Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:15:43 (3068313): wrapper (7.7.26015): starting
20:15:43 (3068313): wrapper: running run_atlas (--nthreads 11)
[2025-11-25 20:15:43] Arguments: --nthreads 11
[2025-11-25 20:15:43] Threads: 11
[2025-11-25 20:15:43] Checking for CVMFS
[2025-11-25 20:15:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:15:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:15:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:15:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:15:43] 2.13.3.0 9863 29243 307324 153304 2 82 27528230 32935937 19471 16776704 0 164583850 99.798 87878070 33465 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:15:43] CVMFS is ok
[2025-11-25 20:15:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:15:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:15:43] Further information can be found at the LHC@home message board.
[2025-11-25 20:15:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:15:43] Checking for apptainer binary...
[2025-11-25 20:15:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:15:43] Running /usr/bin/apptainer --version
[2025-11-25 20:15:43] apptainer version 1.4.4-1.el9
[2025-11-25 20:15:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:15:43] c-5-3.aglt2.org
[2025-11-25 20:15:43] apptainer works
[2025-11-25 20:15:43] Set ATHENA_PROC_NUMBER=11
[2025-11-25 20:15:43] Set ATHENA_CORE_NUMBER=11
[2025-11-25 20:15:43] Starting ATLAS job with PandaID=6893850354
[2025-11-25 20:15:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 04:14:47]  *** The last 200 lines of the pilot log: ***
[2025-11-26 04:14:47] 2025-11-26 09:13:46,393 | INFO     | sum of square deviations: 32194031987.287155
[2025-11-26 04:14:47] 2025-11-26 09:13:46,398 | INFO     | sum of deviations: 413434021398.0739
[2025-11-26 04:14:47] 2025-11-26 09:13:46,399 | INFO     | mean x: 1764134078.4787233
[2025-11-26 04:14:47] 2025-11-26 09:13:46,399 | INFO     | mean y: 3418635.2574468087
[2025-11-26 04:14:47] 2025-11-26 09:13:46,399 | INFO     | intersect: -22651495997.33198
[2025-11-26 04:14:47] 2025-11-26 09:13:46,400 | INFO     | chi2: 5.278635982153096
[2025-11-26 04:14:47] 2025-11-26 09:13:46,401 | INFO     | sum of square deviations: 31177604384.946407
[2025-11-26 04:14:47] 2025-11-26 09:13:46,406 | INFO     | sum of deviations: 593288568820.3982
[2025-11-26 04:14:47] 2025-11-26 09:13:46,407 | INFO     | mean x: 1764133925.9892473
[2025-11-26 04:14:47] 2025-11-26 09:13:46,407 | INFO     | mean y: 3445589.6795698926
[2025-11-26 04:14:47] 2025-11-26 09:13:46,407 | INFO     | intersect: -33566821042.57727
[2025-11-26 04:14:47] 2025-11-26 09:13:46,408 | INFO     | chi2: 2.260761222097492
[2025-11-26 04:14:47] 2025-11-26 09:13:46,408 | INFO     | current chi2=2.260761222097492 (change=57.171488434871144 %)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,408 | INFO     | sum of square deviations: 30182748732.991104
[2025-11-26 04:14:47] 2025-11-26 09:13:46,414 | INFO     | sum of deviations: 653968714642.4779
[2025-11-26 04:14:47] 2025-11-26 09:13:46,414 | INFO     | mean x: 1764133773.4956522
[2025-11-26 04:14:47] 2025-11-26 09:13:46,414 | INFO     | mean y: 3454847.9891304346
[2025-11-26 04:14:47] 2025-11-26 09:13:46,415 | INFO     | intersect: -38219978892.79879
[2025-11-26 04:14:47] 2025-11-26 09:13:46,415 | INFO     | chi2: 1.6448970977869457
[2025-11-26 04:14:47] 2025-11-26 09:13:46,415 | INFO     | current chi2=1.6448970977869457 (change=27.24144939725917 %)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,416 | INFO     | sum of square deviations: 29209204287.9912
[2025-11-26 04:14:47] 2025-11-26 09:13:46,421 | INFO     | sum of deviations: 639149913594.308
[2025-11-26 04:14:47] 2025-11-26 09:13:46,422 | INFO     | mean x: 1764133620.9956043
[2025-11-26 04:14:47] 2025-11-26 09:13:46,422 | INFO     | mean y: 3452523.153846154
[2025-11-26 04:14:47] 2025-11-26 09:13:46,422 | INFO     | intersect: -38598963356.13537
[2025-11-26 04:14:47] 2025-11-26 09:13:46,423 | INFO     | chi2: 1.6415610623973227
[2025-11-26 04:14:47] 2025-11-26 09:13:46,423 | INFO     | current chi2=1.6415610623973227 (change=0.20281119068854442 %)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,423 | INFO     | right removable region: 454
[2025-11-26 04:14:47] 2025-11-26 09:13:46,424 | INFO     | sum of square deviations: 31177380760.89466
[2025-11-26 04:14:47] 2025-11-26 09:13:46,430 | INFO     | sum of deviations: 293189250159.3742
[2025-11-26 04:14:47] 2025-11-26 09:13:46,430 | INFO     | mean x: 1764134230.9849463
[2025-11-26 04:14:47] 2025-11-26 09:13:46,430 | INFO     | mean y: 3436606.7677419353
[2025-11-26 04:14:47] 2025-11-26 09:13:46,431 | INFO     | intersect: -16586321087.429222
[2025-11-26 04:14:47] 2025-11-26 09:13:46,431 | INFO     | chi2: 3.7093636204355525
[2025-11-26 04:14:47] 2025-11-26 09:13:46,431 | INFO     | current chi2=3.7093636204355525 (change=29.728747483690952 %)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,432 | INFO     | sum of square deviations: 30182386456.945683
[2025-11-26 04:14:47] 2025-11-26 09:13:46,438 | INFO     | sum of deviations: 267659404741.761
[2025-11-26 04:14:47] 2025-11-26 09:13:46,438 | INFO     | mean x: 1764134383.4891305
[2025-11-26 04:14:47] 2025-11-26 09:13:46,438 | INFO     | mean y: 3440514.752173913
[2025-11-26 04:14:47] 2025-11-26 09:13:46,438 | INFO     | intersect: -15641020192.247776
[2025-11-26 04:14:47] 2025-11-26 09:13:46,439 | INFO     | chi2: 3.6925498142878554
[2025-11-26 04:14:47] 2025-11-26 09:13:46,439 | INFO     | current chi2=3.6925498142878554 (change=0.45328007357021355 %)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,439 | INFO     | left removable region: 20
[2025-11-26 04:14:47] 2025-11-26 09:13:46,440 | INFO     | sum of square deviations: 25348465936.387165
[2025-11-26 04:14:47] 2025-11-26 09:13:46,445 | INFO     | sum of deviations: 460822537465.6772
[2025-11-26 04:14:47] 2025-11-26 09:13:46,445 | INFO     | mean x: 1764134200.516129
[2025-11-26 04:14:47] 2025-11-26 09:13:46,445 | INFO     | mean y: 3480383.331797235
[2025-11-26 04:14:47] 2025-11-26 09:13:46,446 | INFO     | intersect: -32067604342.34584
[2025-11-26 04:14:47] 2025-11-26 09:13:46,446 | INFO     | chi2: 0.023295927655257117
[2025-11-26 04:14:47] 2025-11-26 09:13:46,447 | INFO     | current memory leak: 18.18 B/s (using 434 data points, chi2=0.02)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,447 | INFO     | could have reported an average CPU frequency of 2614 MHz (19 samples)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | ..............................
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | . Timing measurements:
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | . get job = 0 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | . initial setup = 2 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | . payload setup = 3 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | . stage-in = 0 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | . payload execution = 28642 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,448 | INFO     | . stage-out = 3 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,449 | INFO     | . log creation = 0 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,449 | INFO     | ..............................
[2025-11-26 04:14:47] 2025-11-26 09:13:46,560 | INFO     | 
[2025-11-26 04:14:47] 2025-11-26 09:13:46,560 | INFO     | job summary report
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | --------------------------------------------------
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | PanDA job id: 6893850354
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | task id: 47523449
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | errors: (none)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | pilot state: finished 
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | transexitcode: 0
[2025-11-26 04:14:47] 2025-11-26 09:13:46,561 | INFO     | exeerrorcode: 0
[2025-11-26 04:14:47] 2025-11-26 09:13:46,562 | INFO     | exeerrordiag: 
[2025-11-26 04:14:47] 2025-11-26 09:13:46,562 | INFO     | exitcode: 0
[2025-11-26 04:14:47] 2025-11-26 09:13:46,562 | INFO     | exitmsg: OK
[2025-11-26 04:14:47] 2025-11-26 09:13:46,562 | INFO     | cpuconsumptiontime: 276378 s
[2025-11-26 04:14:47] 2025-11-26 09:13:46,562 | INFO     | nevents: 1000
[2025-11-26 04:14:47] 2025-11-26 09:13:46,562 | INFO     | neventsw: 0
[2025-11-26 04:14:47] 2025-11-26 09:13:46,562 | INFO     | pid: 3078740
[2025-11-26 04:14:47] 2025-11-26 09:13:46,563 | INFO     | pgrp: 3078740
[2025-11-26 04:14:47] 2025-11-26 09:13:46,563 | INFO     | corecount: 11
[2025-11-26 04:14:47] 2025-11-26 09:13:46,563 | INFO     | event service: False
[2025-11-26 04:14:47] 2025-11-26 09:13:46,563 | INFO     | sizes: {0: 2284315, 3: 2284577, 11: 2284605, 28650: 2323606, 28653: 2332600, 28654: 2332656, 28660: 2333030}
[2025-11-26 04:14:47] 2025-11-26 09:13:46,563 | INFO     | --------------------------------------------------
[2025-11-26 04:14:47] 2025-11-26 09:13:46,563 | INFO     | 
[2025-11-26 04:14:47] 2025-11-26 09:13:46,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 04:14:47] 2025-11-26 09:13:46,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 04:14:47] 2025-11-26 09:13:46,585 | INFO     | job 6893850354 has completed (purged errors)
[2025-11-26 04:14:47] 2025-11-26 09:13:46,585 | INFO     | overall cleanup function is called
[2025-11-26 04:14:47] 2025-11-26 09:13:47,605 | INFO     | --- collectZombieJob: --- 10, [3078740]
[2025-11-26 04:14:47] 2025-11-26 09:13:47,606 | INFO     | zombie collector waiting for pid 3078740
[2025-11-26 04:14:47] 2025-11-26 09:13:47,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 04:14:47] 2025-11-26 09:13:47,606 | INFO     | collected zombie processes
[2025-11-26 04:14:47] 2025-11-26 09:13:47,607 | INFO     | will attempt to kill all subprocesses of pid=3078740
[2025-11-26 04:14:47] 2025-11-26 09:13:47,783 | INFO     | PID=3072300 has CPU usage=17.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 04:14:47] 2025-11-26 09:13:47,783 | INFO     | .. there are 42 such processes running
[2025-11-26 04:14:47] 2025-11-26 09:13:48,103 | INFO     | process IDs to be killed: [3078740] (in reverse order)
[2025-11-26 04:14:47] 2025-11-26 09:13:48,229 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 04:14:47] 2025-11-26 09:13:48,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 04:14:47] 2025-11-26 09:13:48,245 | INFO     | did not find any defunct processes belonging to 3078740
[2025-11-26 04:14:47] 2025-11-26 09:13:48,260 | INFO     | did not find any defunct processes belonging to 3078740
[2025-11-26 04:14:47] 2025-11-26 09:13:48,262 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 04:14:47] 2025-11-26 09:13:48,262 | INFO     | ready for new job
[2025-11-26 04:14:47] 2025-11-26 09:13:48,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 04:14:47] 2025-11-26 09:13:48,266 | INFO     | ***************************************
[2025-11-26 04:14:47] 2025-11-26 09:13:48,266 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 04:14:47] 2025-11-26 09:13:48,266 | INFO     | ***************************************
[2025-11-26 04:14:47] 2025-11-26 09:13:48,266 | INFO     | 
[2025-11-26 04:14:47] 2025-11-26 09:13:48,269 | INFO     | architecture information:
[2025-11-26 04:14:47] 2025-11-26 09:13:48,270 | INFO     | executing command: cat /etc/os-release
[2025-11-26 04:14:47] 2025-11-26 09:13:48,286 | INFO     | cat /etc/os-release:
[2025-11-26 04:14:47] NAME="CentOS Linux"
[2025-11-26 04:14:47] VERSION="7 (Core)"
[2025-11-26 04:14:47] ID="centos"
[2025-11-26 04:14:47] ID_LIKE="rhel fedora"
[2025-11-26 04:14:47] VERSION_ID="7"
[2025-11-26 04:14:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 04:14:47] ANSI_COLOR="0;31"
[2025-11-26 04:14:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 04:14:47] HOME_URL="https://www.centos.org/"
[2025-11-26 04:14:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 04:14:47] 
[2025-11-26 04:14:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 04:14:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 04:14:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 04:14:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 04:14:47] 
[2025-11-26 04:14:47] 2025-11-26 09:13:48,286 | INFO     | ***************************************
[2025-11-26 04:14:47] 2025-11-26 09:13:48,789 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 04:14:47] 2025-11-26 09:13:48,800 | INFO     | sufficient remaining disk space (70800900096 B)
[2025-11-26 04:14:47] 2025-11-26 09:13:48,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 04:14:47] 2025-11-26 09:13:48,801 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 04:14:47] 2025-11-26 09:13:48,801 | INFO     | update_server=False
[2025-11-26 04:14:47] 2025-11-26 09:13:48,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 04:14:47] 2025-11-26 09:13:48,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:14:47] 2025-11-26 09:13:48,802 | INFO     | aborting loop
[2025-11-26 04:14:47] 2025-11-26 09:13:49,100 | INFO     | all data control threads have been joined
[2025-11-26 04:14:47] 2025-11-26 09:13:49,281 | INFO     | all job control threads have been joined
[2025-11-26 04:14:47] 2025-11-26 09:13:49,588 | INFO     | all payload control threads have been joined
[2025-11-26 04:14:47] 2025-11-26 09:13:49,806 | INFO     | [job] retrieve thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:49,807 | INFO     | [job] job monitor thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:49,830 | INFO     | [payload] validate_post thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:50,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 04:14:47] 2025-11-26 09:13:50,105 | INFO     | [data] control thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:50,114 | INFO     | [payload] failed_post thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:50,171 | INFO     | [job] validate thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:50,287 | INFO     | [job] control thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:50,476 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:50,594 | INFO     | [payload] control thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:50,954 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:51,069 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:51,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 04:14:47] 2025-11-26 09:13:51,126 | INFO     | [data] copytool_in thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:51,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 04:14:47] 2025-11-26 09:13:52,095 | INFO     | [data] copytool_out thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:52,577 | INFO     | [job] queue monitor thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:55,096 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:13:58,938 | INFO     | job.realtimelogging is not enabled
[2025-11-26 04:14:47] 2025-11-26 09:13:59,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 04:14:47] 2025-11-26 09:14:20,465 | INFO     | PID=3072300 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 04:14:47] 2025-11-26 09:14:20,465 | INFO     | .. there are 42 such processes running
[2025-11-26 04:14:47] 2025-11-26 09:14:20,465 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 04:14:47] 2025-11-26 09:14:20,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 04:14:47] 2025-11-26 09:14:20,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 04:14:47] 2025-11-26 09:14:40,977 | INFO     | [monitor] cgroup control has ended
[2025-11-26 04:14:47] 2025-11-26 09:14:41,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647889217344)>', '<ExcThread(monitor, started 140647386294016)>']
[2025-11-26 04:14:47] 2025-11-26 09:14:42,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 04:14:47] 2025-11-26 09:14:42,569 | INFO     | [monitor] control thread has ended
[2025-11-26 04:14:47] 2025-11-26 09:14:46,800 | INFO     | all workflow threads have been joined
[2025-11-26 04:14:47] 2025-11-26 09:14:46,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 04:14:47] 2025-11-26 09:14:46,801 | INFO     | traces error code: 0
[2025-11-26 04:14:47] 2025-11-26 09:14:46,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 04:14:47] 2025-11-26 09:14:46,973 [wrapper] ==== pilot stdout END ====
[2025-11-26 04:14:47] 2025-11-26 09:14:46,976 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 04:14:47] 2025-11-26 09:14:46,978 [wrapper] pilotpid: 3072300
[2025-11-26 04:14:47] 2025-11-26 09:14:46,981 [wrapper] Pilot exit status: 0
[2025-11-26 04:14:47] 2025-11-26 09:14:46,991 [wrapper] pandaids: 6893850354
[2025-11-26 04:14:47] 2025-11-26 09:14:47,082 [wrapper] cleanup supervisor_pilot  551969 3072301
[2025-11-26 04:14:47] 2025-11-26 09:14:47,085 [wrapper] Test setup, not cleaning
[2025-11-26 04:14:47] 2025-11-26 09:14:47,088 [wrapper] apfmon messages muted
[2025-11-26 04:14:47] 2025-11-26 09:14:47,090 [wrapper] ==== wrapper stdout END ====
[2025-11-26 04:14:47] 2025-11-26 09:14:47,092 [wrapper] ==== wrapper stderr END ====
[2025-11-26 04:14:47]  *** Error codes and diagnostics ***
[2025-11-26 04:14:47]     "exeErrorCode": 0,
[2025-11-26 04:14:47]     "exeErrorDiag": "",
[2025-11-26 04:14:47]     "pilotErrorCode": 0,
[2025-11-26 04:14:47]     "pilotErrorDiag": "",
[2025-11-26 04:14:47]  *** Listing of results directory ***
[2025-11-26 04:14:47] total 1309584
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-26 04:14:47] -rwx------. 1 boincer umatlas     36292 Nov 20 06:23 runpilot2-wrapper.sh
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:23 queuedata.json
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 04:14:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:15 run_atlas
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:15 job.xml
[2025-11-26 04:14:47] -rw-r--r--. 2 boincer umatlas 410572758 Nov 25 20:15 EVNT.47493127._000331.pool.root.1
[2025-11-26 04:14:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:15 start_atlas.sh
[2025-11-26 04:14:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:15 shared
[2025-11-26 04:14:47] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 20:15 input.tar.gz
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:15 boinc_lockfile
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 20:15 pandaJob.out
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas        57 Nov 25 20:15 setup.sh.local
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas    991877 Nov 25 20:15 agis_schedconf.cvmfs.json
[2025-11-26 04:14:47] drwx------. 5 boincer umatlas      4096 Nov 25 20:15 pilot3
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas       532 Nov 26 04:02 boinc_task_state.xml
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas      6706 Nov 26 04:09 init_data.xml
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas 914433692 Nov 26 04:12 HITS.47523449._003306.pool.root.1
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas      1056 Nov 26 04:13 memory_monitor_summary.json
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas   1516240 Nov 26 04:13 agis_ddmendpoints.agis.ALL.json
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas   2083211 Nov 26 04:13 log.47523449._003306.job.log.tgz.1
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas        95 Nov 26 04:13 pilot_heartbeat.json
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas      8616 Nov 26 04:13 heartbeat.json
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 04:14 boinc_mmap_file
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas        29 Nov 26 04:14 wrapper_checkpoint.txt
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas      4896 Nov 26 04:14 pilotlog.txt
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas   3959643 Nov 26 04:14 log.47523449._003306.job.log.1
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas       353 Nov 26 04:14 output.list
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas       620 Nov 26 04:14 runtime_log
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas   6062080 Nov 26 04:14 result.tar.gz
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas       657 Nov 26 04:14 zOkMDmtvHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqWGKDmPY1Kxm.diag
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas      9330 Nov 26 04:14 runtime_log.err
[2025-11-26 04:14:47] -rw-r--r--. 1 boincer umatlas     21251 Nov 26 04:14 stderr.txt
[2025-11-26 04:14:47] HITS file was successfully produced:
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas 914433692 Nov 26 04:12 shared/HITS.pool.root.1
[2025-11-26 04:14:47]  *** Contents of shared directory: ***
[2025-11-26 04:14:47] total 1300480
[2025-11-26 04:14:47] -rw-r--r--. 2 boincer umatlas 410572758 Nov 25 20:15 ATLAS.root_0
[2025-11-26 04:14:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:15 start_atlas.sh
[2025-11-26 04:14:47] -rw-r--r--. 2 boincer umatlas    590100 Nov 25 20:15 input.tar.gz
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas 914433692 Nov 26 04:12 HITS.pool.root.1
[2025-11-26 04:14:47] -rw-------. 1 boincer umatlas   6062080 Nov 26 04:14 result.tar.gz
04:14:48 (3068313): run_atlas exited; CPU time 276980.965568
04:14:48 (3068313): called boinc_finish(0)

</stderr_txt>
]]>

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