Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:57:51 (7291): wrapper (7.7.26015): starting
15:57:51 (7291): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 15:57:51] Arguments: --nthreads 8
[2025-11-27 15:57:51] Threads: 8
[2025-11-27 15:57:51] Checking for CVMFS
[2025-11-27 15:57:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:57:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:57:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:57:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:57:54] 2.11.2.0 24698 173765 144584 153368 1 85 12920854 25165824 1288 130560 18 59896720 99.903 28602619 2016 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 15:57:54] CVMFS is ok
[2025-11-27 15:57:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:57:54] Checking for apptainer binary...
[2025-11-27 15:57:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:57:54] Running /usr/bin/apptainer --version
[2025-11-27 15:57:54] apptainer version 1.3.2-1.el7
[2025-11-27 15:57:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:58:09] cg-vwn342.simple-grid.lan
[2025-11-27 15:58:09] apptainer works
[2025-11-27 15:58:09] Set ATHENA_PROC_NUMBER=8
[2025-11-27 15:58:09] Set ATHENA_CORE_NUMBER=8
[2025-11-27 15:58:09] Starting ATLAS job with PandaID=6894237942
[2025-11-27 15:58:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 14:53:09]  *** The last 200 lines of the pilot log: ***
[2025-11-28 14:53:09] 2025-11-28 13:52:10,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 14:53:09] 2025-11-28 13:52:10,038 | INFO     | fitting pss+swap vs Time
[2025-11-28 14:53:09] 2025-11-28 13:52:10,040 | INFO     | sum of square deviations: 746093486041.525
[2025-11-28 14:53:09] 2025-11-28 13:52:10,092 | INFO     | sum of deviations: 4027908176113.1104
[2025-11-28 14:53:09] 2025-11-28 13:52:10,092 | INFO     | mean x: 1764297020.5925374
[2025-11-28 14:53:09] 2025-11-28 13:52:10,092 | INFO     | mean y: 2859893.3902985076
[2025-11-28 14:53:09] 2025-11-28 13:52:10,092 | INFO     | intersect: -9521987230.045334
[2025-11-28 14:53:09] 2025-11-28 13:52:10,094 | INFO     | chi2: 12.287556904242237
[2025-11-28 14:53:09] 2025-11-28 13:52:10,096 | INFO     | sum of square deviations: 737773274220.536
[2025-11-28 14:53:09] 2025-11-28 13:52:10,142 | INFO     | sum of deviations: 4491669007517.482
[2025-11-28 14:53:09] 2025-11-28 13:52:10,142 | INFO     | mean x: 1764296868.0966291
[2025-11-28 14:53:09] 2025-11-28 13:52:10,142 | INFO     | mean y: 2868395.686142322
[2025-11-28 14:53:09] 2025-11-28 13:52:10,142 | INFO     | intersect: -10738422783.31765
[2025-11-28 14:53:09] 2025-11-28 13:52:10,144 | INFO     | chi2: 8.97582720370377
[2025-11-28 14:53:09] 2025-11-28 13:52:10,144 | INFO     | current chi2=8.97582720370377 (change=26.951897161876857 %)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,146 | INFO     | sum of square deviations: 729514994085.4009
[2025-11-28 14:53:09] 2025-11-28 13:52:10,202 | INFO     | sum of deviations: 4574445524120.027
[2025-11-28 14:53:09] 2025-11-28 13:52:10,203 | INFO     | mean x: 1764296715.5992482
[2025-11-28 14:53:09] 2025-11-28 13:52:10,203 | INFO     | mean y: 2869921.8330827067
[2025-11-28 14:53:09] 2025-11-28 13:52:10,203 | INFO     | intersect: -11060205243.62109
[2025-11-28 14:53:09] 2025-11-28 13:52:10,204 | INFO     | chi2: 8.723692319668404
[2025-11-28 14:53:09] 2025-11-28 13:52:10,204 | INFO     | current chi2=8.723692319668404 (change=2.8090434264523854 %)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,205 | INFO     | right removable region: 1329
[2025-11-28 14:53:09] 2025-11-28 13:52:10,206 | INFO     | sum of square deviations: 737772381180.5348
[2025-11-28 14:53:09] 2025-11-28 13:52:10,260 | INFO     | sum of deviations: 3477674213245.3003
[2025-11-28 14:53:09] 2025-11-28 13:52:10,260 | INFO     | mean x: 1764297173.0966291
[2025-11-28 14:53:09] 2025-11-28 13:52:10,260 | INFO     | mean y: 2869976.8891385766
[2025-11-28 14:53:09] 2025-11-28 13:52:10,260 | INFO     | intersect: -8313584989.291437
[2025-11-28 14:53:09] 2025-11-28 13:52:10,262 | INFO     | chi2: 7.797541026075782
[2025-11-28 14:53:09] 2025-11-28 13:52:10,262 | INFO     | current chi2=7.797541026075782 (change=36.541160404443715 %)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,264 | INFO     | sum of square deviations: 729513370506.9993
[2025-11-28 14:53:09] 2025-11-28 13:52:10,311 | INFO     | sum of deviations: 3016379181508.523
[2025-11-28 14:53:09] 2025-11-28 13:52:10,311 | INFO     | mean x: 1764297325.6007519
[2025-11-28 14:53:09] 2025-11-28 13:52:10,311 | INFO     | mean y: 2878494.4736842103
[2025-11-28 14:53:09] 2025-11-28 13:52:10,311 | INFO     | intersect: -7292107366.079797
[2025-11-28 14:53:09] 2025-11-28 13:52:10,313 | INFO     | chi2: 4.77682856108675
[2025-11-28 14:53:09] 2025-11-28 13:52:10,313 | INFO     | current chi2=4.77682856108675 (change=38.73929556622349 %)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,315 | INFO     | sum of square deviations: 721316383354.8342
[2025-11-28 14:53:09] 2025-11-28 13:52:10,361 | INFO     | sum of deviations: 2783908085727.7056
[2025-11-28 14:53:09] 2025-11-28 13:52:10,361 | INFO     | mean x: 1764297478.1033962
[2025-11-28 14:53:09] 2025-11-28 13:52:10,361 | INFO     | mean y: 2882815.199245283
[2025-11-28 14:53:09] 2025-11-28 13:52:10,361 | INFO     | intersect: -6806392737.4744005
[2025-11-28 14:53:09] 2025-11-28 13:52:10,363 | INFO     | chi2: 3.931198192024875
[2025-11-28 14:53:09] 2025-11-28 13:52:10,363 | INFO     | current chi2=3.931198192024875 (change=17.702757347219723 %)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,363 | INFO     | left removable region: 30
[2025-11-28 14:53:09] 2025-11-28 13:52:10,364 | INFO     | sum of square deviations: 679682427882.0361
[2025-11-28 14:53:09] 2025-11-28 13:52:10,409 | INFO     | sum of deviations: 3110220577273.914
[2025-11-28 14:53:09] 2025-11-28 13:52:10,409 | INFO     | mean x: 1764297600.1108544
[2025-11-28 14:53:09] 2025-11-28 13:52:10,409 | INFO     | mean y: 2897207.403387221
[2025-11-28 14:53:09] 2025-11-28 13:52:10,409 | INFO     | intersect: -8070512483.941662
[2025-11-28 14:53:09] 2025-11-28 13:52:10,411 | INFO     | chi2: 0.2249154763545236
[2025-11-28 14:53:09] 2025-11-28 13:52:10,411 | INFO     | current memory leak: 4.58 B/s (using 1299 data points, chi2=0.22)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,412 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | ..............................
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . Timing measurements:
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . get job = 0 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . initial setup = 6 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . payload setup = 128 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . stage-in = 0 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . payload execution = 81885 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . stage-out = 3 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | . log creation = 1 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,413 | INFO     | ..............................
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | 
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | job summary report
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | --------------------------------------------------
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | PanDA job id: 6894237942
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | task id: 47533962
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | errors: (none)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | pilot state: finished 
[2025-11-28 14:53:09] 2025-11-28 13:52:10,516 | INFO     | transexitcode: 0
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | exeerrorcode: 0
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | exeerrordiag: 
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | exitcode: 0
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | exitmsg: OK
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | cpuconsumptiontime: 311769 s
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | nevents: 1000
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | neventsw: 0
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | pid: 17698
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | pgrp: 17698
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | corecount: 8
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | event service: False
[2025-11-28 14:53:09] 2025-11-28 13:52:10,517 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284338, 12: 2284366, 23: 2284394, 34: 2284422, 44: 2284578, 55: 2284606, 66: 2284634, 76: 2284662, 87: 2284718, 94: 2285288, 98
[2025-11-28 14:53:09] 2025-11-28 13:52:10,518 | INFO     | --------------------------------------------------
[2025-11-28 14:53:09] 2025-11-28 13:52:10,518 | INFO     | 
[2025-11-28 14:53:09] 2025-11-28 13:52:10,518 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-28 14:53:09] 2025-11-28 13:52:10,536 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 14:53:09] 2025-11-28 13:52:10,539 | INFO     | job 6894237942 has completed (purged errors)
[2025-11-28 14:53:09] 2025-11-28 13:52:10,539 | INFO     | overall cleanup function is called
[2025-11-28 14:53:09] 2025-11-28 13:52:11,555 | INFO     | --- collectZombieJob: --- 10, [17698]
[2025-11-28 14:53:09] 2025-11-28 13:52:11,556 | INFO     | zombie collector waiting for pid 17698
[2025-11-28 14:53:09] 2025-11-28 13:52:11,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 14:53:09] 2025-11-28 13:52:11,556 | INFO     | collected zombie processes
[2025-11-28 14:53:09] 2025-11-28 13:52:11,556 | INFO     | will attempt to kill all subprocesses of pid=17698
[2025-11-28 14:53:09] 2025-11-28 13:52:11,658 | INFO     | process IDs to be killed: [17698] (in reverse order)
[2025-11-28 14:53:09] 2025-11-28 13:52:11,725 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 14:53:09] 2025-11-28 13:52:11,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 14:53:09] 2025-11-28 13:52:11,728 | INFO     | did not find any defunct processes belonging to 17698
[2025-11-28 14:53:09] 2025-11-28 13:52:11,730 | INFO     | did not find any defunct processes belonging to 17698
[2025-11-28 14:53:09] 2025-11-28 13:52:11,732 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 14:53:09] 2025-11-28 13:52:11,732 | INFO     | ready for new job
[2025-11-28 14:53:09] 2025-11-28 13:52:11,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 14:53:09] 2025-11-28 13:52:11,737 | INFO     | ***************************************
[2025-11-28 14:53:09] 2025-11-28 13:52:11,737 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 14:53:09] 2025-11-28 13:52:11,737 | INFO     | ***************************************
[2025-11-28 14:53:09] 2025-11-28 13:52:11,738 | INFO     | 
[2025-11-28 14:53:09] 2025-11-28 13:52:11,738 | INFO     | pilot is running in a VM
[2025-11-28 14:53:09] 2025-11-28 13:52:11,738 | INFO     | architecture information:
[2025-11-28 14:53:09] 2025-11-28 13:52:11,739 | INFO     | executing command: cat /etc/os-release
[2025-11-28 14:53:09] 2025-11-28 13:52:11,754 | INFO     | cat /etc/os-release:
[2025-11-28 14:53:09] NAME="CentOS Linux"
[2025-11-28 14:53:09] VERSION="7 (Core)"
[2025-11-28 14:53:09] ID="centos"
[2025-11-28 14:53:09] ID_LIKE="rhel fedora"
[2025-11-28 14:53:09] VERSION_ID="7"
[2025-11-28 14:53:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 14:53:09] ANSI_COLOR="0;31"
[2025-11-28 14:53:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 14:53:09] HOME_URL="https://www.centos.org/"
[2025-11-28 14:53:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 14:53:09] 
[2025-11-28 14:53:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 14:53:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 14:53:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 14:53:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 14:53:09] 
[2025-11-28 14:53:09] 2025-11-28 13:52:11,754 | INFO     | ***************************************
[2025-11-28 14:53:09] 2025-11-28 13:52:12,257 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-28 14:53:09] 2025-11-28 13:52:12,352 | INFO     | sufficient remaining disk space (495012806656 B)
[2025-11-28 14:53:09] 2025-11-28 13:52:12,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 14:53:09] 2025-11-28 13:52:12,353 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 14:53:09] 2025-11-28 13:52:12,353 | INFO     | update_server=False
[2025-11-28 14:53:09] 2025-11-28 13:52:12,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 14:53:09] 2025-11-28 13:52:12,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:53:09] 2025-11-28 13:52:12,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 14:53:09] 2025-11-28 13:52:12,817 | INFO     | all job control threads have been joined
[2025-11-28 14:53:09] 2025-11-28 13:52:12,934 | INFO     | all data control threads have been joined
[2025-11-28 14:53:09] 2025-11-28 13:52:13,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:53:09] 2025-11-28 13:52:13,022 | INFO     | aborting loop
[2025-11-28 14:53:09] 2025-11-28 13:52:13,094 | INFO     | all payload control threads have been joined
[2025-11-28 14:53:09] 2025-11-28 13:52:13,358 | INFO     | [job] queue monitor thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:13,360 | INFO     | [job] retrieve thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:13,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 14:53:09] 2025-11-28 13:52:13,712 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:13,822 | INFO     | [job] control thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:13,940 | INFO     | [data] control thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:13,987 | INFO     | [payload] validate_post thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,028 | INFO     | [job] job monitor thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,100 | INFO     | [payload] control thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,180 | INFO     | [job] validate thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,191 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,300 | INFO     | [data] copytool_in thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,550 | INFO     | [payload] failed_post thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,710 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:14,769 | INFO     | [data] copytool_out thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:17,390 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 14:53:09] 2025-11-28 13:52:42,179 | INFO     | PID=11117 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 14:53:09] 2025-11-28 13:52:42,179 | INFO     | .. there are 9 such processes running
[2025-11-28 14:53:09] 2025-11-28 13:52:42,179 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 14:53:09] 2025-11-28 13:52:42,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 14:53:09] 2025-11-28 13:52:42,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 14:53:09] 2025-11-28 13:53:03,744 | INFO     | [monitor] cgroup control has ended
[2025-11-28 14:53:09] 2025-11-28 13:53:04,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778809399104)>', '<ExcThread(monitor, started 139778091640576)>']
[2025-11-28 14:53:09] 2025-11-28 13:53:04,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 14:53:09] 2025-11-28 13:53:04,288 | INFO     | [monitor] control thread has ended
[2025-11-28 14:53:09] 2025-11-28 13:53:09,231 | INFO     | all workflow threads have been joined
[2025-11-28 14:53:09] 2025-11-28 13:53:09,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 14:53:09] 2025-11-28 13:53:09,231 | INFO     | traces error code: 0
[2025-11-28 14:53:09] 2025-11-28 13:53:09,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 14:53:09] 2025-11-28 13:53:09,377 [wrapper] ==== pilot stdout END ====
[2025-11-28 14:53:09] 2025-11-28 13:53:09,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 14:53:09] 2025-11-28 13:53:09,393 [wrapper] pilotpid: 11117
[2025-11-28 14:53:09] 2025-11-28 13:53:09,396 [wrapper] Pilot exit status: 0
[2025-11-28 14:53:09] 2025-11-28 13:53:09,418 [wrapper] pandaids: 6894237942
[2025-11-28 14:53:09] 2025-11-28 13:53:09,463 [wrapper] cleanup supervisor_pilot 15643 11118
[2025-11-28 14:53:09] 2025-11-28 13:53:09,486 [wrapper] Test setup, not cleaning
[2025-11-28 14:53:09] 2025-11-28 13:53:09,492 [wrapper] apfmon messages muted
[2025-11-28 14:53:09] 2025-11-28 13:53:09,495 [wrapper] ==== wrapper stdout END ====
[2025-11-28 14:53:09] 2025-11-28 13:53:09,498 [wrapper] ==== wrapper stderr END ====
[2025-11-28 14:53:09]  *** Error codes and diagnostics ***
[2025-11-28 14:53:09]     "exeErrorCode": 0,
[2025-11-28 14:53:09]     "exeErrorDiag": "",
[2025-11-28 14:53:09]     "pilotErrorCode": 0,
[2025-11-28 14:53:09]     "pilotErrorDiag": "",
[2025-11-28 14:53:09]  *** Listing of results directory ***
[2025-11-28 14:53:09] total 1326564
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc    576529 Nov 24 04:19 pilot3.tar.gz
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc      5112 Nov 24 04:29 queuedata.json
[2025-11-28 14:53:09] -rwx------. 1 boinc boinc     36292 Nov 24 04:30 runpilot2-wrapper.sh
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc       100 Nov 27 15:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 14:53:09] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 15:57 run_atlas
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc       105 Nov 27 15:57 job.xml
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc      6391 Nov 27 15:57 init_data.xml
[2025-11-28 14:53:09] -rw-r--r--. 2 boinc boinc 412001406 Nov 27 15:57 EVNT.47493127._001002.pool.root.1
[2025-11-28 14:53:09] -rw-r--r--. 2 boinc boinc     15847 Nov 27 15:57 start_atlas.sh
[2025-11-28 14:53:09] drwxrwx--x. 2 boinc boinc        68 Nov 27 15:57 shared
[2025-11-28 14:53:09] -rw-r--r--. 2 boinc boinc    590098 Nov 27 15:57 input.tar.gz
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc         0 Nov 27 15:57 boinc_lockfile
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc      2783 Nov 27 15:58 pandaJob.out
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc    991580 Nov 27 16:01 agis_schedconf.cvmfs.json
[2025-11-28 14:53:09] drwx------. 5 boinc boinc      4096 Nov 27 16:01 pilot3
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc       533 Nov 28 14:41 boinc_task_state.xml
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc 915745066 Nov 28 14:51 HITS.47533962._000018.pool.root.1
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc      1032 Nov 28 14:51 memory_monitor_summary.json
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc   1516240 Nov 28 14:51 agis_ddmendpoints.agis.ALL.json
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc   2429051 Nov 28 14:51 log.47533962._000018.job.log.tgz.1
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc        95 Nov 28 14:52 pilot_heartbeat.json
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc      8625 Nov 28 14:52 heartbeat.json
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc      8192 Nov 28 14:52 boinc_mmap_file
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc        29 Nov 28 14:52 wrapper_checkpoint.txt
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc      4884 Nov 28 14:53 pilotlog.txt
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc  10943043 Nov 28 14:53 log.47533962._000018.job.log.1
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc       353 Nov 28 14:53 output.list
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc       620 Nov 28 14:53 runtime_log
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc  13393920 Nov 28 14:53 result.tar.gz
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc       662 Nov 28 14:53 Wq3NDmOSch8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGOLKDm6cDbQo.diag
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc      8817 Nov 28 14:53 runtime_log.err
[2025-11-28 14:53:09] -rw-r--r--. 1 boinc boinc     20817 Nov 28 14:53 stderr.txt
[2025-11-28 14:53:09] HITS file was successfully produced:
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc 915745066 Nov 28 14:51 shared/HITS.pool.root.1
[2025-11-28 14:53:09]  *** Contents of shared directory: ***
[2025-11-28 14:53:09] total 1310308
[2025-11-28 14:53:09] -rw-r--r--. 2 boinc boinc 412001406 Nov 27 15:57 ATLAS.root_0
[2025-11-28 14:53:09] -rw-r--r--. 2 boinc boinc     15847 Nov 27 15:57 start_atlas.sh
[2025-11-28 14:53:09] -rw-r--r--. 2 boinc boinc    590098 Nov 27 15:57 input.tar.gz
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc 915745066 Nov 28 14:51 HITS.pool.root.1
[2025-11-28 14:53:09] -rw-------. 1 boinc boinc  13393920 Nov 28 14:53 result.tar.gz
14:53:10 (7291): run_atlas exited; CPU time 312305.938958
14:53:10 (7291): called boinc_finish(0)

</stderr_txt>
]]>

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