:30] Further information can be found at the LHC@home message board.
[2025-11-27 16:41:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 16:41:30] Checking for apptainer binary...
[2025-11-27 16:41:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 16:41:30] Running /usr/bin/apptainer --version
[2025-11-27 16:41:30] apptainer version 1.4.1-1.1
[2025-11-27 16:41:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 16:41:30] thA331b
[2025-11-27 16:41:30] apptainer works
[2025-11-27 16:41:30] Set ATHENA_PROC_NUMBER=3
[2025-11-27 16:41:30] Set ATHENA_CORE_NUMBER=3
[2025-11-27 16:41:30] Starting ATLAS job with PandaID=6895355105
[2025-11-27 16:41:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:23:39]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:23:39] 2025-11-27 23:23:01,678 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:23:39] 2025-11-27 23:23:01,678 | INFO     | ***************************************
[2025-11-28 00:23:39] 2025-11-27 23:23:01,678 | INFO     | 
[2025-11-28 00:23:39] 2025-11-27 23:23:01,678 | INFO     | architecture information:
[2025-11-28 00:23:39] 2025-11-27 23:23:01,678 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:23:39] 2025-11-27 23:23:01,687 | INFO     | cat /etc/os-release:
[2025-11-28 00:23:39] NAME="CentOS Linux"
[2025-11-28 00:23:39] VERSION="7 (Core)"
[2025-11-28 00:23:39] ID="centos"
[2025-11-28 00:23:39] ID_LIKE="rhel fedora"
[2025-11-28 00:23:39] VERSION_ID="7"
[2025-11-28 00:23:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:23:39] ANSI_COLOR="0;31"
[2025-11-28 00:23:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:23:39] HOME_URL="https://www.centos.org/"
[2025-11-28 00:23:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:23:39] 
[2025-11-28 00:23:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:23:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:23:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:23:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:23:39] 
[2025-11-28 00:23:39] 2025-11-27 23:23:01,687 | INFO     | ***************************************
[2025-11-28 00:23:39] 2025-11-27 23:23:02,190 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 00:23:39] 2025-11-27 23:23:02,203 | INFO     | sufficient remaining disk space (225664040960 B)
[2025-11-28 00:23:39] 2025-11-27 23:23:02,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:23:39] 2025-11-27 23:23:02,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | INFO     | update_server=False
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:23:39] 2025-11-27 23:23:02,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:23:39] 2025-11-27 23:23:02,348 | INFO     | all data control threads have been joined
[2025-11-28 00:23:39] 2025-11-27 23:23:02,658 | INFO     | all payload control threads have been joined
[2025-11-28 00:23:39] 2025-11-27 23:23:03,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:23:39] 2025-11-27 23:23:03,151 | INFO     | aborting loop
[2025-11-28 00:23:39] 2025-11-27 23:23:03,209 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,209 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,232 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,354 | INFO     | [data] control thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,379 | INFO     | all job control threads have been joined
[2025-11-28 00:23:39] 2025-11-27 23:23:03,622 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:23:39] 2025-11-27 23:23:03,663 | INFO     | [payload] control thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,784 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,790 | INFO     | [job] validate thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,824 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:03,868 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:04,157 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:04,210 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:04,294 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:04,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:04,384 | INFO     | [job] control thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:07,656 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:23:39] 2025-11-27 23:23:07,749 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:23:39] 2025-11-27 23:23:09,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827775227712)>', '<ExcThread(monitor, started 139827156612864)>']
[2025-11-28 00:23:39] 2025-11-27 23:23:09,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:23:39] 2025-11-27 23:23:09,242 | INFO     | [monitor] control thread has ended
[2025-11-28 00:23:39] 2025-11-27 23:23:14,215 | INFO     | all workflow threads have been joined
[2025-11-28 00:23:39] 2025-11-27 23:23:14,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:23:39] 2025-11-27 23:23:14,216 | INFO     | traces error code: 0
[2025-11-28 00:23:39] 2025-11-27 23:23:14,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:23:39] 2025-11-27 23:23:14,268 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:23:39] 2025-11-27 23:23:14,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:23:39] 2025-11-27 23:23:14,273 [wrapper] pilotpid: 1775277
[2025-11-28 00:23:39] 2025-11-27 23:23:14,275 [wrapper] Pilot exit status: 0
[2025-11-28 00:23:39] 2025-11-27 23:23:14,282 [wrapper] pandaids: 6895355105
[2025-11-28 00:23:39] 2025-11-27 23:23:14,297 [wrapper] cleanup supervisor_pilot 1828716 1775278
[2025-11-28 00:23:39] 2025-11-27 23:23:14,300 [wrapper] Test setup, not cleaning
[2025-11-28 00:23:39] 2025-11-27 23:23:14,302 [wrapper] apfmon messages muted
[2025-11-28 00:23:39] 2025-11-27 23:23:14,304 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:23:39] 2025-11-27 23:23:14,307 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:23:39]  *** Error codes and diagnostics ***
[2025-11-28 00:23:39]     "exeErrorCode": 0,
[2025-11-28 00:23:39]     "exeErrorDiag": "",
[2025-11-28 00:23:39]     "pilotErrorCode": 0,
[2025-11-28 00:23:39]     "pilotErrorDiag": "",
[2025-11-28 00:23:39]  *** Listing of results directory ***
[2025-11-28 00:23:39] total 1292392
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc    576529 Nov 23 06:47 pilot3.tar.gz
[2025-11-28 00:23:39] -rwx------ 1 boinc boinc     36292 Nov 23 06:58 runpilot2-wrapper.sh
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc      5112 Nov 23 06:58 queuedata.json
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc       100 Nov 27 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:23:39] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 16:41 run_atlas
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc       105 Nov 27 16:41 job.xml
[2025-11-28 00:23:39] -rw-r--r-- 2 boinc boinc 408887793 Nov 27 16:41 EVNT.47483658._000643.pool.root.1
[2025-11-28 00:23:39] -rw-r--r-- 2 boinc boinc    590097 Nov 27 16:41 input.tar.gz
[2025-11-28 00:23:39] -rw-r--r-- 2 boinc boinc     15847 Nov 27 16:41 start_atlas.sh
[2025-11-28 00:23:39] drwxrwx--x 2 boinc boinc      4096 Nov 27 16:41 shared
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc         0 Nov 27 16:41 boinc_setup_complete
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc      6442 Nov 27 16:41 init_data.xml
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc         0 Nov 27 16:41 boinc_lockfile
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc      2786 Nov 27 16:41 pandaJob.out
[2025-11-28 00:23:39] -rw------- 1 boinc boinc    991572 Nov 27 16:41 agis_schedconf.cvmfs.json
[2025-11-28 00:23:39] drwx------ 5 boinc boinc      4096 Nov 27 16:41 pilot3
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc       531 Nov 28 00:20 boinc_task_state.xml
[2025-11-28 00:23:39] -rw------- 1 boinc boinc 900501246 Nov 28 00:22 HITS.47556137._006390.pool.root.1
[2025-11-28 00:23:39] -rw------- 1 boinc boinc        95 Nov 28 00:22 pilot_heartbeat.json
[2025-11-28 00:23:39] -rw------- 1 boinc boinc      1026 Nov 28 00:22 memory_monitor_summary.json
[2025-11-28 00:23:39] -rw------- 1 boinc boinc   1516240 Nov 28 00:22 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:23:39] -rw------- 1 boinc boinc   1154545 Nov 28 00:22 log.47556137._006390.job.log.tgz.1
[2025-11-28 00:23:39] -rw------- 1 boinc boinc      8567 Nov 28 00:23 heartbeat.json
[2025-11-28 00:23:39] -rw------- 1 boinc boinc      4556 Nov 28 00:23 pilotlog.txt
[2025-11-28 00:23:39] -rw------- 1 boinc boinc   3900345 Nov 28 00:23 log.47556137._006390.job.log.1
[2025-11-28 00:23:39] -rw------- 1 boinc boinc       353 Nov 28 00:23 output.list
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc       620 Nov 28 00:23 runtime_log
[2025-11-28 00:23:39] -rw------- 1 boinc boinc   5079040 Nov 28 00:23 result.tar.gz
[2025-11-28 00:23:39] -rw------- 1 boinc boinc       666 Nov 28 00:23 ubKNDmNIIh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzgKKDm5ZqfQo.diag
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc      8903 Nov 28 00:23 runtime_log.err
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc      8192 Nov 28 00:23 boinc_mmap_file
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc        28 Nov 28 00:23 wrapper_checkpoint.txt
[2025-11-28 00:23:39] -rw-r--r-- 1 boinc boinc      9149 Nov 28 00:23 stderr.txt
[2025-11-28 00:23:39] HITS file was successfully produced:
[2025-11-28 00:23:39] -rw------- 1 boinc boinc 900501246 Nov 28 00:22 shared/HITS.pool.root.1
[2025-11-28 00:23:39]  *** Contents of shared directory: ***
[2025-11-28 00:23:40] total 1284268
[2025-11-28 00:23:40] -rw-r--r-- 2 boinc boinc 408887793 Nov 27 16:41 ATLAS.root_0
[2025-11-28 00:23:40] -rw-r--r-- 2 boinc boinc    590097 Nov 27 16:41 input.tar.gz
[2025-11-28 00:23:40] -rw-r--r-- 2 boinc boinc     15847 Nov 27 16:41 start_atlas.sh
[2025-11-28 00:23:40] -rw------- 1 boinc boinc 900501246 Nov 28 00:22 HITS.pool.root.1
[2025-11-28 00:23:40] -rw------- 1 boinc boinc   5079040 Nov 28 00:23 result.tar.gz
00:23:41 (1771556): run_atlas exited; CPU time 81754.294836
00:23:41 (1771556): called boinc_finish(0)

</stderr_txt>
]]>

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