Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:20:03 (4068811): wrapper (7.7.26015): starting
09:20:03 (4068811): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 09:20:03] Arguments: --nthreads 10
[2025-11-26 09:20:03] Threads: 10
[2025-11-26 09:20:03] Checking for CVMFS
[2025-11-26 09:20:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:20:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:20:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:20:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:20:04] 2.13.3.0 7351 11624 50924 153330 2 56 3284423 4096000 9842 130560 0 36009386 99.983 718571 772 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 09:20:04] CVMFS is ok
[2025-11-26 09:20:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:20:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 09:20:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 09:20:04] Further information can be found at the LHC@home message board.
[2025-11-26 09:20:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:20:04] Checking for apptainer binary...
[2025-11-26 09:20:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:20:04] Running /usr/bin/apptainer --version
[2025-11-26 09:20:05] apptainer version 1.4.2
[2025-11-26 09:20:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:20:05] 3950x-linux
[2025-11-26 09:20:05] apptainer works
[2025-11-26 09:20:05] Set ATHENA_PROC_NUMBER=10
[2025-11-26 09:20:05] Set ATHENA_CORE_NUMBER=10
[2025-11-26 09:20:05] Starting ATLAS job with PandaID=6895343314
[2025-11-26 09:20:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc228/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:51:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:51:01] 2025-11-27 15:50:03,824 | INFO     | monitor loop #5224: job 0:6895343314 is in state 'finished'
[2025-11-27 07:51:01] 2025-11-27 15:50:03,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:51:01] 2025-11-27 15:50:04,936 | INFO     | time since job start (80964s) is within the limit (172800.0s)
[2025-11-27 07:51:01] 2025-11-27 15:50:06,327 | INFO     | monitor loop #5225: job 0:6895343314 is in state 'finished'
[2025-11-27 07:51:01] 2025-11-27 15:50:06,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:51:01] 2025-11-27 15:50:06,943 | INFO     | time since job start (80966s) is within the limit (172800.0s)
[2025-11-27 07:51:01] 2025-11-27 15:50:08,831 | INFO     | monitor loop #5226: job 0:6895343314 is in state 'finished'
[2025-11-27 07:51:01] 2025-11-27 15:50:08,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:51:01] 2025-11-27 15:50:08,951 | INFO     | time since job start (80968s) is within the limit (172800.0s)
[2025-11-27 07:51:01] 2025-11-27 15:50:10,961 | INFO     | time since job start (80970s) is within the limit (172800.0s)
[2025-11-27 07:51:01] 2025-11-27 15:50:11,334 | INFO     | monitor loop #5227: job 0:6895343314 is in state 'finished'
[2025-11-27 07:51:01] 2025-11-27 15:50:11,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:51:01] 2025-11-27 15:50:12,973 | INFO     | time since job start (80972s) is within the limit (172800.0s)
[2025-11-27 07:51:01] 2025-11-27 15:50:13,839 | INFO     | monitor loop #5228: job 0:6895343314 is in state 'finished'
[2025-11-27 07:51:01] 2025-11-27 15:50:13,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:51:01] 2025-11-27 15:50:14,881 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 07:51:01] 2025-11-27 15:50:14,887 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3249.78640625
[2025-11-27 07:51:01] 2025-11-27 15:50:14,898 | INFO     | using path: /var/lib/multiboinc/boinc228/slots/1/PanDA_Pilot-6895343314/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:51:01] 2025-11-27 15:50:14,899 | INFO     | extracted standard info from prmon json
[2025-11-27 07:51:01] 2025-11-27 15:50:14,899 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:51:01] 2025-11-27 15:50:14,899 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:51:01] 2025-11-27 15:50:14,939 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:51:01] 2025-11-27 15:50:14,941 | INFO     | sum of square deviations: 722953804480.9681
[2025-11-27 07:51:01] 2025-11-27 15:50:14,985 | INFO     | time since job start (80974s) is within the limit (172800.0s)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,025 | INFO     | sum of deviations: 2736345642453.3647
[2025-11-27 07:51:01] 2025-11-27 15:50:15,025 | INFO     | mean x: 1764218130.6244345
[2025-11-27 07:51:01] 2025-11-27 15:50:15,025 | INFO     | mean y: 3132587.322021116
[2025-11-27 07:51:01] 2025-11-27 15:50:15,025 | INFO     | intersect: -6674348828.710111
[2025-11-27 07:51:01] 2025-11-27 15:50:15,026 | INFO     | chi2: 16.114553250839656
[2025-11-27 07:51:01] 2025-11-27 15:50:15,031 | INFO     | sum of square deviations: 714807687379.4725
[2025-11-27 07:51:01] 2025-11-27 15:50:15,121 | INFO     | sum of deviations: 3219914068931.641
[2025-11-27 07:51:01] 2025-11-27 15:50:15,122 | INFO     | mean x: 1764217978.1362605
[2025-11-27 07:51:01] 2025-11-27 15:50:15,122 | INFO     | mean y: 3141637.7130961395
[2025-11-27 07:51:01] 2025-11-27 15:50:15,122 | INFO     | intersect: -7943933343.09553
[2025-11-27 07:51:01] 2025-11-27 15:50:15,126 | INFO     | chi2: 12.894050070480485
[2025-11-27 07:51:01] 2025-11-27 15:50:15,126 | INFO     | current chi2=12.894050070480485 (change=19.985060275818473 %)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,126 | INFO     | right removable region: 1320
[2025-11-27 07:51:01] 2025-11-27 15:50:15,128 | INFO     | sum of square deviations: 714805160149.472
[2025-11-27 07:51:01] 2025-11-27 15:50:15,200 | INFO     | sum of deviations: 2209713167308.196
[2025-11-27 07:51:01] 2025-11-27 15:50:15,201 | INFO     | mean x: 1764218283.1362605
[2025-11-27 07:51:01] 2025-11-27 15:50:15,201 | INFO     | mean y: 3142441.4822104466
[2025-11-27 07:51:01] 2025-11-27 15:50:15,201 | INFO     | intersect: -5450674329.282092
[2025-11-27 07:51:01] 2025-11-27 15:50:15,202 | INFO     | chi2: 12.715330432795277
[2025-11-27 07:51:01] 2025-11-27 15:50:15,202 | INFO     | current chi2=12.715330432795277 (change=21.094117628530974 %)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,202 | INFO     | left removable region: 10
[2025-11-27 07:51:01] 2025-11-27 15:50:15,207 | INFO     | sum of square deviations: 697097287201.5146
[2025-11-27 07:51:01] 2025-11-27 15:50:15,283 | INFO     | sum of deviations: 2410991732481.9727
[2025-11-27 07:51:01] 2025-11-27 15:50:15,283 | INFO     | mean x: 1764218252.6610687
[2025-11-27 07:51:01] 2025-11-27 15:50:15,284 | INFO     | mean y: 3160404.9503816795
[2025-11-27 07:51:01] 2025-11-27 15:50:15,284 | INFO     | intersect: -6098592821.683588
[2025-11-27 07:51:01] 2025-11-27 15:50:15,285 | INFO     | chi2: 7.30874412803436
[2025-11-27 07:51:01] 2025-11-27 15:50:15,285 | INFO     | current memory leak: 3.46 B/s (using 1310 data points, chi2=7.31)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,295 | INFO     | could have reported an average CPU frequency of 3249 MHz (48 samples)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | ..............................
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . Timing measurements:
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . get job = 0 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . initial setup = 4 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . payload setup = 20 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . stage-in = 0 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . payload execution = 80875 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . stage-out = 9 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | . log creation = 3 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,296 | INFO     | ..............................
[2025-11-27 07:51:01] 2025-11-27 15:50:15,521 | INFO     | 
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | job summary report
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | --------------------------------------------------
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | PanDA job id: 6895343314
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | task id: 47556137
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | errors: (none)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | pilot state: finished 
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | transexitcode: 0
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | exeerrorcode: 0
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | exeerrordiag: 
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | exitcode: 0
[2025-11-27 07:51:01] 2025-11-27 15:50:15,522 | INFO     | exitmsg: OK
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | cpuconsumptiontime: 215761 s
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | nevents: 1000
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | neventsw: 0
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | pid: 4083808
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | pgrp: 4083808
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | corecount: 10
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | event service: False
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | sizes: {0: 2283436, 1: 2284135, 2: 2284334, 13: 2284334, 19: 2284652, 24: 2284680, 80899: 2349250, 80910: 2358300, 80912: 2358356, 80935: 2358602}
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | --------------------------------------------------
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | 
[2025-11-27 07:51:01] 2025-11-27 15:50:15,523 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc228/slots/1
[2025-11-27 07:51:01] 2025-11-27 15:50:15,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,603 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:51:01] 2025-11-27 15:50:15,604 | INFO     | job 6895343314 has completed (purged errors)
[2025-11-27 07:51:01] 2025-11-27 15:50:15,604 | INFO     | overall cleanup function is called
[2025-11-27 07:51:01] 2025-11-27 15:50:16,691 | INFO     | --- collectZombieJob: --- 10, [4083808]
[2025-11-27 07:51:01] 2025-11-27 15:50:16,691 | INFO     | zombie collector waiting for pid 4083808
[2025-11-27 07:51:01] 2025-11-27 15:50:16,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:51:01] 2025-11-27 15:50:16,692 | INFO     | collected zombie processes
[2025-11-27 07:51:01] 2025-11-27 15:50:16,692 | INFO     | will attempt to kill all subprocesses of pid=4083808
[2025-11-27 07:51:01] 2025-11-27 15:50:17,782 | INFO     | process IDs to be killed: [4083808] (in reverse order)
[2025-11-27 07:51:01] 2025-11-27 15:50:18,215 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:51:01] 2025-11-27 15:50:18,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:51:01] 2025-11-27 15:50:18,245 | INFO     | did not find any defunct processes belonging to 4083808
[2025-11-27 07:51:01] 2025-11-27 15:50:18,281 | INFO     | did not find any defunct processes belonging to 4083808
[2025-11-27 07:51:01] 2025-11-27 15:50:18,294 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:51:01] 2025-11-27 15:50:18,294 | INFO     | ready for new job
[2025-11-27 07:51:01] 2025-11-27 15:50:18,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:51:01] 2025-11-27 15:50:18,313 | INFO     | ***************************************
[2025-11-27 07:51:01] 2025-11-27 15:50:18,313 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:51:01] 2025-11-27 15:50:18,313 | INFO     | ***************************************
[2025-11-27 07:51:01] 2025-11-27 15:50:18,313 | INFO     | 
[2025-11-27 07:51:01] 2025-11-27 15:50:18,315 | INFO     | architecture information:
[2025-11-27 07:51:01] 2025-11-27 15:50:18,321 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:51:01] 2025-11-27 15:50:18,375 | INFO     | cat /etc/os-release:
[2025-11-27 07:51:01] NAME="CentOS Linux"
[2025-11-27 07:51:01] VERSION="7 (Core)"
[2025-11-27 07:51:01] ID="centos"
[2025-11-27 07:51:01] ID_LIKE="rhel fedora"
[2025-11-27 07:51:01] VERSION_ID="7"
[2025-11-27 07:51:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:51:01] ANSI_COLOR="0;31"
[2025-11-27 07:51:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:51:01] HOME_URL="https://www.centos.org/"
[2025-11-27 07:51:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:51:01] 
[2025-11-27 07:51:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:51:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:51:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:51:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:51:01] 
[2025-11-27 07:51:01] 2025-11-27 15:50:18,375 | INFO     | ***************************************
[2025-11-27 07:51:01] 2025-11-27 15:50:18,883 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc228/slots/1
[2025-11-27 07:51:01] 2025-11-27 15:50:18,944 | INFO     | sufficient remaining disk space (66857205760 B)
[2025-11-27 07:51:01] 2025-11-27 15:50:18,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:51:01] 2025-11-27 15:50:18,944 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:51:01] 2025-11-27 15:50:18,944 | INFO     | update_server=False
[2025-11-27 07:51:01] 2025-11-27 15:50:18,944 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:51:01] 2025-11-27 15:50:18,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:51:01] 2025-11-27 15:50:18,984 | INFO     | all data control threads have been joined
[2025-11-27 07:51:01] 2025-11-27 15:50:19,317 | INFO     | all payload control threads have been joined
[2025-11-27 07:51:01] 2025-11-27 15:50:19,610 | INFO     | all job control threads have been joined
[2025-11-27 07:51:01] 2025-11-27 15:50:19,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:51:01] 2025-11-27 15:50:19,858 | INFO     | aborting loop
[2025-11-27 07:51:01] 2025-11-27 15:50:19,954 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:19,989 | INFO     | [data] control thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,236 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,322 | INFO     | [payload] control thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:51:01] 2025-11-27 15:50:20,591 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,607 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,608 | INFO     | [job] validate thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,608 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,615 | INFO     | [job] control thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,773 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,818 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,864 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,949 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:20,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:51:01] 2025-11-27 15:50:21,551 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:24,994 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:51:01] 2025-11-27 15:50:39,071 [wrapper] supervise_pilot (15 min periods counter: 91)
[2025-11-27 07:51:01] 2025-11-27 15:50:49,157 | INFO     | PID=4073554 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:51:01] 2025-11-27 15:50:49,157 | INFO     | .. there are 12 such processes running
[2025-11-27 07:51:01] 2025-11-27 15:50:49,158 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:51:01] 2025-11-27 15:50:49,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:51:01] 2025-11-27 15:50:49,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:51:01] 2025-11-27 15:50:55,348 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:51:01] 2025-11-27 15:50:55,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125648778815296)>', '<ExcThread(monitor, started 125647993173760)>']
[2025-11-27 07:51:01] 2025-11-27 15:50:56,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:51:01] 2025-11-27 15:50:56,200 | INFO     | [monitor] control thread has ended
[2025-11-27 07:51:01] 2025-11-27 15:51:00,519 | INFO     | all workflow threads have been joined
[2025-11-27 07:51:01] 2025-11-27 15:51:00,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:51:01] 2025-11-27 15:51:00,520 | INFO     | traces error code: 0
[2025-11-27 07:51:01] 2025-11-27 15:51:00,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:51:01] 2025-11-27 15:51:01,038 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:51:01] 2025-11-27 15:51:01,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:51:01] 2025-11-27 15:51:01,087 [wrapper] pilotpid: 4073554
[2025-11-27 07:51:01] 2025-11-27 15:51:01,105 [wrapper] Pilot exit status: 0
[2025-11-27 07:51:01] 2025-11-27 15:51:01,157 [wrapper] pandaids: 6895343314
[2025-11-27 07:51:01] 2025-11-27 15:51:01,440 [wrapper] cleanup supervisor_pilot 1359481 4073555
[2025-11-27 07:51:01] 2025-11-27 15:51:01,454 [wrapper] Test setup, not cleaning
[2025-11-27 07:51:01] 2025-11-27 15:51:01,475 [wrapper] apfmon messages muted
[2025-11-27 07:51:01] 2025-11-27 15:51:01,493 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:51:01] 2025-11-27 15:51:01,503 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:51:01]  *** Error codes and diagnostics ***
[2025-11-27 07:51:01]     "exeErrorCode": 0,
[2025-11-27 07:51:01]     "exeErrorDiag": "",
[2025-11-27 07:51:01]     "pilotErrorCode": 0,
[2025-11-27 07:51:01]     "pilotErrorDiag": "",
[2025-11-27 07:51:01]  *** Listing of results directory ***
[2025-11-27 07:51:01] total 1332560
[2025-11-27 07:51:01] -rw-r--r-- 1 root root    576529 Nov 22 07:48 pilot3.tar.gz
[2025-11-27 07:51:01] -rw-r--r-- 1 root root      5112 Nov 22 08:05 queuedata.json
[2025-11-27 07:51:01] -rwx------ 1 4871 1028     36292 Nov 22 08:05 runpilot2-wrapper.sh
[2025-11-27 07:51:01] -rw-r--r-- 1 root root       100 Nov 26 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:51:01] -rwxr-xr-x 1 root root      7986 Nov 26 09:20 run_atlas
[2025-11-27 07:51:01] -rw-r--r-- 1 root root       105 Nov 26 09:20 job.xml
[2025-11-27 07:51:01] -rw-r--r-- 2 root root 412112839 Nov 26 09:20 EVNT.47483658._000422.pool.root.1
[2025-11-27 07:51:01] -rw-r--r-- 2 root root    590107 Nov 26 09:20 input.tar.gz
[2025-11-27 07:51:01] drwxrwx--x 2 root root      4096 Nov 26 09:20 shared
[2025-11-27 07:51:01] -rw-r--r-- 2 root root     15847 Nov 26 09:20 start_atlas.sh
[2025-11-27 07:51:01] -rw-r--r-- 1 root root         0 Nov 26 09:20 boinc_setup_complete
[2025-11-27 07:51:01] -rw-r--r-- 1 root root         0 Nov 26 09:20 boinc_lockfile
[2025-11-27 07:51:01] -rw-r--r-- 1 root root      2785 Nov 26 09:20 pandaJob.out
[2025-11-27 07:51:01] -rw------- 1 root root    991530 Nov 26 09:20 agis_schedconf.cvmfs.json
[2025-11-27 07:51:01] drwxr-xr-x 5  320  320      4096 Nov 26 09:20 pilot3
[2025-11-27 07:51:01] -rw-r--r-- 1 root root      9243 Nov 26 20:22 init_data.xml
[2025-11-27 07:51:01] -rw-r--r-- 1 root root       533 Nov 27 07:18 boinc_task_state.xml
[2025-11-27 07:51:01] -rw------- 1 root root 921226235 Nov 27 07:48 HITS.47556137._004176.pool.root.1
[2025-11-27 07:51:01] -rw------- 1 root root      1048 Nov 27 07:49 memory_monitor_summary.json
[2025-11-27 07:51:01] -rw------- 1 root root   1516240 Nov 27 07:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:51:01] -rw------- 1 root root   2646516 Nov 27 07:49 log.47556137._004176.job.log.tgz.1
[2025-11-27 07:51:01] -rw------- 1 root root        95 Nov 27 07:50 pilot_heartbeat.json
[2025-11-27 07:51:01] -rw------- 1 root root      8604 Nov 27 07:50 heartbeat.json
[2025-11-27 07:51:01] -rw-r--r-- 1 root root      8192 Nov 27 07:50 boinc_mmap_file
[2025-11-27 07:51:01] -rw-r--r-- 1 root root        29 Nov 27 07:50 wrapper_checkpoint.txt
[2025-11-27 07:51:01] -rw------- 1 root root      4838 Nov 27 07:51 pilotlog.txt
[2025-11-27 07:51:01] -rw------- 1 root root  10990847 Nov 27 07:51 log.47556137._004176.job.log.1
[2025-11-27 07:51:01] -rw------- 1 root root       353 Nov 27 07:51 output.list
[2025-11-27 07:51:01] -rw-r--r-- 1 root root       620 Nov 27 07:51 runtime_log
[2025-11-27 07:51:01] -rw------- 1 root root  13660160 Nov 27 07:51 result.tar.gz
[2025-11-27 07:51:01] -rw-r--r-- 1 root root      9021 Nov 27 07:51 runtime_log.err
[2025-11-27 07:51:01] -rw------- 1 root root       662 Nov 27 07:51 n5JMDm9H5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaFKKDm8K7L8n.diag
[2025-11-27 07:51:01] -rw-r--r-- 1 root root     21884 Nov 27 07:51 stderr.txt
[2025-11-27 07:51:01] HITS file was successfully produced:
[2025-11-27 07:51:01] -rw------- 1 root root 921226235 Nov 27 07:48 shared/HITS.pool.root.1
[2025-11-27 07:51:01]  *** Contents of shared directory: ***
[2025-11-27 07:51:01] total 1316036
[2025-11-27 07:51:01] -rw-r--r-- 2 root root 412112839 Nov 26 09:20 ATLAS.root_0
[2025-11-27 07:51:01] -rw-r--r-- 2 root root    590107 Nov 26 09:20 input.tar.gz
[2025-11-27 07:51:01] -rw-r--r-- 2 root root     15847 Nov 26 09:20 start_atlas.sh
[2025-11-27 07:51:01] -rw------- 1 root root 921226235 Nov 27 07:48 HITS.pool.root.1
[2025-11-27 07:51:01] -rw------- 1 root root  13660160 Nov 27 07:51 result.tar.gz
07:51:03 (4068811): run_atlas exited; CPU time 216305.196540
07:51:03 (4068811): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN