Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:38 (2954934): wrapper (7.7.26015): starting
04:44:38 (2954934): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 04:44:38] Arguments: --nthreads 3
[2025-11-25 04:44:38] Threads: 3
[2025-11-25 04:44:38] Checking for CVMFS
[2025-11-25 04:44:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:44:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:44:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:44:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:44:38] 2.9.2.0 2683671 57 62748 153268 2 88 35096856 36864000 0 130560 0 813860 100.000 3885 22327 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 04:44:38] CVMFS is ok
[2025-11-25 04:44:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:44:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:44:38] Further information can be found at the LHC@home message board.
[2025-11-25 04:44:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:44:38] Checking for apptainer binary...
[2025-11-25 04:44:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:44:38] Running /usr/bin/apptainer --version
[2025-11-25 04:44:38] apptainer version 1.4.1-1.1
[2025-11-25 04:44:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:44:38] thA335
[2025-11-25 04:44:38] apptainer works
[2025-11-25 04:44:38] Set ATHENA_PROC_NUMBER=3
[2025-11-25 04:44:38] Set ATHENA_CORE_NUMBER=3
[2025-11-25 04:44:38] Starting ATLAS job with PandaID=6895365851
[2025-11-25 04:44:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:48:57]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:48:57] 2025-11-25 03:48:02,139 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:48:57] 2025-11-25 03:48:02,148 | INFO     | cat /etc/os-release:
[2025-11-25 04:48:57] NAME="CentOS Linux"
[2025-11-25 04:48:57] VERSION="7 (Core)"
[2025-11-25 04:48:57] ID="centos"
[2025-11-25 04:48:57] ID_LIKE="rhel fedora"
[2025-11-25 04:48:57] VERSION_ID="7"
[2025-11-25 04:48:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:48:57] ANSI_COLOR="0;31"
[2025-11-25 04:48:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:48:57] HOME_URL="https://www.centos.org/"
[2025-11-25 04:48:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:48:57] 
[2025-11-25 04:48:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:48:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:48:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:48:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:48:57] 
[2025-11-25 04:48:57] 2025-11-25 03:48:02,148 | INFO     | ***************************************
[2025-11-25 04:48:57] 2025-11-25 03:48:02,652 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 04:48:57] 2025-11-25 03:48:02,666 | INFO     | sufficient remaining disk space (826931150848 B)
[2025-11-25 04:48:57] 2025-11-25 03:48:02,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:48:57] 2025-11-25 03:48:02,666 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:48:57] 2025-11-25 03:48:02,667 | INFO     | update_server=False
[2025-11-25 04:48:57] 2025-11-25 03:48:02,667 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:48:57] 2025-11-25 03:48:02,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:48:57] 2025-11-25 03:48:02,667 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 04:48:57] 2025-11-25 03:48:02,667 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:48:57] 2025-11-25 03:48:02,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:48:57] 2025-11-25 03:48:02,667 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:48:57] 2025-11-25 03:48:02,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:48:57] 2025-11-25 03:48:02,771 | INFO     | aborting loop
[2025-11-25 04:48:57] 2025-11-25 03:48:03,438 | INFO     | all data control threads have been joined
[2025-11-25 04:48:57] 2025-11-25 03:48:03,672 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:03,673 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:03,701 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:03,777 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:03,962 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:04,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:48:57] 2025-11-25 03:48:04,065 | INFO     | all payload control threads have been joined
[2025-11-25 04:48:57] 2025-11-25 03:48:04,222 | INFO     | all job control threads have been joined
[2025-11-25 04:48:57] 2025-11-25 03:48:04,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:48:57] 2025-11-25 03:48:04,444 | INFO     | [data] control thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:04,486 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:04,889 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:04,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:05,050 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:05,059 | INFO     | [job] validate thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:05,071 | INFO     | [payload] control thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:05,144 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:05,228 | INFO     | [job] control thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:06,066 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:08,248 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:48:57] 2025-11-25 03:48:51,303 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:48:57] 2025-11-25 03:48:52,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608983545664)>', '<ExcThread(monitor, started 140608362505984)>']
[2025-11-25 04:48:57] 2025-11-25 03:48:52,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:48:57] 2025-11-25 03:48:52,935 | INFO     | [monitor] control thread has ended
[2025-11-25 04:48:57] 2025-11-25 03:48:57,335 | INFO     | all workflow threads have been joined
[2025-11-25 04:48:57] 2025-11-25 03:48:57,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:48:57] 2025-11-25 03:48:57,337 | INFO     | traces error code: 0
[2025-11-25 04:48:57] 2025-11-25 03:48:57,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:48:57] 2025-11-25 03:48:57,385 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:48:57] 2025-11-25 03:48:57,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:48:57] 2025-11-25 03:48:57,391 [wrapper] pilotpid: 2958655
[2025-11-25 04:48:57] 2025-11-25 03:48:57,394 [wrapper] Pilot exit status: 0
[2025-11-25 04:48:57] 2025-11-25 03:48:57,401 [wrapper] pandaids: 6895365851
[2025-11-25 04:48:57] 2025-11-25 03:48:57,420 [wrapper] cleanup supervisor_pilot 2958661 2958656
[2025-11-25 04:48:57] 2025-11-25 03:48:57,423 [wrapper] Test setup, not cleaning
[2025-11-25 04:48:57] 2025-11-25 03:48:57,426 [wrapper] apfmon messages muted
[2025-11-25 04:48:57] 2025-11-25 03:48:57,429 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:48:57] 2025-11-25 03:48:57,431 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:48:57]  *** Error codes and diagnostics ***
[2025-11-25 04:48:57]     "exeErrorCode": 65,
[2025-11-25 04:48:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 04:48:57]     "pilotErrorCode": 1305,
[2025-11-25 04:48:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 04:48:57]  *** Listing of results directory ***
[2025-11-25 04:48:57] total 406016
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc    576529 Nov 23 18:39 pilot3.tar.gz
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc      5112 Nov 23 18:58 queuedata.json
[2025-11-25 04:48:57] -rwx------ 1 boinc boinc     36292 Nov 23 18:59 runpilot2-wrapper.sh
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc       100 Nov 25 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:48:57] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 04:44 run_atlas
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc       105 Nov 25 04:44 job.xml
[2025-11-25 04:48:57] -rw-r--r-- 2 boinc boinc 411567612 Nov 25 04:44 EVNT.47483658._000835.pool.root.1
[2025-11-25 04:48:57] -rw-r--r-- 2 boinc boinc    590104 Nov 25 04:44 input.tar.gz
[2025-11-25 04:48:57] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:44 start_atlas.sh
[2025-11-25 04:48:57] drwxrwx--x 2 boinc boinc      4096 Nov 25 04:44 shared
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:44 boinc_setup_complete
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc      6196 Nov 25 04:44 init_data.xml
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:44 boinc_lockfile
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc      2785 Nov 25 04:44 pandaJob.out
[2025-11-25 04:48:57] -rw------- 1 boinc boinc    991801 Nov 25 04:44 agis_schedconf.cvmfs.json
[2025-11-25 04:48:57] -rw------- 1 boinc boinc   1516227 Nov 25 04:44 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:48:57] drwx------ 5 boinc boinc      4096 Nov 25 04:44 pilot3
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc       522 Nov 25 04:45 boinc_task_state.xml
[2025-11-25 04:48:57] -rw------- 1 boinc boinc       985 Nov 25 04:45 memory_monitor_summary.json
[2025-11-25 04:48:57] -rw------- 1 boinc boinc     55663 Nov 25 04:45 log.47556137._008214.job.log.tgz.1
[2025-11-25 04:48:57] -rw------- 1 boinc boinc        95 Nov 25 04:47 pilot_heartbeat.json
[2025-11-25 04:48:57] -rw------- 1 boinc boinc      8387 Nov 25 04:48 heartbeat.json
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc      8192 Nov 25 04:48 boinc_mmap_file
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc        22 Nov 25 04:48 wrapper_checkpoint.txt
[2025-11-25 04:48:57] -rw------- 1 boinc boinc      4556 Nov 25 04:48 pilotlog.txt
[2025-11-25 04:48:57] -rw------- 1 boinc boinc     91515 Nov 25 04:48 log.47556137._008214.job.log.1
[2025-11-25 04:48:57] -rw------- 1 boinc boinc       186 Nov 25 04:48 output.list
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc       620 Nov 25 04:48 runtime_log
[2025-11-25 04:48:57] -rw------- 1 boinc boinc    163840 Nov 25 04:48 result.tar.gz
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc      8744 Nov 25 04:48 runtime_log.err
[2025-11-25 04:48:57] -rw------- 1 boinc boinc       649 Nov 25 04:48 TKxNDmfXTh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmU5KKDmX6decm.diag
[2025-11-25 04:48:57] -rw-r--r-- 1 boinc boinc      9180 Nov 25 04:48 stderr.txt
[2025-11-25 04:48:57] No HITS result produced
[2025-11-25 04:48:57]  *** Contents of shared directory: ***
[2025-11-25 04:48:57] total 402684
[2025-11-25 04:48:57] -rw-r--r-- 2 boinc boinc 411567612 Nov 25 04:44 ATLAS.root_0
[2025-11-25 04:48:57] -rw-r--r-- 2 boinc boinc    590104 Nov 25 04:44 input.tar.gz
[2025-11-25 04:48:57] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:44 start_atlas.sh
[2025-11-25 04:48:57] -rw------- 1 boinc boinc    163840 Nov 25 04:48 result.tar.gz
04:48:59 (2954934): run_atlas exited; CPU time 30.566727
04:48:59 (2954934): called boinc_finish(0)

</stderr_txt>
]]>

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