Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:45:44 (1109295): wrapper (7.7.26015): starting
19:45:44 (1109295): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 19:45:44] Arguments: --nthreads 12
[2025-11-24 19:45:44] Threads: 12
[2025-11-24 19:45:44] Checking for CVMFS
[2025-11-24 19:45:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:45:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:45:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:45:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:45:44] 2.11.5.0 1719783 26138 144416 153268 3 486 28353176 45568001 21780 130560 0 243232065 99.776 158235287 28033 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 19:45:44] CVMFS is ok
[2025-11-24 19:45:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:45:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:45:44] Further information can be found at the LHC@home message board.
[2025-11-24 19:45:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:45:44] Checking for apptainer binary...
[2025-11-24 19:45:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:45:44] Running /usr/bin/apptainer --version
[2025-11-24 19:45:44] apptainer version 1.4.1-1.el9
[2025-11-24 19:45:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:45:44] wns0060.triumf.lcg
[2025-11-24 19:45:44] apptainer works
[2025-11-24 19:45:45] Set ATHENA_PROC_NUMBER=12
[2025-11-24 19:45:45] Set ATHENA_CORE_NUMBER=12
[2025-11-24 19:45:45] Starting ATLAS job with PandaID=6895816657
[2025-11-24 19:45:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:50:05]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 19:50:05] 2025-11-25 03:49:29,778 | WARNING  | wrong length of table data, x=[1764042389.0], y=[1566.0] (must be same and length>=4)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | could have reported an average CPU frequency of 2733 MHz (4 samples)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | ..............................
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . Timing measurements:
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . get job = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . initial setup = 3 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . payload setup = 7 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . stage-in = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . payload execution = 61 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . stage-out = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . log creation = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | ..............................
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895816657/pilotlog.txt
[2025-11-24 19:50:05] 2025-11-25 03:49:29,791 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 19:50:05] - Log from pilotlog.txt -
[2025-11-24 19:50:05] 2025-11-25 03:49:29,776 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895816657/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | INFO     | extracted standard info from prmon json
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 19:50:05] 2025-11-25 03:49:29,778 | WARNING  | wrong length of table data, x=[1764042389.0], y=[1566.0] (must be same and length>=4)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | could have reported an average CPU frequency of 2733 MHz (4 samples)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | ..............................
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . Timing measurements:
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . get job = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . initial setup = 3 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . payload setup = 7 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . stage-in = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . payload execution = 61 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . stage-out = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . log creation = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | ..............................
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895816657/pilotlog.txt
[2025-11-24 19:50:05] 2025-11-25 03:49:29,791 | WARNING  | 
[2025-11-24 19:50:05] [begin log extracts]
[2025-11-24 19:50:05] - Log from pilotlog.txt -
[2025-11-24 19:50:05] 2025-11-25 03:49:29,776 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895816657/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | INFO     | extracted standard info from prmon json
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 19:50:05] 2025-11-25 03:49:29,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 19:50:05] 2025-11-25 03:49:29,778 | WARNING  | wrong length of table data, x=[1764042389.0], y=[1566.0] (must be same and length>=4)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | could have reported an average CPU frequency of 2733 MHz (4 samples)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | ..............................
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . Timing measurements:
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . get job = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . initial setup = 3 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . payload setup = 7 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . stage-in = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . payload execution = 61 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . stage-out = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | . log creation = 0 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | ..............................
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 19:50:05] 2025-11-25 03:49:29,779 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895816657/pilotlog.txt
[2025-11-24 19:50:05] [end log extracts]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,792 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,792 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 19:50:05] 2025-11-25 03:49:29,851 | INFO     | 
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | job summary report
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | --------------------------------------------------
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | PanDA job id: 6895816657
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | task id: 47556149
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 19:47:19,154 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | pilot state: failed 
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | transexitcode: 65
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | exeerrorcode: 65
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | exitcode: 65
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | cpuconsumptiontime: 43 s
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | nevents: 0
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | neventsw: 0
[2025-11-24 19:50:05] 2025-11-25 03:49:29,852 | INFO     | pid: 1125983
[2025-11-24 19:50:05] 2025-11-25 03:49:29,853 | INFO     | pgrp: 1125983
[2025-11-24 19:50:05] 2025-11-25 03:49:29,853 | INFO     | corecount: 12
[2025-11-24 19:50:05] 2025-11-25 03:49:29,853 | INFO     | event service: False
[2025-11-24 19:50:05] 2025-11-25 03:49:29,853 | INFO     | sizes: {0: 2284307, 5: 2284569, 11: 2284625, 72: 2310022, 74: 2314312, 77: 2314340, 196: 2314662}
[2025-11-24 19:50:05] 2025-11-25 03:49:29,853 | INFO     | --------------------------------------------------
[2025-11-24 19:50:05] 2025-11-25 03:49:29,853 | INFO     | 
[2025-11-24 19:50:05] 2025-11-25 03:49:29,853 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | job 6895816657 has completed (purged errors)
[2025-11-24 19:50:05] 2025-11-25 03:49:29,869 | INFO     | overall cleanup function is called
[2025-11-24 19:50:05] 2025-11-25 03:49:30,876 | INFO     | --- collectZombieJob: --- 10, [1125983]
[2025-11-24 19:50:05] 2025-11-25 03:49:30,877 | INFO     | zombie collector waiting for pid 1125983
[2025-11-24 19:50:05] 2025-11-25 03:49:30,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:50:05] 2025-11-25 03:49:30,877 | INFO     | collected zombie processes
[2025-11-24 19:50:05] 2025-11-25 03:49:30,877 | INFO     | will attempt to kill all subprocesses of pid=1125983
[2025-11-24 19:50:05] 2025-11-25 03:49:31,085 | INFO     | process IDs to be killed: [1125983] (in reverse order)
[2025-11-24 19:50:05] 2025-11-25 03:49:31,157 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:50:05] 2025-11-25 03:49:31,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:50:05] 2025-11-25 03:49:31,167 | INFO     | did not find any defunct processes belonging to 1125983
[2025-11-24 19:50:05] 2025-11-25 03:49:31,176 | INFO     | did not find any defunct processes belonging to 1125983
[2025-11-24 19:50:05] 2025-11-25 03:49:31,176 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:50:05] 2025-11-25 03:49:31,177 | INFO     | ready for new job
[2025-11-24 19:50:05] 2025-11-25 03:49:31,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:50:05] 2025-11-25 03:49:31,179 | INFO     | ***************************************
[2025-11-24 19:50:05] 2025-11-25 03:49:31,179 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:50:05] 2025-11-25 03:49:31,179 | INFO     | ***************************************
[2025-11-24 19:50:05] 2025-11-25 03:49:31,179 | INFO     | 
[2025-11-24 19:50:05] 2025-11-25 03:49:31,181 | INFO     | architecture information:
[2025-11-24 19:50:05] 2025-11-25 03:49:31,181 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:50:05] 2025-11-25 03:49:31,200 | INFO     | cat /etc/os-release:
[2025-11-24 19:50:05] NAME="CentOS Linux"
[2025-11-24 19:50:05] VERSION="7 (Core)"
[2025-11-24 19:50:05] ID="centos"
[2025-11-24 19:50:05] ID_LIKE="rhel fedora"
[2025-11-24 19:50:05] VERSION_ID="7"
[2025-11-24 19:50:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:50:05] ANSI_COLOR="0;31"
[2025-11-24 19:50:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:50:05] HOME_URL="https://www.centos.org/"
[2025-11-24 19:50:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:50:05] 
[2025-11-24 19:50:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:50:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:50:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:50:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:50:05] 
[2025-11-24 19:50:05] 2025-11-25 03:49:31,200 | INFO     | ***************************************
[2025-11-24 19:50:05] 2025-11-25 03:49:31,704 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 19:50:05] 2025-11-25 03:49:31,716 | INFO     | sufficient remaining disk space (1513148645376 B)
[2025-11-24 19:50:05] 2025-11-25 03:49:31,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:50:05] 2025-11-25 03:49:31,717 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:50:05] 2025-11-25 03:49:31,717 | INFO     | update_server=False
[2025-11-24 19:50:05] 2025-11-25 03:49:31,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:50:05] 2025-11-25 03:49:31,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:50:05] 2025-11-25 03:49:31,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:50:05] 2025-11-25 03:49:31,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:50:05] 2025-11-25 03:49:31,718 | INFO     | aborting loop
[2025-11-24 19:50:05] 2025-11-25 03:49:32,206 | INFO     | all data control threads have been joined
[2025-11-24 19:50:05] 2025-11-25 03:49:32,722 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:32,723 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:32,723 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:32,836 | INFO     | all job control threads have been joined
[2025-11-24 19:50:05] 2025-11-25 03:49:33,120 | INFO     | all payload control threads have been joined
[2025-11-24 19:50:05] 2025-11-25 03:49:33,150 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,212 | INFO     | [data] control thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,459 | INFO     | [job] validate thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,608 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,633 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,682 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,693 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,725 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,842 | INFO     | [job] control thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:33,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:34,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:50:05] 2025-11-25 03:49:34,126 | INFO     | [payload] control thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:34,232 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:38,037 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:50:05] 2025-11-25 03:49:58,566 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:50:05] 2025-11-25 03:49:59,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194733086528)>', '<ExcThread(monitor, started 140194334353152)>']
[2025-11-24 19:50:05] 2025-11-25 03:50:02,023 | INFO     | PID=1115917 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 19:50:05] 2025-11-25 03:50:02,023 | INFO     | .. there are 35 such processes running
[2025-11-24 19:50:05] 2025-11-25 03:50:02,025 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:50:05] 2025-11-25 03:50:02,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:50:05] 2025-11-25 03:50:02,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:50:05] 2025-11-25 03:50:02,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:50:05] 2025-11-25 03:50:02,025 | INFO     | [monitor] control thread has ended
[2025-11-24 19:50:05] 2025-11-25 03:50:04,989 | INFO     | all workflow threads have been joined
[2025-11-24 19:50:05] 2025-11-25 03:50:04,990 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:50:05] 2025-11-25 03:50:04,990 | INFO     | traces error code: 0
[2025-11-24 19:50:05] 2025-11-25 03:50:04,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:50:05] 2025-11-25 03:50:05,107 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:50:05] 2025-11-25 03:50:05,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:50:05] 2025-11-25 03:50:05,116 [wrapper] pilotpid: 1115917
[2025-11-24 19:50:05] 2025-11-25 03:50:05,118 [wrapper] Pilot exit status: 0
[2025-11-24 19:50:05] 2025-11-25 03:50:05,135 [wrapper] pandaids: 6895816657
[2025-11-24 19:50:05] 2025-11-25 03:50:05,219 [wrapper] cleanup supervisor_pilot 1115930 1115918
[2025-11-24 19:50:05] 2025-11-25 03:50:05,221 [wrapper] Test setup, not cleaning
[2025-11-24 19:50:05] 2025-11-25 03:50:05,232 [wrapper] apfmon messages muted
[2025-11-24 19:50:05] 2025-11-25 03:50:05,237 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:50:05] 2025-11-25 03:50:05,259 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:50:05]  *** Error codes and diagnostics ***
[2025-11-24 19:50:05]     "exeErrorCode": 65,
[2025-11-24 19:50:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 19:50:05]     "pilotErrorCode": 1305,
[2025-11-24 19:50:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 19:50:05]  *** Listing of results directory ***
[2025-11-24 19:50:05] total 403036
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc    576529 Nov 24 07:13 pilot3.tar.gz
[2025-11-24 19:50:05] -rwx------. 1 boinc boinc     36292 Nov 24 08:01 runpilot2-wrapper.sh
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc      5112 Nov 24 08:01 queuedata.json
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc       100 Nov 24 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:50:05] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 19:45 run_atlas
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc       105 Nov 24 19:45 job.xml
[2025-11-24 19:50:05] -rw-r--r--. 2 boinc boinc 408510295 Nov 24 19:45 EVNT.47483658._001374.pool.root.1
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc      6595 Nov 24 19:45 init_data.xml
[2025-11-24 19:50:05] -rw-r--r--. 2 boinc boinc     15847 Nov 24 19:45 start_atlas.sh
[2025-11-24 19:50:05] drwxrwx--x. 2 boinc boinc      4096 Nov 24 19:45 shared
[2025-11-24 19:50:05] -rw-r--r--. 2 boinc boinc    590103 Nov 24 19:45 input.tar.gz
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc         0 Nov 24 19:45 boinc_lockfile
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc      2786 Nov 24 19:45 pandaJob.out
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc    991801 Nov 24 19:45 agis_schedconf.cvmfs.json
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc   1516227 Nov 24 19:45 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:50:05] drwx------. 5 boinc boinc      4096 Nov 24 19:45 pilot3
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc       523 Nov 24 19:47 boinc_task_state.xml
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc       994 Nov 24 19:47 memory_monitor_summary.json
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc     48509 Nov 24 19:47 log.47556149._003603.job.log.tgz.1
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc     10325 Nov 24 19:49 heartbeat.json
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc        95 Nov 24 19:50 pilot_heartbeat.json
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc        23 Nov 24 19:50 wrapper_checkpoint.txt
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc      8192 Nov 24 19:50 boinc_mmap_file
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc      4823 Nov 24 19:50 pilotlog.txt
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc     94249 Nov 24 19:50 log.47556149._003603.job.log.1
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc       186 Nov 24 19:50 output.list
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc       620 Nov 24 19:50 runtime_log
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc    163840 Nov 24 19:50 result.tar.gz
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc       644 Nov 24 19:50 XrkLDmqBoh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXkLKDmsyslyn.diag
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc      8636 Nov 24 19:50 runtime_log.err
[2025-11-24 19:50:05] -rw-r--r--. 1 boinc boinc     22394 Nov 24 19:50 stderr.txt
[2025-11-24 19:50:05] No HITS result produced
[2025-11-24 19:50:05]  *** Contents of shared directory: ***
[2025-11-24 19:50:05] total 399696
[2025-11-24 19:50:05] -rw-r--r--. 2 boinc boinc 408510295 Nov 24 19:45 ATLAS.root_0
[2025-11-24 19:50:05] -rw-r--r--. 2 boinc boinc     15847 Nov 24 19:45 start_atlas.sh
[2025-11-24 19:50:05] -rw-r--r--. 2 boinc boinc    590103 Nov 24 19:45 input.tar.gz
[2025-11-24 19:50:05] -rw-------. 1 boinc boinc    163840 Nov 24 19:50 result.tar.gz
19:50:07 (1109295): run_atlas exited; CPU time 41.752954
19:50:07 (1109295): called boinc_finish(0)

</stderr_txt>
]]>

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