Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:14 (2746590): wrapper (7.7.26015): starting
04:00:14 (2746590): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 04:00:14] Arguments: --nthreads 3
[2025-11-25 04:00:14] Threads: 3
[2025-11-25 04:00:14] Checking for CVMFS
[2025-11-25 04:00:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:00:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:00:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:00:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:00:14] 2.9.2.0 2683671 13 51636 153266 2 88 35090476 36864000 0 130560 0 187820 99.999 1293 21915 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 04:00:14] CVMFS is ok
[2025-11-25 04:00:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:00:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:00:14] Further information can be found at the LHC@home message board.
[2025-11-25 04:00:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:00:14] Checking for apptainer binary...
[2025-11-25 04:00:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:00:14] Running /usr/bin/apptainer --version
[2025-11-25 04:00:14] apptainer version 1.4.1-1.1
[2025-11-25 04:00:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:00:14] thA335
[2025-11-25 04:00:14] apptainer works
[2025-11-25 04:00:14] Set ATHENA_PROC_NUMBER=3
[2025-11-25 04:00:14] Set ATHENA_CORE_NUMBER=3
[2025-11-25 04:00:14] Starting ATLAS job with PandaID=6895383096
[2025-11-25 04:00:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:04:33]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:04:33] 2025-11-25 03:03:45,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:04:33] 2025-11-25 03:03:45,745 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:04:33] 2025-11-25 03:03:45,745 | INFO     | update_server=False
[2025-11-25 04:04:33] 2025-11-25 03:03:45,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:04:33] 2025-11-25 03:03:45,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:04:33] 2025-11-25 03:03:45,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:04:33] 2025-11-25 03:03:45,746 | INFO     | aborting loop
[2025-11-25 04:04:33] 2025-11-25 03:03:46,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:04:33] 2025-11-25 03:03:46,326 | INFO     | all job control threads have been joined
[2025-11-25 04:04:33] 2025-11-25 03:03:46,425 | INFO     | all data control threads have been joined
[2025-11-25 04:04:33] 2025-11-25 03:03:46,751 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:46,752 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:46,753 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:46,900 | INFO     | all payload control threads have been joined
[2025-11-25 04:04:33] 2025-11-25 03:03:46,980 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,120 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,332 | INFO     | [job] control thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,431 | INFO     | [data] control thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,751 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,815 | INFO     | [job] validate thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,905 | INFO     | [payload] control thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,906 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,916 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:47,969 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:48,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:48,317 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:03:48,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:04:33] 2025-11-25 03:03:52,504 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:04:33] 2025-11-25 03:04:15,490 | INFO     | PID=2750325 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 04:04:33] 2025-11-25 03:04:15,490 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:04:33] 2025-11-25 03:04:15,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:04:33] 2025-11-25 03:04:15,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:04:33] 2025-11-25 03:04:26,618 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:04:33] 2025-11-25 03:04:28,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507634599744)>', '<ExcThread(monitor, started 140507120375552)>']
[2025-11-25 04:04:33] 2025-11-25 03:04:28,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:04:33] 2025-11-25 03:04:28,559 | INFO     | [monitor] control thread has ended
[2025-11-25 04:04:33] 2025-11-25 03:04:33,354 | INFO     | all workflow threads have been joined
[2025-11-25 04:04:33] 2025-11-25 03:04:33,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:04:33] 2025-11-25 03:04:33,355 | INFO     | traces error code: 0
[2025-11-25 04:04:33] 2025-11-25 03:04:33,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:04:33] 2025-11-25 03:04:33,404 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:04:33] 2025-11-25 03:04:33,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:04:33] 2025-11-25 03:04:33,410 [wrapper] pilotpid: 2750325
[2025-11-25 04:04:33] 2025-11-25 03:04:33,412 [wrapper] Pilot exit status: 0
[2025-11-25 04:04:33] 2025-11-25 03:04:33,419 [wrapper] pandaids: 6895383096
[2025-11-25 04:04:33] 2025-11-25 03:04:33,436 [wrapper] cleanup supervisor_pilot 2750331 2750326
[2025-11-25 04:04:33] 2025-11-25 03:04:33,438 [wrapper] Test setup, not cleaning
[2025-11-25 04:04:33] 2025-11-25 03:04:33,441 [wrapper] apfmon messages muted
[2025-11-25 04:04:33] 2025-11-25 03:04:33,443 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:04:33] 2025-11-25 03:04:33,446 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:04:33]  *** Error codes and diagnostics ***
[2025-11-25 04:04:33]     "exeErrorCode": 65,
[2025-11-25 04:04:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 04:04:33]     "pilotErrorCode": 1305,
[2025-11-25 04:04:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 04:04:33]  *** Listing of results directory ***
[2025-11-25 04:04:33] total 404024
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc    576529 Nov 24 04:19 pilot3.tar.gz
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc      5112 Nov 24 04:56 queuedata.json
[2025-11-25 04:04:33] -rwx------ 1 boinc boinc     36292 Nov 24 04:58 runpilot2-wrapper.sh
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc       100 Nov 25 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:04:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 04:00 run_atlas
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc       105 Nov 25 04:00 job.xml
[2025-11-25 04:04:33] -rw-r--r-- 2 boinc boinc 409531122 Nov 25 04:00 EVNT.47483658._001003.pool.root.1
[2025-11-25 04:04:33] -rw-r--r-- 2 boinc boinc    590105 Nov 25 04:00 input.tar.gz
[2025-11-25 04:04:33] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:00 start_atlas.sh
[2025-11-25 04:04:33] drwxrwx--x 2 boinc boinc      4096 Nov 25 04:00 shared
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:00 boinc_setup_complete
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc      6196 Nov 25 04:00 init_data.xml
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc         0 Nov 25 04:00 boinc_lockfile
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc      2782 Nov 25 04:00 pandaJob.out
[2025-11-25 04:04:33] -rw------- 1 boinc boinc    991801 Nov 25 04:00 agis_schedconf.cvmfs.json
[2025-11-25 04:04:33] -rw------- 1 boinc boinc   1516227 Nov 25 04:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:04:33] drwx------ 5 boinc boinc      4096 Nov 25 04:00 pilot3
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc       524 Nov 25 04:01 boinc_task_state.xml
[2025-11-25 04:04:33] -rw------- 1 boinc boinc       951 Nov 25 04:01 memory_monitor_summary.json
[2025-11-25 04:04:33] -rw------- 1 boinc boinc     54377 Nov 25 04:01 log.47556137._009891.job.log.tgz.1
[2025-11-25 04:04:33] -rw------- 1 boinc boinc        95 Nov 25 04:03 pilot_heartbeat.json
[2025-11-25 04:04:33] -rw------- 1 boinc boinc      8398 Nov 25 04:03 heartbeat.json
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc      8192 Nov 25 04:04 boinc_mmap_file
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc        23 Nov 25 04:04 wrapper_checkpoint.txt
[2025-11-25 04:04:33] -rw------- 1 boinc boinc      4752 Nov 25 04:04 pilotlog.txt
[2025-11-25 04:04:33] -rw------- 1 boinc boinc     93716 Nov 25 04:04 log.47556137._009891.job.log.1
[2025-11-25 04:04:33] -rw------- 1 boinc boinc       186 Nov 25 04:04 output.list
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc       620 Nov 25 04:04 runtime_log
[2025-11-25 04:04:33] -rw------- 1 boinc boinc    163840 Nov 25 04:04 result.tar.gz
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc      8744 Nov 25 04:04 runtime_log.err
[2025-11-25 04:04:33] -rw------- 1 boinc boinc       649 Nov 25 04:04 4S5NDmvtch8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyOLKDm05Nxxm.diag
[2025-11-25 04:04:33] -rw-r--r-- 1 boinc boinc      8016 Nov 25 04:04 stderr.txt
[2025-11-25 04:04:33] No HITS result produced
[2025-11-25 04:04:33]  *** Contents of shared directory: ***
[2025-11-25 04:04:33] total 400696
[2025-11-25 04:04:33] -rw-r--r-- 2 boinc boinc 409531122 Nov 25 04:00 ATLAS.root_0
[2025-11-25 04:04:33] -rw-r--r-- 2 boinc boinc    590105 Nov 25 04:00 input.tar.gz
[2025-11-25 04:04:33] -rw-r--r-- 2 boinc boinc     15847 Nov 25 04:00 start_atlas.sh
[2025-11-25 04:04:33] -rw------- 1 boinc boinc    163840 Nov 25 04:04 result.tar.gz
04:04:35 (2746590): run_atlas exited; CPU time 32.464262
04:04:35 (2746590): called boinc_finish(0)

</stderr_txt>
]]>

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