Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:24:22 (20689): wrapper (7.7.26015): starting
22:24:22 (20689): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 22:24:22] Arguments: --nthreads 12
[2025-11-24 22:24:22] Threads: 12
[2025-11-24 22:24:22] Checking for CVMFS
[2025-11-24 22:24:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:24:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:24:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:24:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:24:22] 2.11.2.0 14820 141042 91628 153268 1 81 15110295 20275201 1 130560 0 68685185 99.962 5669713 35941 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 22:24:22] CVMFS is ok
[2025-11-24 22:24:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:24:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:24:22] Further information can be found at the LHC@home message board.
[2025-11-24 22:24:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:24:22] Checking for apptainer binary...
[2025-11-24 22:24:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:24:22] Running /usr/bin/apptainer --version
[2025-11-24 22:24:22] apptainer version 1.3.2-1.el7
[2025-11-24 22:24:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:24:24] c-205-27.aglt2.org
[2025-11-24 22:24:24] apptainer works
[2025-11-24 22:24:24] Set ATHENA_PROC_NUMBER=12
[2025-11-24 22:24:24] Set ATHENA_CORE_NUMBER=12
[2025-11-24 22:24:24] Starting ATLAS job with PandaID=6895355687
[2025-11-24 22:24:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 05:34:27]  *** The last 200 lines of the pilot log: ***
[2025-11-25 05:34:27] 2025-11-25 10:33:44,684 | INFO     | time since job start (25745s) is within the limit (172800.0s)
[2025-11-25 05:34:27] 2025-11-25 10:33:45,024 | INFO     | monitor loop #1926: job 0:6895355687 is in state 'finished'
[2025-11-25 05:34:27] 2025-11-25 10:33:45,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 05:34:27] 2025-11-25 10:33:46,689 | INFO     | time since job start (25747s) is within the limit (172800.0s)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,090 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 05:34:27] 2025-11-25 10:33:47,094 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-25 05:34:27] 2025-11-25 10:33:47,097 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895355687/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,097 | INFO     | extracted standard info from prmon json
[2025-11-25 05:34:27] 2025-11-25 10:33:47,098 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 05:34:27] 2025-11-25 10:33:47,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 05:34:27] 2025-11-25 10:33:47,104 | INFO     | fitting pss+swap vs Time
[2025-11-25 05:34:27] 2025-11-25 10:33:47,105 | INFO     | sum of square deviations: 23303037218.711014
[2025-11-25 05:34:27] 2025-11-25 10:33:47,109 | INFO     | sum of deviations: 295769929197.3883
[2025-11-25 05:34:27] 2025-11-25 10:33:47,109 | INFO     | mean x: 1764053948.687204
[2025-11-25 05:34:27] 2025-11-25 10:33:47,109 | INFO     | mean y: 3428650.609004739
[2025-11-25 05:34:27] 2025-11-25 10:33:47,109 | INFO     | intersect: -22386533078.699337
[2025-11-25 05:34:27] 2025-11-25 10:33:47,110 | INFO     | chi2: 6.436626109044384
[2025-11-25 05:34:27] 2025-11-25 10:33:47,110 | INFO     | sum of square deviations: 22484525036.033573
[2025-11-25 05:34:27] 2025-11-25 10:33:47,114 | INFO     | sum of deviations: 473412156279.27795
[2025-11-25 05:34:27] 2025-11-25 10:33:47,114 | INFO     | mean x: 1764053796.1894484
[2025-11-25 05:34:27] 2025-11-25 10:33:47,114 | INFO     | mean y: 3461721.426858513
[2025-11-25 05:34:27] 2025-11-25 10:33:47,114 | INFO     | intersect: -37138728745.497696
[2025-11-25 05:34:27] 2025-11-25 10:33:47,115 | INFO     | chi2: 2.855681885751208
[2025-11-25 05:34:27] 2025-11-25 10:33:47,115 | INFO     | current chi2=2.855681885751208 (change=55.63387033249353 %)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,115 | INFO     | sum of square deviations: 21685408565.852192
[2025-11-25 05:34:27] 2025-11-25 10:33:47,119 | INFO     | sum of deviations: 526566018283.4298
[2025-11-25 05:34:27] 2025-11-25 10:33:47,119 | INFO     | mean x: 1764053643.6917477
[2025-11-25 05:34:27] 2025-11-25 10:33:47,119 | INFO     | mean y: 3471830.8616504855
[2025-11-25 05:34:27] 2025-11-25 10:33:47,119 | INFO     | intersect: -42831354194.03766
[2025-11-25 05:34:27] 2025-11-25 10:33:47,120 | INFO     | chi2: 2.3591161275006156
[2025-11-25 05:34:27] 2025-11-25 10:33:47,120 | INFO     | current chi2=2.3591161275006156 (change=17.3886930728619 %)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,120 | INFO     | right removable region: 411
[2025-11-25 05:34:27] 2025-11-25 10:33:47,120 | INFO     | sum of square deviations: 22484476846.033573
[2025-11-25 05:34:27] 2025-11-25 10:33:47,124 | INFO     | sum of deviations: 164846169447.58743
[2025-11-25 05:34:27] 2025-11-25 10:33:47,124 | INFO     | mean x: 1764054101.1894484
[2025-11-25 05:34:27] 2025-11-25 10:33:47,124 | INFO     | mean y: 3452954.815347722
[2025-11-25 05:34:27] 2025-11-25 10:33:47,124 | INFO     | intersect: -12929805989.596615
[2025-11-25 05:34:27] 2025-11-25 10:33:47,125 | INFO     | chi2: 4.233419248826711
[2025-11-25 05:34:27] 2025-11-25 10:33:47,125 | INFO     | current chi2=4.233419248826711 (change=34.229219204170505 %)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,126 | INFO     | sum of square deviations: 21685337378.233055
[2025-11-25 05:34:27] 2025-11-25 10:33:47,129 | INFO     | sum of deviations: 132691522550.60167
[2025-11-25 05:34:27] 2025-11-25 10:33:47,129 | INFO     | mean x: 1764054253.6893203
[2025-11-25 05:34:27] 2025-11-25 10:33:47,130 | INFO     | mean y: 3459083.86407767
[2025-11-25 05:34:27] 2025-11-25 10:33:47,130 | INFO     | intersect: -10790702920.682697
[2025-11-25 05:34:27] 2025-11-25 10:33:47,130 | INFO     | chi2: 4.1739579354996845
[2025-11-25 05:34:27] 2025-11-25 10:33:47,130 | INFO     | current chi2=4.1739579354996845 (change=1.4045694468721936 %)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,130 | INFO     | left removable region: 20
[2025-11-25 05:34:27] 2025-11-25 10:33:47,131 | INFO     | sum of square deviations: 18535578158.61382
[2025-11-25 05:34:27] 2025-11-25 10:33:47,134 | INFO     | sum of deviations: 322256420490.458
[2025-11-25 05:34:27] 2025-11-25 10:33:47,134 | INFO     | mean x: 1764054223.1918159
[2025-11-25 05:34:27] 2025-11-25 10:33:47,135 | INFO     | mean y: 3511527.58056266
[2025-11-25 05:34:27] 2025-11-25 10:33:47,135 | INFO     | intersect: -30666036228.214046
[2025-11-25 05:34:27] 2025-11-25 10:33:47,135 | INFO     | chi2: 0.031045081342645928
[2025-11-25 05:34:27] 2025-11-25 10:33:47,135 | INFO     | current memory leak: 17.39 B/s (using 391 data points, chi2=0.03)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,136 | INFO     | could have reported an average CPU frequency of 2354 MHz (18 samples)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,136 | INFO     | ..............................
[2025-11-25 05:34:27] 2025-11-25 10:33:47,136 | INFO     | . Timing measurements:
[2025-11-25 05:34:27] 2025-11-25 10:33:47,136 | INFO     | . get job = 0 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,136 | INFO     | . initial setup = 2 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,136 | INFO     | . payload setup = 7 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,136 | INFO     | . stage-in = 0 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,137 | INFO     | . payload execution = 25711 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,137 | INFO     | . stage-out = 3 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,137 | INFO     | . log creation = 0 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,137 | INFO     | ..............................
[2025-11-25 05:34:27] 2025-11-25 10:33:47,264 | INFO     | 
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | job summary report
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | --------------------------------------------------
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | PanDA job id: 6895355687
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | task id: 47556137
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | errors: (none)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | pilot state: finished 
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | transexitcode: 0
[2025-11-25 05:34:27] 2025-11-25 10:33:47,265 | INFO     | exeerrorcode: 0
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | exeerrordiag: 
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | exitcode: 0
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | exitmsg: OK
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | cpuconsumptiontime: 294950 s
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | nevents: 1000
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | neventsw: 0
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | pid: 30898
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | pgrp: 30898
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | corecount: 12
[2025-11-25 05:34:27] 2025-11-25 10:33:47,266 | INFO     | event service: False
[2025-11-25 05:34:27] 2025-11-25 10:33:47,267 | INFO     | sizes: {0: 2284088, 1: 2284287, 6: 2284549, 12: 2284577, 25722: 2321786, 25727: 2330969, 25732: 2331159}
[2025-11-25 05:34:27] 2025-11-25 10:33:47,267 | INFO     | --------------------------------------------------
[2025-11-25 05:34:27] 2025-11-25 10:33:47,267 | INFO     | 
[2025-11-25 05:34:27] 2025-11-25 10:33:47,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 05:34:27] 2025-11-25 10:33:47,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 05:34:27] 2025-11-25 10:33:47,294 | INFO     | job 6895355687 has completed (purged errors)
[2025-11-25 05:34:27] 2025-11-25 10:33:47,294 | INFO     | overall cleanup function is called
[2025-11-25 05:34:27] 2025-11-25 10:33:48,310 | INFO     | --- collectZombieJob: --- 10, [30898]
[2025-11-25 05:34:27] 2025-11-25 10:33:48,311 | INFO     | zombie collector waiting for pid 30898
[2025-11-25 05:34:27] 2025-11-25 10:33:48,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 05:34:27] 2025-11-25 10:33:48,311 | INFO     | collected zombie processes
[2025-11-25 05:34:27] 2025-11-25 10:33:48,311 | INFO     | will attempt to kill all subprocesses of pid=30898
[2025-11-25 05:34:27] 2025-11-25 10:33:48,402 | INFO     | process IDs to be killed: [30898] (in reverse order)
[2025-11-25 05:34:27] 2025-11-25 10:33:48,453 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 05:34:27] 2025-11-25 10:33:48,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 05:34:27] 2025-11-25 10:33:48,457 | INFO     | did not find any defunct processes belonging to 30898
[2025-11-25 05:34:27] 2025-11-25 10:33:48,459 | INFO     | did not find any defunct processes belonging to 30898
[2025-11-25 05:34:27] 2025-11-25 10:33:48,461 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 05:34:27] 2025-11-25 10:33:48,462 | INFO     | ready for new job
[2025-11-25 05:34:27] 2025-11-25 10:33:48,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 05:34:27] 2025-11-25 10:33:48,464 | INFO     | ***************************************
[2025-11-25 05:34:27] 2025-11-25 10:33:48,464 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 05:34:27] 2025-11-25 10:33:48,464 | INFO     | ***************************************
[2025-11-25 05:34:27] 2025-11-25 10:33:48,464 | INFO     | 
[2025-11-25 05:34:27] 2025-11-25 10:33:48,465 | INFO     | architecture information:
[2025-11-25 05:34:27] 2025-11-25 10:33:48,465 | INFO     | executing command: cat /etc/os-release
[2025-11-25 05:34:27] 2025-11-25 10:33:48,482 | INFO     | cat /etc/os-release:
[2025-11-25 05:34:27] NAME="CentOS Linux"
[2025-11-25 05:34:27] VERSION="7 (Core)"
[2025-11-25 05:34:27] ID="centos"
[2025-11-25 05:34:27] ID_LIKE="rhel fedora"
[2025-11-25 05:34:27] VERSION_ID="7"
[2025-11-25 05:34:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 05:34:27] ANSI_COLOR="0;31"
[2025-11-25 05:34:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 05:34:27] HOME_URL="https://www.centos.org/"
[2025-11-25 05:34:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 05:34:27] 
[2025-11-25 05:34:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 05:34:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 05:34:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 05:34:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 05:34:27] 
[2025-11-25 05:34:27] 2025-11-25 10:33:48,482 | INFO     | ***************************************
[2025-11-25 05:34:27] 2025-11-25 10:33:48,985 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 05:34:27] 2025-11-25 10:33:49,001 | INFO     | sufficient remaining disk space (28253880320 B)
[2025-11-25 05:34:27] 2025-11-25 10:33:49,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 05:34:27] 2025-11-25 10:33:49,002 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 05:34:27] 2025-11-25 10:33:49,002 | INFO     | update_server=False
[2025-11-25 05:34:27] 2025-11-25 10:33:49,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 05:34:27] 2025-11-25 10:33:49,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:34:27] 2025-11-25 10:33:49,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 05:34:27] 2025-11-25 10:33:49,003 | INFO     | aborting loop
[2025-11-25 05:34:27] 2025-11-25 10:33:49,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:34:27] 2025-11-25 10:33:49,384 | INFO     | all data control threads have been joined
[2025-11-25 05:34:27] 2025-11-25 10:33:49,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 05:34:27] 2025-11-25 10:33:49,948 | INFO     | all job control threads have been joined
[2025-11-25 05:34:27] 2025-11-25 10:33:50,008 | INFO     | [job] retrieve thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,009 | INFO     | [job] job monitor thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,010 | INFO     | [job] queue monitor thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,018 | INFO     | [job] validate thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,124 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,388 | INFO     | [data] control thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,426 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,440 | INFO     | all payload control threads have been joined
[2025-11-25 05:34:27] 2025-11-25 10:33:50,633 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,953 | INFO     | [job] control thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:50,997 | INFO     | [payload] validate_post thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:51,157 | INFO     | [data] copytool_in thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:51,383 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:51,445 | INFO     | [payload] control thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:51,446 | INFO     | [payload] failed_post thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:51,617 | INFO     | [data] copytool_out thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:33:53,009 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 05:34:27] 2025-11-25 10:34:19,893 | INFO     | PID=24372 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 05:34:27] 2025-11-25 10:34:19,893 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 05:34:27] 2025-11-25 10:34:19,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 05:34:27] 2025-11-25 10:34:19,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 05:34:27] 2025-11-25 10:34:20,764 | INFO     | [monitor] cgroup control has ended
[2025-11-25 05:34:27] 2025-11-25 10:34:22,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673658926912)>', '<ExcThread(monitor, started 139672873334528)>']
[2025-11-25 05:34:27] 2025-11-25 10:34:22,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 05:34:27] 2025-11-25 10:34:22,909 | INFO     | [monitor] control thread has ended
[2025-11-25 05:34:27] 2025-11-25 10:34:27,667 | INFO     | all workflow threads have been joined
[2025-11-25 05:34:27] 2025-11-25 10:34:27,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 05:34:27] 2025-11-25 10:34:27,668 | INFO     | traces error code: 0
[2025-11-25 05:34:27] 2025-11-25 10:34:27,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 05:34:27] 2025-11-25 10:34:27,753 [wrapper] ==== pilot stdout END ====
[2025-11-25 05:34:27] 2025-11-25 10:34:27,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 05:34:27] 2025-11-25 10:34:27,760 [wrapper] pilotpid: 24372
[2025-11-25 05:34:27] 2025-11-25 10:34:27,764 [wrapper] Pilot exit status: 0
[2025-11-25 05:34:27] 2025-11-25 10:34:27,779 [wrapper] pandaids: 6895355687
[2025-11-25 05:34:27] 2025-11-25 10:34:27,816 [wrapper] cleanup supervisor_pilot 18429 24373
[2025-11-25 05:34:27] 2025-11-25 10:34:27,820 [wrapper] Test setup, not cleaning
[2025-11-25 05:34:27] 2025-11-25 10:34:27,824 [wrapper] apfmon messages muted
[2025-11-25 05:34:27] 2025-11-25 10:34:27,828 [wrapper] ==== wrapper stdout END ====
[2025-11-25 05:34:27] 2025-11-25 10:34:27,832 [wrapper] ==== wrapper stderr END ====
[2025-11-25 05:34:27]  *** Error codes and diagnostics ***
[2025-11-25 05:34:27]     "exeErrorCode": 0,
[2025-11-25 05:34:27]     "exeErrorDiag": "",
[2025-11-25 05:34:27]     "pilotErrorCode": 0,
[2025-11-25 05:34:27]     "pilotErrorDiag": "",
[2025-11-25 05:34:27]  *** Listing of results directory ***
[2025-11-25 05:34:27] total 1306344
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 03:03 pilot3.tar.gz
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 03:15 queuedata.json
[2025-11-25 05:34:27] -rwx------ 1 boincer umatlas     36292 Nov 23 03:15 runpilot2-wrapper.sh
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas       100 Nov 24 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 05:34:27] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 22:24 run_atlas
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas       105 Nov 24 22:24 job.xml
[2025-11-25 05:34:27] -rw-r--r-- 2 boincer umatlas 410240486 Nov 24 22:24 EVNT.47483658._000669.pool.root.1
[2025-11-25 05:34:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 22:24 start_atlas.sh
[2025-11-25 05:34:27] drwxrwx--x 2 boincer umatlas      4096 Nov 24 22:24 shared
[2025-11-25 05:34:27] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 22:24 input.tar.gz
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas         0 Nov 24 22:24 boinc_lockfile
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 22:24 pandaJob.out
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas        57 Nov 24 22:24 setup.sh.local
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas    991801 Nov 24 22:24 agis_schedconf.cvmfs.json
[2025-11-25 05:34:27] drwx------ 5 boincer umatlas      4096 Nov 24 22:24 pilot3
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas       532 Nov 25 05:23 boinc_task_state.xml
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 05:29 init_data.xml
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas 911963919 Nov 25 05:33 HITS.47556137._006650.pool.root.1
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas      1065 Nov 25 05:33 memory_monitor_summary.json
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas   1516240 Nov 25 05:33 agis_ddmendpoints.agis.ALL.json
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas   2181400 Nov 25 05:33 log.47556137._006650.job.log.tgz.1
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas      8668 Nov 25 05:33 heartbeat.json
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas        95 Nov 25 05:33 pilot_heartbeat.json
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 05:33 boinc_mmap_file
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas        29 Nov 25 05:33 wrapper_checkpoint.txt
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas      4746 Nov 25 05:34 pilotlog.txt
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas   3601596 Nov 25 05:34 log.47556137._006650.job.log.1
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas       353 Nov 25 05:34 output.list
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas       620 Nov 25 05:34 runtime_log
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas   5806080 Nov 25 05:34 result.tar.gz
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas       670 Nov 25 05:34 ubdKDm7QKh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFUIKDm9Szj1n.diag
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 05:34 runtime_log.err
[2025-11-25 05:34:27] -rw-r--r-- 1 boincer umatlas     21309 Nov 25 05:34 stderr.txt
[2025-11-25 05:34:27] HITS file was successfully produced:
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas 911963919 Nov 25 05:33 shared/HITS.pool.root.1
[2025-11-25 05:34:27]  *** Contents of shared directory: ***
[2025-11-25 05:34:27] total 1297492
[2025-11-25 05:34:27] -rw-r--r-- 2 boincer umatlas 410240486 Nov 24 22:24 ATLAS.root_0
[2025-11-25 05:34:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 22:24 start_atlas.sh
[2025-11-25 05:34:27] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 22:24 input.tar.gz
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas 911963919 Nov 25 05:33 HITS.pool.root.1
[2025-11-25 05:34:27] -rw------- 1 boincer umatlas   5806080 Nov 25 05:34 result.tar.gz
05:34:29 (20689): run_atlas exited; CPU time 288561.366204
05:34:29 (20689): called boinc_finish(0)

</stderr_txt>
]]>

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