Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:12 (1995183): wrapper (7.7.26015): starting
00:01:12 (1995183): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:01:12] Arguments: --nthreads 9
[2025-11-25 00:01:12] Threads: 9
[2025-11-25 00:01:12] Checking for CVMFS
[2025-11-25 00:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:01:13] 2.13.3.0 11314 28164 246716 153270 1 600 17318719 32935936 56812 16776704 0 208232247 99.641 203090555 33802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:01:13] CVMFS is ok
[2025-11-25 00:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:01:13] Further information can be found at the LHC@home message board.
[2025-11-25 00:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:01:13] Checking for apptainer binary...
[2025-11-25 00:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:01:13] Running /usr/bin/apptainer --version
[2025-11-25 00:01:13] apptainer version 1.4.4-1.el9
[2025-11-25 00:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:01:13] c7-2-10.aglt2.org
[2025-11-25 00:01:13] apptainer works
[2025-11-25 00:01:13] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:01:13] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:01:13] Starting ATLAS job with PandaID=6895365717
[2025-11-25 00:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:33:18]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:33:18] 2025-11-25 20:32:25,848 | INFO     | sum of square deviations: 233667120259.5614
[2025-11-25 15:33:18] 2025-11-25 20:32:25,857 | INFO     | size of work directory /tmp/boinchome/slots/5/PanDA_Pilot-6895365717: 8984806 B (within 2537553920 B limit)
[2025-11-25 15:33:18] 2025-11-25 20:32:25,857 | INFO     | pfn file=/tmp/boinchome/slots/5/PanDA_Pilot-6895365717/HITS.47556149._001669.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-25 15:33:18] 2025-11-25 20:32:25,857 | INFO     | total size of present files: 0 B (workdir size: 8984806 B)
[2025-11-25 15:33:18] 2025-11-25 20:32:25,857 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-6895365717/HITS.47556149._001669.pool.root.1 since it does not exist
[2025-11-25 15:33:18] 2025-11-25 20:32:25,866 | INFO     | sum of deviations: 2230284753318.07
[2025-11-25 15:33:18] 2025-11-25 20:32:25,873 | INFO     | mean x: 1764074649.4538462
[2025-11-25 15:33:18] 2025-11-25 20:32:25,874 | INFO     | mean y: 3064773.108791209
[2025-11-25 15:33:18] 2025-11-25 20:32:25,874 | INFO     | intersect: -16834515071.33593
[2025-11-25 15:33:18] 2025-11-25 20:32:25,874 | INFO     | chi2: 4.1578880719510805
[2025-11-25 15:33:18] 2025-11-25 20:32:25,874 | INFO     | current chi2=4.1578880719510805 (change=44.366199429041856 %)
[2025-11-25 15:33:18] 2025-11-25 20:32:25,889 | INFO     | sum of square deviations: 229836810847.48816
[2025-11-25 15:33:18] 2025-11-25 20:32:25,959 | INFO     | sum of deviations: 2435926170901.201
[2025-11-25 15:33:18] 2025-11-25 20:32:25,959 | INFO     | mean x: 1764074496.959116
[2025-11-25 15:33:18] 2025-11-25 20:32:25,959 | INFO     | mean y: 3072949.2486187844
[2025-11-25 15:33:18] 2025-11-25 20:32:25,959 | INFO     | intersect: -18693476218.471634
[2025-11-25 15:33:18] 2025-11-25 20:32:25,960 | INFO     | chi2: 2.5095674388846607
[2025-11-25 15:33:18] 2025-11-25 20:32:25,960 | INFO     | current chi2=2.5095674388846607 (change=39.64321801219023 %)
[2025-11-25 15:33:18] 2025-11-25 20:32:25,961 | INFO     | sum of square deviations: 226048485205.7155
[2025-11-25 15:33:18] 2025-11-25 20:32:25,977 | INFO     | sum of deviations: 2439077377661.7256
[2025-11-25 15:33:18] 2025-11-25 20:32:25,977 | INFO     | mean x: 1764074344.4622223
[2025-11-25 15:33:18] 2025-11-25 20:32:25,977 | INFO     | mean y: 3073072.447777778
[2025-11-25 15:33:18] 2025-11-25 20:32:25,977 | INFO     | intersect: -19031400094.56132
[2025-11-25 15:33:18] 2025-11-25 20:32:25,978 | INFO     | chi2: 2.4462180060900396
[2025-11-25 15:33:18] 2025-11-25 20:32:25,978 | INFO     | current chi2=2.4462180060900396 (change=2.5243168130510902 %)
[2025-11-25 15:33:18] 2025-11-25 20:32:25,978 | INFO     | right removable region: 899
[2025-11-25 15:33:18] 2025-11-25 20:32:25,979 | INFO     | sum of square deviations: 233666646351.46997
[2025-11-25 15:33:18] 2025-11-25 20:32:25,999 | INFO     | sum of deviations: 1633653049833.0242
[2025-11-25 15:33:18] 2025-11-25 20:32:26,000 | INFO     | mean x: 1764074954.4527473
[2025-11-25 15:33:18] 2025-11-25 20:32:26,000 | INFO     | mean y: 3062015.0703296703
[2025-11-25 15:33:18] 2025-11-25 20:32:26,000 | INFO     | intersect: -12330261865.227892
[2025-11-25 15:33:18] 2025-11-25 20:32:26,001 | INFO     | chi2: 5.283033516196852
[2025-11-25 15:33:18] 2025-11-25 20:32:26,001 | INFO     | current chi2=5.283033516196852 (change=29.311412918370277 %)
[2025-11-25 15:33:18] 2025-11-25 20:32:26,001 | INFO     | sum of square deviations: 229836029564.05066
[2025-11-25 15:33:18] 2025-11-25 20:32:26,020 | INFO     | sum of deviations: 1555820072467.8079
[2025-11-25 15:33:18] 2025-11-25 20:32:26,021 | INFO     | mean x: 1764075106.953591
[2025-11-25 15:33:18] 2025-11-25 20:32:26,021 | INFO     | mean y: 3065113.566850829
[2025-11-25 15:33:18] 2025-11-25 20:32:26,021 | INFO     | intersect: -11938419717.793465
[2025-11-25 15:33:18] 2025-11-25 20:32:26,022 | INFO     | chi2: 5.21400296226297
[2025-11-25 15:33:18] 2025-11-25 20:32:26,022 | INFO     | current chi2=5.21400296226297 (change=1.306646147942201 %)
[2025-11-25 15:33:18] 2025-11-25 20:32:26,022 | INFO     | left removable region: 20
[2025-11-25 15:33:18] 2025-11-25 20:32:26,023 | INFO     | sum of square deviations: 210591855033.9929
[2025-11-25 15:33:18] 2025-11-25 20:32:26,041 | INFO     | sum of deviations: 1974179032448.5413
[2025-11-25 15:33:18] 2025-11-25 20:32:26,041 | INFO     | mean x: 1764074923.9522185
[2025-11-25 15:33:18] 2025-11-25 20:32:26,041 | INFO     | mean y: 3091747.108077361
[2025-11-25 15:33:18] 2025-11-25 20:32:26,041 | INFO     | intersect: -16534108734.70817
[2025-11-25 15:33:18] 2025-11-25 20:32:26,041 | INFO     | chi2: 0.11651710366793418
[2025-11-25 15:33:18] 2025-11-25 20:32:26,042 | INFO     | current memory leak: 9.37 B/s (using 879 data points, chi2=0.12)
[2025-11-25 15:33:18] 2025-11-25 20:32:26,042 | INFO     | could have reported an average CPU frequency of 3318 MHz (34 samples)
[2025-11-25 15:33:18] 2025-11-25 20:32:26,042 | INFO     | ..............................
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . Timing measurements:
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . get job = 0 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . initial setup = 3 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . payload setup = 8 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . stage-in = 0 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . payload execution = 55810 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . stage-out = 3 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | . log creation = 0 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,043 | INFO     | ..............................
[2025-11-25 15:33:18] 2025-11-25 20:32:26,148 | INFO     | 
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | job summary report
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | --------------------------------------------------
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | PanDA job id: 6895365717
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | task id: 47556149
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | errors: (none)
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | pilot state: finished 
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | transexitcode: 0
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | exeerrorcode: 0
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | exeerrordiag: 
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | exitcode: 0
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | exitmsg: OK
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | cpuconsumptiontime: 194836 s
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | nevents: 1000
[2025-11-25 15:33:18] 2025-11-25 20:32:26,149 | INFO     | neventsw: 0
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | pid: 2013929
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | pgrp: 2013929
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | corecount: 9
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | event service: False
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | sizes: {0: 2284259, 7: 2284521, 11: 2284549, 55823: 2334581, 55824: 2334580, 55827: 2343635, 55829: 2343819, 55838: 2344093}
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | --------------------------------------------------
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | 
[2025-11-25 15:33:18] 2025-11-25 20:32:26,150 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-25 15:33:18] 2025-11-25 20:32:26,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:33:18] 2025-11-25 20:32:26,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:33:18] 2025-11-25 20:32:26,195 | INFO     | job 6895365717 has completed (purged errors)
[2025-11-25 15:33:18] 2025-11-25 20:32:26,195 | INFO     | overall cleanup function is called
[2025-11-25 15:33:18] 2025-11-25 20:32:26,882 | INFO     | number of running child processes to parent process 2013929: 1
[2025-11-25 15:33:18] 2025-11-25 20:32:26,882 | INFO     | maximum number of monitored processes: 17
[2025-11-25 15:33:18] 2025-11-25 20:32:26,882 | INFO     | aborting job monitoring since job object (job id=6895365717) has expired
[2025-11-25 15:33:18] 2025-11-25 20:32:27,218 | INFO     | --- collectZombieJob: --- 10, [2013929]
[2025-11-25 15:33:18] 2025-11-25 20:32:27,218 | INFO     | zombie collector waiting for pid 2013929
[2025-11-25 15:33:18] 2025-11-25 20:32:27,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:33:18] 2025-11-25 20:32:27,219 | INFO     | collected zombie processes
[2025-11-25 15:33:18] 2025-11-25 20:32:27,219 | INFO     | will attempt to kill all subprocesses of pid=2013929
[2025-11-25 15:33:18] 2025-11-25 20:32:28,203 | INFO     | process IDs to be killed: [2013929] (in reverse order)
[2025-11-25 15:33:18] 2025-11-25 20:32:28,473 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:33:18] 2025-11-25 20:32:28,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:33:18] 2025-11-25 20:32:28,507 | INFO     | did not find any defunct processes belonging to 2013929
[2025-11-25 15:33:18] 2025-11-25 20:32:28,542 | INFO     | did not find any defunct processes belonging to 2013929
[2025-11-25 15:33:18] 2025-11-25 20:32:28,545 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:33:18] 2025-11-25 20:32:28,546 | INFO     | ready for new job
[2025-11-25 15:33:18] 2025-11-25 20:32:28,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:33:18] 2025-11-25 20:32:28,551 | INFO     | ***************************************
[2025-11-25 15:33:18] 2025-11-25 20:32:28,551 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:33:18] 2025-11-25 20:32:28,551 | INFO     | ***************************************
[2025-11-25 15:33:18] 2025-11-25 20:32:28,551 | INFO     | 
[2025-11-25 15:33:18] 2025-11-25 20:32:28,556 | INFO     | architecture information:
[2025-11-25 15:33:18] 2025-11-25 20:32:28,556 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:33:18] 2025-11-25 20:32:28,582 | INFO     | cat /etc/os-release:
[2025-11-25 15:33:18] NAME="CentOS Linux"
[2025-11-25 15:33:18] VERSION="7 (Core)"
[2025-11-25 15:33:18] ID="centos"
[2025-11-25 15:33:18] ID_LIKE="rhel fedora"
[2025-11-25 15:33:18] VERSION_ID="7"
[2025-11-25 15:33:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:33:18] ANSI_COLOR="0;31"
[2025-11-25 15:33:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:33:18] HOME_URL="https://www.centos.org/"
[2025-11-25 15:33:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:33:18] 
[2025-11-25 15:33:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:33:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:33:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:33:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:33:18] 
[2025-11-25 15:33:18] 2025-11-25 20:32:28,582 | INFO     | ***************************************
[2025-11-25 15:33:18] 2025-11-25 20:32:29,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-25 15:33:18] 2025-11-25 20:32:29,104 | INFO     | sufficient remaining disk space (64813531136 B)
[2025-11-25 15:33:18] 2025-11-25 20:32:29,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:33:18] 2025-11-25 20:32:29,104 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:33:18] 2025-11-25 20:32:29,105 | INFO     | update_server=False
[2025-11-25 15:33:18] 2025-11-25 20:32:29,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:33:18] 2025-11-25 20:32:29,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:33:18] 2025-11-25 20:32:29,396 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 15:33:18] 2025-11-25 20:32:29,397 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 15:33:18] 2025-11-25 20:32:29,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:33:18] 2025-11-25 20:32:29,397 | INFO     | will abort loop
[2025-11-25 15:33:18] 2025-11-25 20:32:30,040 | INFO     | all data control threads have been joined
[2025-11-25 15:33:18] 2025-11-25 20:32:30,044 | INFO     | all payload control threads have been joined
[2025-11-25 15:33:18] 2025-11-25 20:32:30,112 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:30,208 | INFO     | [job] validate thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:30,299 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:30,402 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:30,500 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:30,544 | INFO     | all job control threads have been joined
[2025-11-25 15:33:18] 2025-11-25 20:32:30,578 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:30,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:31,050 | INFO     | [data] control thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:31,068 | INFO     | [payload] control thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:31,112 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:31,150 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:31,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:33:18] 2025-11-25 20:32:31,181 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:31,224 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:31,552 | INFO     | [job] control thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:32,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:33:18] 2025-11-25 20:32:32,163 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:36,097 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:33:18] 2025-11-25 20:32:58,553 | INFO     | PID=1999276 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 15:33:18] 2025-11-25 20:32:58,553 | INFO     | .. there are 89 such processes running
[2025-11-25 15:33:18] 2025-11-25 20:32:58,553 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:33:18] 2025-11-25 20:32:58,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:33:18] 2025-11-25 20:32:58,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:33:18] 2025-11-25 20:33:11,854 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:33:18] 2025-11-25 20:33:12,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110010566464)>', '<ExcThread(monitor, started 140109508749056)>']
[2025-11-25 15:33:18] 2025-11-25 20:33:13,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:33:18] 2025-11-25 20:33:13,651 | INFO     | [monitor] control thread has ended
[2025-11-25 15:33:18] 2025-11-25 20:33:17,886 | INFO     | all workflow threads have been joined
[2025-11-25 15:33:18] 2025-11-25 20:33:17,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:33:18] 2025-11-25 20:33:17,887 | INFO     | traces error code: 0
[2025-11-25 15:33:18] 2025-11-25 20:33:17,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:33:18] 2025-11-25 20:33:18,325 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:33:18] 2025-11-25 20:33:18,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:33:18] 2025-11-25 20:33:18,334 [wrapper] pilotpid: 1999276
[2025-11-25 15:33:18] 2025-11-25 20:33:18,336 [wrapper] Pilot exit status: 0
[2025-11-25 15:33:18] 2025-11-25 20:33:18,356 [wrapper] pandaids: 6895365717
[2025-11-25 15:33:18] 2025-11-25 20:33:18,542 [wrapper] cleanup supervisor_pilot 2190374 1999277
[2025-11-25 15:33:18] 2025-11-25 20:33:18,549 [wrapper] Test setup, not cleaning
[2025-11-25 15:33:18] 2025-11-25 20:33:18,561 [wrapper] apfmon messages muted
[2025-11-25 15:33:18] 2025-11-25 20:33:18,571 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:33:18] 2025-11-25 20:33:18,577 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:33:18]  *** Error codes and diagnostics ***
[2025-11-25 15:33:18]     "exeErrorCode": 0,
[2025-11-25 15:33:18]     "exeErrorDiag": "",
[2025-11-25 15:33:18]     "pilotErrorCode": 0,
[2025-11-25 15:33:18]     "pilotErrorDiag": "",
[2025-11-25 15:33:18]  *** Listing of results directory ***
[2025-11-25 15:33:18] total 1320720
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 12:39 pilot3.tar.gz
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 12:48 queuedata.json
[2025-11-25 15:33:18] -rwx------. 1 boincer umatlas     36292 Nov 23 12:49 runpilot2-wrapper.sh
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:33:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:01 run_atlas
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:01 job.xml
[2025-11-25 15:33:18] -rw-r--r--. 2 boincer umatlas 408565950 Nov 25 00:01 EVNT.47483658._001180.pool.root.1
[2025-11-25 15:33:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 15:33:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:01 shared
[2025-11-25 15:33:18] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 00:01 input.tar.gz
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:01 boinc_lockfile
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:01 pandaJob.out
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas        57 Nov 25 00:01 setup.sh.local
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas    991801 Nov 25 00:01 agis_schedconf.cvmfs.json
[2025-11-25 15:33:18] drwx------. 5 boincer umatlas      4096 Nov 25 00:01 pilot3
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas       533 Nov 25 15:18 boinc_task_state.xml
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas      6946 Nov 25 15:27 init_data.xml
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas 922478700 Nov 25 15:31 HITS.47556149._001669.pool.root.1
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas      1073 Nov 25 15:32 memory_monitor_summary.json
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas   1516240 Nov 25 15:32 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas   2150593 Nov 25 15:32 log.47556149._001669.job.log.tgz.1
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas        95 Nov 25 15:32 pilot_heartbeat.json
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas      8628 Nov 25 15:32 heartbeat.json
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 15:33 boinc_mmap_file
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas        29 Nov 25 15:33 wrapper_checkpoint.txt
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas      5010 Nov 25 15:33 pilotlog.txt
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas   6571861 Nov 25 15:33 log.47556149._001669.job.log.1
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas       353 Nov 25 15:33 output.list
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas       620 Nov 25 15:33 runtime_log
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas   8744960 Nov 25 15:33 result.tar.gz
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas      9338 Nov 25 15:33 runtime_log.err
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas       664 Nov 25 15:33 rM0NDm2NTh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp4KKDml32DRm.diag
[2025-11-25 15:33:18] -rw-r--r--. 1 boincer umatlas     21580 Nov 25 15:33 stderr.txt
[2025-11-25 15:33:18] HITS file was successfully produced:
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas 922478700 Nov 25 15:31 shared/HITS.pool.root.1
[2025-11-25 15:33:18]  *** Contents of shared directory: ***
[2025-11-25 15:33:18] total 1308996
[2025-11-25 15:33:18] -rw-r--r--. 2 boincer umatlas 408565950 Nov 25 00:01 ATLAS.root_0
[2025-11-25 15:33:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:01 start_atlas.sh
[2025-11-25 15:33:18] -rw-r--r--. 2 boincer umatlas    590103 Nov 25 00:01 input.tar.gz
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas 922478700 Nov 25 15:31 HITS.pool.root.1
[2025-11-25 15:33:18] -rw-------. 1 boincer umatlas   8744960 Nov 25 15:33 result.tar.gz
15:33:19 (1995183): run_atlas exited; CPU time 196093.092253
15:33:19 (1995183): called boinc_finish(0)

</stderr_txt>
]]>

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