Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:38 (748155): wrapper (7.7.26015): starting
00:03:38 (748155): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:03:38] Arguments: --nthreads 12
[2025-11-25 00:03:38] Threads: 12
[2025-11-25 00:03:38] Checking for CVMFS
[2025-11-25 00:03:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:41] 2.13.2.0 12166 33957 291712 153270 3 647 24377071 40960001 23676 16776704 0 61564701 99.734 37213445 34242 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:03:41] CVMFS is ok
[2025-11-25 00:03:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:41] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:41] Checking for apptainer binary...
[2025-11-25 00:03:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:41] Running /usr/bin/apptainer --version
[2025-11-25 00:03:41] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:42] c-211-33-1.aglt2.org
[2025-11-25 00:03:42] apptainer works
[2025-11-25 00:03:42] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:03:42] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:03:42] Starting ATLAS job with PandaID=6895383333
[2025-11-25 00:03:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:33:55]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:33:55] 2025-11-25 17:33:22,516 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:33:55] 2025-11-25 17:33:22,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:33:55] 2025-11-25 17:33:22,529 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:33:55] 2025-11-25 17:33:22,530 | INFO     | sum of square deviations: 122603860155.63489
[2025-11-25 12:33:55] 2025-11-25 17:33:22,545 | INFO     | sum of deviations: 2286813424108.3223
[2025-11-25 12:33:55] 2025-11-25 17:33:22,545 | INFO     | mean x: 1764069619.5504086
[2025-11-25 12:33:55] 2025-11-25 17:33:22,545 | INFO     | mean y: 3427329.7615803815
[2025-11-25 12:33:55] 2025-11-25 17:33:22,546 | INFO     | intersect: -32900088774.287674
[2025-11-25 12:33:55] 2025-11-25 17:33:22,547 | INFO     | chi2: 11.658533840734442
[2025-11-25 12:33:55] 2025-11-25 17:33:22,548 | INFO     | sum of square deviations: 120115687036.29102
[2025-11-25 12:33:55] 2025-11-25 17:33:22,562 | INFO     | sum of deviations: 2601051824978.9834
[2025-11-25 12:33:55] 2025-11-25 17:33:22,562 | INFO     | mean x: 1764069467.0713305
[2025-11-25 12:33:55] 2025-11-25 17:33:22,562 | INFO     | mean y: 3446586.769547325
[2025-11-25 12:33:55] 2025-11-25 17:33:22,562 | INFO     | intersect: -38196693793.97244
[2025-11-25 12:33:55] 2025-11-25 17:33:22,564 | INFO     | chi2: 8.119379529734692
[2025-11-25 12:33:55] 2025-11-25 17:33:22,564 | INFO     | current chi2=8.119379529734692 (change=30.356770065152528 %)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,565 | INFO     | sum of square deviations: 117661377308.98344
[2025-11-25 12:33:55] 2025-11-25 17:33:22,578 | INFO     | sum of deviations: 2677599250369.018
[2025-11-25 12:33:55] 2025-11-25 17:33:22,578 | INFO     | mean x: 1764069314.5911603
[2025-11-25 12:33:55] 2025-11-25 17:33:22,579 | INFO     | mean y: 3451328.8784530386
[2025-11-25 12:33:55] 2025-11-25 17:33:22,579 | INFO     | intersect: -40141163517.37017
[2025-11-25 12:33:55] 2025-11-25 17:33:22,580 | INFO     | chi2: 7.624032427947215
[2025-11-25 12:33:55] 2025-11-25 17:33:22,580 | INFO     | current chi2=7.624032427947215 (change=6.100799943806331 %)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,580 | INFO     | right removable region: 723
[2025-11-25 12:33:55] 2025-11-25 17:33:22,581 | INFO     | sum of square deviations: 120114321246.29095
[2025-11-25 12:33:55] 2025-11-25 17:33:22,594 | INFO     | sum of deviations: 1933879833861.8203
[2025-11-25 12:33:55] 2025-11-25 17:33:22,594 | INFO     | mean x: 1764069772.0713305
[2025-11-25 12:33:55] 2025-11-25 17:33:22,594 | INFO     | mean y: 3448946.426611797
[2025-11-25 12:33:55] 2025-11-25 17:33:22,595 | INFO     | intersect: -28398651005.824577
[2025-11-25 12:33:55] 2025-11-25 17:33:22,596 | INFO     | chi2: 7.382757207550879
[2025-11-25 12:33:55] 2025-11-25 17:33:22,596 | INFO     | current chi2=7.382757207550879 (change=36.67508017383947 %)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,597 | INFO     | sum of square deviations: 117658689948.79971
[2025-11-25 12:33:55] 2025-11-25 17:33:22,609 | INFO     | sum of deviations: 1641673729903.1687
[2025-11-25 12:33:55] 2025-11-25 17:33:22,610 | INFO     | mean x: 1764069924.5925415
[2025-11-25 12:33:55] 2025-11-25 17:33:22,610 | INFO     | mean y: 3467084.549723757
[2025-11-25 12:33:55] 2025-11-25 17:33:22,610 | INFO     | intersect: -24610331132.786133
[2025-11-25 12:33:55] 2025-11-25 17:33:22,611 | INFO     | chi2: 4.603296522495713
[2025-11-25 12:33:55] 2025-11-25 17:33:22,611 | INFO     | current chi2=4.603296522495713 (change=37.64800340735046 %)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,612 | INFO     | sum of square deviations: 115237352127.56827
[2025-11-25 12:33:55] 2025-11-25 17:33:22,625 | INFO     | sum of deviations: 1528562525995.6353
[2025-11-25 12:33:55] 2025-11-25 17:33:22,625 | INFO     | mean x: 1764070077.094576
[2025-11-25 12:33:55] 2025-11-25 17:33:22,625 | INFO     | mean y: 3474199.931849791
[2025-11-25 12:33:55] 2025-11-25 17:33:22,625 | INFO     | intersect: -23395982341.65869
[2025-11-25 12:33:55] 2025-11-25 17:33:22,626 | INFO     | chi2: 4.272333897637378
[2025-11-25 12:33:55] 2025-11-25 17:33:22,626 | INFO     | current chi2=4.272333897637378 (change=7.189687286946713 %)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,626 | INFO     | left removable region: 30
[2025-11-25 12:33:55] 2025-11-25 17:33:22,627 | INFO     | sum of square deviations: 103182585609.53242
[2025-11-25 12:33:55] 2025-11-25 17:33:22,639 | INFO     | sum of deviations: 1728504517324.0781
[2025-11-25 12:33:55] 2025-11-25 17:33:22,640 | INFO     | mean x: 1764070199.116883
[2025-11-25 12:33:55] 2025-11-25 17:33:22,640 | INFO     | mean y: 3511224.924963925
[2025-11-25 12:33:55] 2025-11-25 17:33:22,640 | INFO     | intersect: -29548019103.935303
[2025-11-25 12:33:55] 2025-11-25 17:33:22,641 | INFO     | chi2: 0.02249288064645811
[2025-11-25 12:33:55] 2025-11-25 17:33:22,641 | INFO     | current memory leak: 16.75 B/s (using 693 data points, chi2=0.02)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,647 | INFO     | could have reported an average CPU frequency of 2610 MHz (28 samples)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,648 | INFO     | ..............................
[2025-11-25 12:33:55] 2025-11-25 17:33:22,648 | INFO     | . Timing measurements:
[2025-11-25 12:33:55] 2025-11-25 17:33:22,648 | INFO     | . get job = 0 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,648 | INFO     | . initial setup = 7 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,648 | INFO     | . payload setup = 52 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,648 | INFO     | . stage-in = 0 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,648 | INFO     | . payload execution = 44757 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,649 | INFO     | . stage-out = 3 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,649 | INFO     | . log creation = 1 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,649 | INFO     | ..............................
[2025-11-25 12:33:55] 2025-11-25 17:33:22,794 | INFO     | 
[2025-11-25 12:33:55] 2025-11-25 17:33:22,794 | INFO     | job summary report
[2025-11-25 12:33:55] 2025-11-25 17:33:22,794 | INFO     | --------------------------------------------------
[2025-11-25 12:33:55] 2025-11-25 17:33:22,794 | INFO     | PanDA job id: 6895383333
[2025-11-25 12:33:55] 2025-11-25 17:33:22,794 | INFO     | task id: 47556149
[2025-11-25 12:33:55] 2025-11-25 17:33:22,794 | INFO     | errors: (none)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,794 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | pilot state: finished 
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | transexitcode: 0
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | exeerrorcode: 0
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | exeerrordiag: 
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | exitcode: 0
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | exitmsg: OK
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | cpuconsumptiontime: 260283 s
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | nevents: 1000
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | neventsw: 0
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | pid: 769279
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | pgrp: 769279
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | corecount: 12
[2025-11-25 12:33:55] 2025-11-25 17:33:22,795 | INFO     | event service: False
[2025-11-25 12:33:55] 2025-11-25 17:33:22,796 | INFO     | sizes: {0: 2283431, 1: 2284116, 2: 2284144, 3: 2284343, 15: 2284343, 26: 2284371, 34: 2284789, 37: 2284817, 44814: 2330178, 44818: 2339177, 44821: 2339233, 44827: 
[2025-11-25 12:33:55] 2025-11-25 17:33:22,796 | INFO     | --------------------------------------------------
[2025-11-25 12:33:55] 2025-11-25 17:33:22,796 | INFO     | 
[2025-11-25 12:33:55] 2025-11-25 17:33:22,796 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 12:33:55] 2025-11-25 17:33:22,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:33:55] 2025-11-25 17:33:22,822 | INFO     | job 6895383333 has completed (purged errors)
[2025-11-25 12:33:55] 2025-11-25 17:33:22,822 | INFO     | overall cleanup function is called
[2025-11-25 12:33:55] 2025-11-25 17:33:23,861 | INFO     | --- collectZombieJob: --- 10, [769279]
[2025-11-25 12:33:55] 2025-11-25 17:33:23,861 | INFO     | zombie collector waiting for pid 769279
[2025-11-25 12:33:55] 2025-11-25 17:33:23,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:33:55] 2025-11-25 17:33:23,861 | INFO     | collected zombie processes
[2025-11-25 12:33:55] 2025-11-25 17:33:23,862 | INFO     | will attempt to kill all subprocesses of pid=769279
[2025-11-25 12:33:55] 2025-11-25 17:33:24,438 | INFO     | process IDs to be killed: [769279] (in reverse order)
[2025-11-25 12:33:55] 2025-11-25 17:33:24,564 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:33:55] 2025-11-25 17:33:24,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:33:55] 2025-11-25 17:33:24,589 | INFO     | did not find any defunct processes belonging to 769279
[2025-11-25 12:33:55] 2025-11-25 17:33:24,604 | INFO     | did not find any defunct processes belonging to 769279
[2025-11-25 12:33:55] 2025-11-25 17:33:24,605 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:33:55] 2025-11-25 17:33:24,605 | INFO     | ready for new job
[2025-11-25 12:33:55] 2025-11-25 17:33:24,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:33:55] 2025-11-25 17:33:24,611 | INFO     | ***************************************
[2025-11-25 12:33:55] 2025-11-25 17:33:24,612 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:33:55] 2025-11-25 17:33:24,612 | INFO     | ***************************************
[2025-11-25 12:33:55] 2025-11-25 17:33:24,612 | INFO     | 
[2025-11-25 12:33:55] 2025-11-25 17:33:24,618 | INFO     | architecture information:
[2025-11-25 12:33:55] 2025-11-25 17:33:24,624 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:33:55] 2025-11-25 17:33:24,648 | INFO     | cat /etc/os-release:
[2025-11-25 12:33:55] NAME="CentOS Linux"
[2025-11-25 12:33:55] VERSION="7 (Core)"
[2025-11-25 12:33:55] ID="centos"
[2025-11-25 12:33:55] ID_LIKE="rhel fedora"
[2025-11-25 12:33:55] VERSION_ID="7"
[2025-11-25 12:33:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:33:55] ANSI_COLOR="0;31"
[2025-11-25 12:33:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:33:55] HOME_URL="https://www.centos.org/"
[2025-11-25 12:33:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:33:55] 
[2025-11-25 12:33:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:33:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:33:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:33:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:33:55] 
[2025-11-25 12:33:55] 2025-11-25 17:33:24,649 | INFO     | ***************************************
[2025-11-25 12:33:55] 2025-11-25 17:33:25,154 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 12:33:55] 2025-11-25 17:33:25,177 | INFO     | sufficient remaining disk space (122222018560 B)
[2025-11-25 12:33:55] 2025-11-25 17:33:25,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:33:55] 2025-11-25 17:33:25,178 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:33:55] 2025-11-25 17:33:25,178 | INFO     | update_server=False
[2025-11-25 12:33:55] 2025-11-25 17:33:25,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:33:55] 2025-11-25 17:33:25,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:33:55] 2025-11-25 17:33:25,277 | INFO     | all data control threads have been joined
[2025-11-25 12:33:55] 2025-11-25 17:33:25,619 | INFO     | all payload control threads have been joined
[2025-11-25 12:33:55] 2025-11-25 17:33:25,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:33:55] 2025-11-25 17:33:25,703 | INFO     | aborting loop
[2025-11-25 12:33:55] 2025-11-25 17:33:26,183 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:26,259 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:26,278 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:26,283 | INFO     | [data] control thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:26,304 | INFO     | all job control threads have been joined
[2025-11-25 12:33:55] 2025-11-25 17:33:26,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:26,626 | INFO     | [payload] control thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:26,708 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:26,816 | INFO     | [job] validate thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:27,169 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:27,192 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:27,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:33:55] 2025-11-25 17:33:27,310 | INFO     | [job] control thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:27,368 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:27,681 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:27,695 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:27,799 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:33:55] 2025-11-25 17:33:28,804 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:30,478 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:33:55] 2025-11-25 17:33:31,251 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:33:55] 2025-11-25 17:33:32,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414999697216)>', '<ExcThread(monitor, started 140414644360960)>']
[2025-11-25 12:33:55] 2025-11-25 17:33:37,743 | INFO     | all workflow threads have been joined
[2025-11-25 12:33:55] 2025-11-25 17:33:37,744 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:33:55] 2025-11-25 17:33:37,744 | INFO     | traces error code: 0
[2025-11-25 12:33:55] 2025-11-25 17:33:37,745 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:33:55] 2025-11-25 17:33:54,873 | INFO     | PID=758368 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 12:33:55] 2025-11-25 17:33:54,874 | INFO     | .. there are 18 such processes running
[2025-11-25 12:33:55] 2025-11-25 17:33:54,874 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:33:55] 2025-11-25 17:33:54,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:33:55] 2025-11-25 17:33:54,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:33:55] 2025-11-25 17:33:54,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:33:55] 2025-11-25 17:33:54,875 | INFO     | [monitor] control thread has ended
[2025-11-25 12:33:55] 2025-11-25 17:33:55,193 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:33:55] 2025-11-25 17:33:55,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:33:55] 2025-11-25 17:33:55,199 [wrapper] pilotpid: 758368
[2025-11-25 12:33:55] 2025-11-25 17:33:55,202 [wrapper] Pilot exit status: 0
[2025-11-25 12:33:55] 2025-11-25 17:33:55,215 [wrapper] pandaids: 6895383333
[2025-11-25 12:33:55] 2025-11-25 17:33:55,290 [wrapper] cleanup supervisor_pilot 2136702 758369
[2025-11-25 12:33:55] 2025-11-25 17:33:55,297 [wrapper] Test setup, not cleaning
[2025-11-25 12:33:55] 2025-11-25 17:33:55,300 [wrapper] apfmon messages muted
[2025-11-25 12:33:55] 2025-11-25 17:33:55,303 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:33:55] 2025-11-25 17:33:55,305 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:33:55]  *** Error codes and diagnostics ***
[2025-11-25 12:33:55]     "exeErrorCode": 0,
[2025-11-25 12:33:55]     "exeErrorDiag": "",
[2025-11-25 12:33:55]     "pilotErrorCode": 0,
[2025-11-25 12:33:55]     "pilotErrorDiag": "",
[2025-11-25 12:33:55]  *** Listing of results directory ***
[2025-11-25 12:33:55] total 1314080
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 23:09 pilot3.tar.gz
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 23:19 queuedata.json
[2025-11-25 12:33:55] -rwx------. 1 boincer umatlas     36292 Nov 23 23:19 runpilot2-wrapper.sh
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:33:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 12:33:55] -rw-r--r--. 2 boincer umatlas 410501864 Nov 25 00:03 EVNT.47483658._001216.pool.root.1
[2025-11-25 12:33:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 12:33:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 12:33:55] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:03 input.tar.gz
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:03 pandaJob.out
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas    991801 Nov 25 00:05 agis_schedconf.cvmfs.json
[2025-11-25 12:33:55] drwx------. 5 boincer umatlas      4096 Nov 25 00:05 pilot3
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas       533 Nov 25 12:22 boinc_task_state.xml
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas      6881 Nov 25 12:29 init_data.xml
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas 915425373 Nov 25 12:32 HITS.47556149._002028.pool.root.1
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas      1060 Nov 25 12:33 memory_monitor_summary.json
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas        95 Nov 25 12:33 pilot_heartbeat.json
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas   1516240 Nov 25 12:33 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas   2366001 Nov 25 12:33 log.47556149._002028.job.log.tgz.1
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas      8627 Nov 25 12:33 heartbeat.json
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas        29 Nov 25 12:33 wrapper_checkpoint.txt
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 12:33 boinc_mmap_file
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas       822 Nov 25 12:33 pilotlog.txt
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas   5521119 Nov 25 12:33 log.47556149._002028.job.log.1
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas       353 Nov 25 12:33 output.list
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas       620 Nov 25 12:33 runtime_log
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas   7905280 Nov 25 12:33 result.tar.gz
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas       662 Nov 25 12:33 TPtNDmXEdh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfPLKDmhxlGWn.diag
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas      9355 Nov 25 12:33 runtime_log.err
[2025-11-25 12:33:55] -rw-r--r--. 1 boincer umatlas     21175 Nov 25 12:33 stderr.txt
[2025-11-25 12:33:55] HITS file was successfully produced:
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas 915425373 Nov 25 12:32 shared/HITS.pool.root.1
[2025-11-25 12:33:55]  *** Contents of shared directory: ***
[2025-11-25 12:33:55] total 1303180
[2025-11-25 12:33:55] -rw-r--r--. 2 boincer umatlas 410501864 Nov 25 00:03 ATLAS.root_0
[2025-11-25 12:33:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 12:33:55] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:03 input.tar.gz
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas 915425373 Nov 25 12:32 HITS.pool.root.1
[2025-11-25 12:33:55] -rw-------. 1 boincer umatlas   7905280 Nov 25 12:33 result.tar.gz
12:33:57 (748155): run_atlas exited; CPU time 261127.425309
12:33:57 (748155): called boinc_finish(0)

</stderr_txt>
]]>

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