Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:22:09 (12631): wrapper (7.7.26015): starting
23:22:09 (12631): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:22:09] Arguments: --nthreads 8
[2025-11-24 23:22:09] Threads: 8
[2025-11-24 23:22:09] Checking for CVMFS
[2025-11-24 23:22:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:22:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:22:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:22:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:22:09] 2.11.2.0 3838 140538 131440 153270 3 72 12893428 18432001 1885 130560 0 115805239 99.988 4993587 27094 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 23:22:09] CVMFS is ok
[2025-11-24 23:22:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:22:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:22:09] Further information can be found at the LHC@home message board.
[2025-11-24 23:22:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:22:09] Checking for apptainer binary...
[2025-11-24 23:22:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:22:09] Running /usr/bin/apptainer --version
[2025-11-24 23:22:09] apptainer version 1.3.2-1.el7
[2025-11-24 23:22:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:22:10] c-206-4.aglt2.org
[2025-11-24 23:22:10] apptainer works
[2025-11-24 23:22:10] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:22:10] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:22:10] Starting ATLAS job with PandaID=6893861515
[2025-11-24 23:22:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:49:22]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:49:22] 2025-11-25 23:48:33,918 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:49:22] 2025-11-25 23:48:33,920 | INFO     | sum of square deviations: 467915795289.44385
[2025-11-25 18:49:22] 2025-11-25 23:48:33,959 | INFO     | sum of deviations: 2053897391291.1702
[2025-11-25 18:49:22] 2025-11-25 23:48:33,960 | INFO     | mean x: 1764079522.6155188
[2025-11-25 18:49:22] 2025-11-25 23:48:33,960 | INFO     | mean y: 2888217.889276373
[2025-11-25 18:49:22] 2025-11-25 23:48:33,960 | INFO     | intersect: -7740467244.793747
[2025-11-25 18:49:22] 2025-11-25 23:48:33,961 | INFO     | chi2: 6.472528045869678
[2025-11-25 18:49:22] 2025-11-25 23:48:33,962 | INFO     | sum of square deviations: 461823421965.0397
[2025-11-25 18:49:22] 2025-11-25 23:48:33,994 | INFO     | sum of deviations: 2406428841957.583
[2025-11-25 18:49:22] 2025-11-25 23:48:33,994 | INFO     | mean x: 1764079370.1182137
[2025-11-25 18:49:22] 2025-11-25 23:48:33,994 | INFO     | mean y: 2897037.46234676
[2025-11-25 18:49:22] 2025-11-25 23:48:33,994 | INFO     | intersect: -9189212487.195314
[2025-11-25 18:49:22] 2025-11-25 23:48:33,996 | INFO     | chi2: 3.726998974252009
[2025-11-25 18:49:22] 2025-11-25 23:48:33,996 | INFO     | current chi2=3.726998974252009 (change=42.41818733206845 %)
[2025-11-25 18:49:22] 2025-11-25 23:48:33,998 | INFO     | sum of square deviations: 455784165915.62134
[2025-11-25 18:49:22] 2025-11-25 23:48:34,026 | INFO     | sum of deviations: 2607637223043.5913
[2025-11-25 18:49:22] 2025-11-25 23:48:34,027 | INFO     | mean x: 1764079217.6209323
[2025-11-25 18:49:22] 2025-11-25 23:48:34,027 | INFO     | mean y: 2902118.210202287
[2025-11-25 18:49:22] 2025-11-25 23:48:34,027 | INFO     | intersect: -10089766684.851212
[2025-11-25 18:49:22] 2025-11-25 23:48:34,028 | INFO     | chi2: 2.767110705105199
[2025-11-25 18:49:22] 2025-11-25 23:48:34,028 | INFO     | current chi2=2.767110705105199 (change=25.75499150330341 %)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,030 | INFO     | sum of square deviations: 449797794578.6852
[2025-11-25 18:49:22] 2025-11-25 23:48:34,056 | INFO     | sum of deviations: 2724974076681.8345
[2025-11-25 18:49:22] 2025-11-25 23:48:34,057 | INFO     | mean x: 1764079065.1236749
[2025-11-25 18:49:22] 2025-11-25 23:48:34,057 | INFO     | mean y: 2905104.386925795
[2025-11-25 18:49:22] 2025-11-25 23:48:34,057 | INFO     | intersect: -10684274289.593443
[2025-11-25 18:49:22] 2025-11-25 23:48:34,058 | INFO     | chi2: 2.3266184168519306
[2025-11-25 18:49:22] 2025-11-25 23:48:34,058 | INFO     | current chi2=2.3266184168519306 (change=15.918853099754163 %)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,058 | INFO     | right removable region: 1131
[2025-11-25 18:49:22] 2025-11-25 23:48:34,059 | INFO     | sum of square deviations: 461823061028.27686
[2025-11-25 18:49:22] 2025-11-25 23:48:34,096 | INFO     | sum of deviations: 1752934049458.7263
[2025-11-25 18:49:22] 2025-11-25 23:48:34,097 | INFO     | mean x: 1764079675.117338
[2025-11-25 18:49:22] 2025-11-25 23:48:34,097 | INFO     | mean y: 2895742.554290718
[2025-11-25 18:49:22] 2025-11-25 23:48:34,097 | INFO     | intersect: -6692991902.350326
[2025-11-25 18:49:22] 2025-11-25 23:48:34,099 | INFO     | chi2: 4.4273410892230745
[2025-11-25 18:49:22] 2025-11-25 23:48:34,099 | INFO     | current chi2=4.4273410892230745 (change=31.59796206602305 %)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,101 | INFO     | sum of square deviations: 455783583366.57526
[2025-11-25 18:49:22] 2025-11-25 23:48:34,143 | INFO     | sum of deviations: 1675037007814.1875
[2025-11-25 18:49:22] 2025-11-25 23:48:34,144 | INFO     | mean x: 1764079827.6174142
[2025-11-25 18:49:22] 2025-11-25 23:48:34,144 | INFO     | mean y: 2897709.1521547935
[2025-11-25 18:49:22] 2025-11-25 23:48:34,144 | INFO     | intersect: -6480220823.050639
[2025-11-25 18:49:22] 2025-11-25 23:48:34,146 | INFO     | chi2: 4.369189460074473
[2025-11-25 18:49:22] 2025-11-25 23:48:34,146 | INFO     | current chi2=4.369189460074473 (change=1.3134662086495335 %)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,146 | INFO     | left removable region: 20
[2025-11-25 18:49:22] 2025-11-25 23:48:34,148 | INFO     | sum of square deviations: 425226388538.48444
[2025-11-25 18:49:22] 2025-11-25 23:48:34,176 | INFO     | sum of deviations: 2238939286661.974
[2025-11-25 18:49:22] 2025-11-25 23:48:34,176 | INFO     | mean x: 1764079644.6246624
[2025-11-25 18:49:22] 2025-11-25 23:48:34,177 | INFO     | mean y: 2917770.2565256525
[2025-11-25 18:49:22] 2025-11-25 23:48:34,177 | INFO     | intersect: -9285469139.892614
[2025-11-25 18:49:22] 2025-11-25 23:48:34,178 | INFO     | chi2: 0.18145024269443571
[2025-11-25 18:49:22] 2025-11-25 23:48:34,179 | INFO     | current memory leak: 5.27 B/s (using 1111 data points, chi2=0.18)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,180 | INFO     | could have reported an average CPU frequency of 2625 MHz (42 samples)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,180 | INFO     | ..............................
[2025-11-25 18:49:22] 2025-11-25 23:48:34,180 | INFO     | . Timing measurements:
[2025-11-25 18:49:22] 2025-11-25 23:48:34,181 | INFO     | . get job = 0 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,181 | INFO     | . initial setup = 2 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,181 | INFO     | . payload setup = 6 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,181 | INFO     | . stage-in = 0 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,181 | INFO     | . payload execution = 69936 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,181 | INFO     | . stage-out = 4 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,182 | INFO     | . log creation = 0 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,182 | INFO     | ..............................
[2025-11-25 18:49:22] 2025-11-25 23:48:34,499 | INFO     | 
[2025-11-25 18:49:22] 2025-11-25 23:48:34,499 | INFO     | job summary report
[2025-11-25 18:49:22] 2025-11-25 23:48:34,499 | INFO     | --------------------------------------------------
[2025-11-25 18:49:22] 2025-11-25 23:48:34,499 | INFO     | PanDA job id: 6893861515
[2025-11-25 18:49:22] 2025-11-25 23:48:34,499 | INFO     | task id: 47523449
[2025-11-25 18:49:22] 2025-11-25 23:48:34,500 | INFO     | errors: (none)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:49:22] 2025-11-25 23:48:34,500 | INFO     | pilot state: finished 
[2025-11-25 18:49:22] 2025-11-25 23:48:34,500 | INFO     | transexitcode: 0
[2025-11-25 18:49:22] 2025-11-25 23:48:34,500 | INFO     | exeerrorcode: 0
[2025-11-25 18:49:22] 2025-11-25 23:48:34,500 | INFO     | exeerrordiag: 
[2025-11-25 18:49:22] 2025-11-25 23:48:34,501 | INFO     | exitcode: 0
[2025-11-25 18:49:22] 2025-11-25 23:48:34,501 | INFO     | exitmsg: OK
[2025-11-25 18:49:22] 2025-11-25 23:48:34,501 | INFO     | cpuconsumptiontime: 536230 s
[2025-11-25 18:49:22] 2025-11-25 23:48:34,501 | INFO     | nevents: 1000
[2025-11-25 18:49:22] 2025-11-25 23:48:34,501 | INFO     | neventsw: 0
[2025-11-25 18:49:22] 2025-11-25 23:48:34,501 | INFO     | pid: 23164
[2025-11-25 18:49:22] 2025-11-25 23:48:34,502 | INFO     | pgrp: 23164
[2025-11-25 18:49:22] 2025-11-25 23:48:34,502 | INFO     | corecount: 8
[2025-11-25 18:49:22] 2025-11-25 23:48:34,502 | INFO     | event service: False
[2025-11-25 18:49:22] 2025-11-25 23:48:34,502 | INFO     | sizes: {0: 2284310, 1: 2284310, 4: 2284600, 12: 2284628, 69946: 2341173, 69950: 2350172, 69954: 2350356, 69957: 2350602}
[2025-11-25 18:49:22] 2025-11-25 23:48:34,502 | INFO     | --------------------------------------------------
[2025-11-25 18:49:22] 2025-11-25 23:48:34,502 | INFO     | 
[2025-11-25 18:49:22] 2025-11-25 23:48:34,503 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 18:49:22] 2025-11-25 23:48:34,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:49:22] 2025-11-25 23:48:34,533 | INFO     | job 6893861515 has completed (purged errors)
[2025-11-25 18:49:22] 2025-11-25 23:48:34,533 | INFO     | overall cleanup function is called
[2025-11-25 18:49:22] 2025-11-25 23:48:34,883 | INFO     | PID=16340 has CPU usage=17.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 18:49:22] 2025-11-25 23:48:34,883 | INFO     | .. there are 3 such processes running
[2025-11-25 18:49:22] 2025-11-25 23:48:35,546 | INFO     | --- collectZombieJob: --- 10, [23164]
[2025-11-25 18:49:22] 2025-11-25 23:48:35,546 | INFO     | zombie collector waiting for pid 23164
[2025-11-25 18:49:22] 2025-11-25 23:48:35,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:49:22] 2025-11-25 23:48:35,546 | INFO     | collected zombie processes
[2025-11-25 18:49:22] 2025-11-25 23:48:35,546 | INFO     | will attempt to kill all subprocesses of pid=23164
[2025-11-25 18:49:22] 2025-11-25 23:48:35,686 | INFO     | process IDs to be killed: [23164] (in reverse order)
[2025-11-25 18:49:22] 2025-11-25 23:48:35,745 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:49:22] 2025-11-25 23:48:35,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:49:22] 2025-11-25 23:48:35,752 | INFO     | did not find any defunct processes belonging to 23164
[2025-11-25 18:49:22] 2025-11-25 23:48:35,757 | INFO     | did not find any defunct processes belonging to 23164
[2025-11-25 18:49:22] 2025-11-25 23:48:35,759 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:49:22] 2025-11-25 23:48:35,759 | INFO     | ready for new job
[2025-11-25 18:49:22] 2025-11-25 23:48:35,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:49:22] 2025-11-25 23:48:35,765 | INFO     | ***************************************
[2025-11-25 18:49:22] 2025-11-25 23:48:35,765 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:49:22] 2025-11-25 23:48:35,765 | INFO     | ***************************************
[2025-11-25 18:49:22] 2025-11-25 23:48:35,765 | INFO     | 
[2025-11-25 18:49:22] 2025-11-25 23:48:35,766 | INFO     | architecture information:
[2025-11-25 18:49:22] 2025-11-25 23:48:35,767 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:49:22] 2025-11-25 23:48:35,781 | INFO     | cat /etc/os-release:
[2025-11-25 18:49:22] NAME="CentOS Linux"
[2025-11-25 18:49:22] VERSION="7 (Core)"
[2025-11-25 18:49:22] ID="centos"
[2025-11-25 18:49:22] ID_LIKE="rhel fedora"
[2025-11-25 18:49:22] VERSION_ID="7"
[2025-11-25 18:49:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:49:22] ANSI_COLOR="0;31"
[2025-11-25 18:49:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:49:22] HOME_URL="https://www.centos.org/"
[2025-11-25 18:49:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:49:22] 
[2025-11-25 18:49:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:49:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:49:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:49:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:49:22] 
[2025-11-25 18:49:22] 2025-11-25 23:48:35,781 | INFO     | ***************************************
[2025-11-25 18:49:22] 2025-11-25 23:48:36,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 18:49:22] 2025-11-25 23:48:36,294 | INFO     | sufficient remaining disk space (25797066752 B)
[2025-11-25 18:49:22] 2025-11-25 23:48:36,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:49:22] 2025-11-25 23:48:36,294 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:49:22] 2025-11-25 23:48:36,294 | INFO     | update_server=False
[2025-11-25 18:49:22] 2025-11-25 23:48:36,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:49:22] 2025-11-25 23:48:36,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:49:22] 2025-11-25 23:48:36,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:49:22] 2025-11-25 23:48:36,295 | INFO     | aborting loop
[2025-11-25 18:49:22] 2025-11-25 23:48:36,387 | INFO     | all data control threads have been joined
[2025-11-25 18:49:22] 2025-11-25 23:48:36,458 | INFO     | all job control threads have been joined
[2025-11-25 18:49:22] 2025-11-25 23:48:36,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:49:22] 2025-11-25 23:48:36,743 | INFO     | all payload control threads have been joined
[2025-11-25 18:49:22] 2025-11-25 23:48:37,301 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,302 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,302 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,360 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,392 | INFO     | [data] control thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,464 | INFO     | [job] control thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,565 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,629 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:49:22] 2025-11-25 23:48:37,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:37,749 | INFO     | [payload] control thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:38,356 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:38,478 | INFO     | [job] validate thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:38,478 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:38,552 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:39,641 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:48:40,684 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:49:22] 2025-11-25 23:49:07,089 | INFO     | PID=16340 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 18:49:22] 2025-11-25 23:49:07,089 | INFO     | .. there are 3 such processes running
[2025-11-25 18:49:22] 2025-11-25 23:49:07,089 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:49:22] 2025-11-25 23:49:07,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:49:22] 2025-11-25 23:49:07,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:49:22] 2025-11-25 23:49:17,045 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:49:22] 2025-11-25 23:49:17,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418527311680)>', '<ExcThread(monitor, started 140418075305728)>']
[2025-11-25 18:49:22] 2025-11-25 23:49:17,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:49:22] 2025-11-25 23:49:17,138 | INFO     | [monitor] control thread has ended
[2025-11-25 18:49:22] 2025-11-25 23:49:22,117 | INFO     | all workflow threads have been joined
[2025-11-25 18:49:22] 2025-11-25 23:49:22,117 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:49:22] 2025-11-25 23:49:22,117 | INFO     | traces error code: 0
[2025-11-25 18:49:22] 2025-11-25 23:49:22,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:49:22] 2025-11-25 23:49:22,252 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:49:22] 2025-11-25 23:49:22,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:49:22] 2025-11-25 23:49:22,257 [wrapper] pilotpid: 16340
[2025-11-25 18:49:22] 2025-11-25 23:49:22,259 [wrapper] Pilot exit status: 0
[2025-11-25 18:49:22] 2025-11-25 23:49:22,267 [wrapper] pandaids: 6893861515
[2025-11-25 18:49:22] 2025-11-25 23:49:22,295 [wrapper] cleanup supervisor_pilot 17399 16341
[2025-11-25 18:49:22] 2025-11-25 23:49:22,297 [wrapper] Test setup, not cleaning
[2025-11-25 18:49:22] 2025-11-25 23:49:22,300 [wrapper] apfmon messages muted
[2025-11-25 18:49:22] 2025-11-25 23:49:22,302 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:49:22] 2025-11-25 23:49:22,304 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:49:22]  *** Error codes and diagnostics ***
[2025-11-25 18:49:22]     "exeErrorCode": 0,
[2025-11-25 18:49:22]     "exeErrorDiag": "",
[2025-11-25 18:49:22]     "pilotErrorCode": 0,
[2025-11-25 18:49:22]     "pilotErrorDiag": "",
[2025-11-25 18:49:22]  *** Listing of results directory ***
[2025-11-25 18:49:22] total 1311104
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 08:50 pilot3.tar.gz
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 08:58 queuedata.json
[2025-11-25 18:49:22] -rwx------ 1 boincer umatlas     36292 Nov 20 08:59 runpilot2-wrapper.sh
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas       100 Nov 24 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:49:22] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 23:22 run_atlas
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas       105 Nov 24 23:22 job.xml
[2025-11-25 18:49:22] -rw-r--r-- 2 boincer umatlas 409047435 Nov 24 23:22 EVNT.47493127._000574.pool.root.1
[2025-11-25 18:49:22] drwxrwx--x 2 boincer umatlas      4096 Nov 24 23:22 shared
[2025-11-25 18:49:22] -rw-r--r-- 2 boincer umatlas    590106 Nov 24 23:22 input.tar.gz
[2025-11-25 18:49:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:22 start_atlas.sh
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas         0 Nov 24 23:22 boinc_lockfile
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 23:22 pandaJob.out
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas        57 Nov 24 23:22 setup.sh.local
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas    991801 Nov 24 23:22 agis_schedconf.cvmfs.json
[2025-11-25 18:49:22] drwx------ 5 boincer umatlas      4096 Nov 24 23:22 pilot3
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas       533 Nov 25 18:30 boinc_task_state.xml
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 18:45 init_data.xml
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas 905595328 Nov 25 18:47 HITS.47523449._005733.pool.root.1
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas      1068 Nov 25 18:48 memory_monitor_summary.json
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas   1516240 Nov 25 18:48 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas        95 Nov 25 18:48 pilot_heartbeat.json
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas   2317661 Nov 25 18:48 log.47523449._005733.job.log.tgz.1
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas      8660 Nov 25 18:48 heartbeat.json
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas        29 Nov 25 18:48 wrapper_checkpoint.txt
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 18:48 boinc_mmap_file
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas      4821 Nov 25 18:49 pilotlog.txt
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas   9687688 Nov 25 18:49 log.47523449._005733.job.log.1
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas       353 Nov 25 18:49 output.list
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas       620 Nov 25 18:49 runtime_log
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas  12021760 Nov 25 18:49 result.tar.gz
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas       667 Nov 25 18:49 YWCODmJNKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmr0HKDmIppVxn.diag
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 18:49 runtime_log.err
[2025-11-25 18:49:22] -rw-r--r-- 1 boincer umatlas     21215 Nov 25 18:49 stderr.txt
[2025-11-25 18:49:22] HITS file was successfully produced:
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas 905595328 Nov 25 18:47 shared/HITS.pool.root.1
[2025-11-25 18:49:22]  *** Contents of shared directory: ***
[2025-11-25 18:49:22] total 1296176
[2025-11-25 18:49:22] -rw-r--r-- 2 boincer umatlas 409047435 Nov 24 23:22 ATLAS.root_0
[2025-11-25 18:49:22] -rw-r--r-- 2 boincer umatlas    590106 Nov 24 23:22 input.tar.gz
[2025-11-25 18:49:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:22 start_atlas.sh
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas 905595328 Nov 25 18:47 HITS.pool.root.1
[2025-11-25 18:49:22] -rw------- 1 boincer umatlas  12021760 Nov 25 18:49 result.tar.gz
18:49:24 (12631): run_atlas exited; CPU time 535044.883277
18:49:24 (12631): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN